RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 CLEC5AQ9NY25 188 aa10.4□□□□□ -0.75
PTPN7-217ENST00000495688 HRNRQ86YZ3 2850 aaPredicted RBP10.39□□□□□ -0.75
PTPN7-217ENST00000495688 FAM181BA6NEQ2 426 aa10.39□□□□□ -0.75
PTPN7-217ENST00000495688 GP9P14770 177 aa10.39□□□□□ -0.75
PTPN7-217ENST00000495688 MC5RP33032 325 aa10.39□□□□□ -0.75
PTPN7-217ENST00000495688 RPL27AP46776 148 aaKnown RBP10.39□□□□□ -0.75
PTPN7-217ENST00000495688 FAM71F2Q6NXP2 309 aa10.39□□□□□ -0.75
PTPN7-217ENST00000495688 RASL11AQ6T310 242 aa10.39□□□□□ -0.75
PTPN7-217ENST00000495688 ABHD17AQ96GS6 310 aa10.39□□□□□ -0.75
PTPN7-217ENST00000495688 PGLYRP4Q96LB8 373 aa10.39□□□□□ -0.75
PTPN7-217ENST00000495688 TMEM133Q9H2Q1 129 aa10.39□□□□□ -0.75
PTPN7-217ENST00000495688 GOLT1BQ9Y3E0 138 aa10.39□□□□□ -0.75
PTPN7-217ENST00000495688 KLF12Q9Y4X4 402 aa10.39□□□□□ -0.75
PTPN7-217ENST00000495688 MUC6Q6W4X9 2439 aa10.39□□□□□ -0.75
PTPN7-217ENST00000495688 A0A1B0GXF2 115 aa10.39□□□□□ -0.75
PTPN7-217ENST00000495688 E7EQL1 145 aa10.39□□□□□ -0.75
PTPN7-217ENST00000495688 MRPL52Q86TS9 123 aaKnown RBP10.39□□□□□ -0.75
PTPN7-217ENST00000495688 Q9H3A6 140 aa10.39□□□□□ -0.75
PTPN7-217ENST00000495688 UQCR10Q9UDW1 63 aa10.39□□□□□ -0.75
PTPN7-217ENST00000495688 TP73-AS1Q9UF72 201 aa10.39□□□□□ -0.75
PTPN7-217ENST00000495688 ZNF835Q9Y2P0 537 aa10.39□□□□□ -0.75
PTPN7-217ENST00000495688 LGALS7P47929 136 aa10.38□□□□□ -0.75
PTPN7-217ENST00000495688 SSX8Q7RTT4 187 aa10.38□□□□□ -0.75
PTPN7-217ENST00000495688 C8orf31Q8N9H6 132 aa10.38□□□□□ -0.75
PTPN7-217ENST00000495688 TMEM116Q8NCL8 245 aa10.38□□□□□ -0.75
PTPN7-217ENST00000495688 IGFBPL1Q8WX77 278 aa10.38□□□□□ -0.75
PTPN7-217ENST00000495688 SIGLEC9Q9Y336 463 aa10.38□□□□□ -0.75
PTPN7-217ENST00000495688 OR2J3O76001 311 aa10.38□□□□□ -0.75
PTPN7-217ENST00000495688 TCRAP04437 139 aa10.38□□□□□ -0.75
PTPN7-217ENST00000495688 TRGV9Q99603 122 aa10.38□□□□□ -0.75
PTPN7-217ENST00000495688 RPP21Q9H633 154 aaKnown RBP10.38□□□□□ -0.75
PTPN7-217ENST00000495688 IGHV2-26A0A0B4J1V2 119 aa10.37□□□□□ -0.75
PTPN7-217ENST00000495688 C2orf70A6NJV1 201 aa10.37□□□□□ -0.75
PTPN7-217ENST00000495688 SHISA9B4DS77 424 aa10.37□□□□□ -0.75
PTPN7-217ENST00000495688 PSG1P11464 419 aa10.37□□□□□ -0.75
PTPN7-217ENST00000495688 HNRNPA3P51991 378 aaKnown RBP10.37□□□□□ -0.75
PTPN7-217ENST00000495688 LYZP61626 148 aa10.37□□□□□ -0.75
PTPN7-217ENST00000495688 KLF5Q13887 457 aaPredicted RBP10.37□□□□□ -0.75
PTPN7-217ENST00000495688 PRR30Q53SZ7 412 aaPredicted RBP10.37□□□□□ -0.75
PTPN7-217ENST00000495688 Q6ZVH6 145 aa10.37□□□□□ -0.75
PTPN7-217ENST00000495688 EXOC3-AS1Q8N2X6 119 aa10.37□□□□□ -0.75
PTPN7-217ENST00000495688 CIARTQ8N365 385 aaPredicted RBP10.37□□□□□ -0.75
PTPN7-217ENST00000495688 STXBP6Q8NFX7 210 aa10.37□□□□□ -0.75
PTPN7-217ENST00000495688 FBXL15Q9H469 300 aa10.37□□□□□ -0.75
PTPN7-217ENST00000495688 P01737 135 aa10.37□□□□□ -0.75
PTPN7-217ENST00000495688 COX7A1P24310 79 aa10.37□□□□□ -0.75
PTPN7-217ENST00000495688 COL5A1-AS1Q5SY13 56 aa10.37□□□□□ -0.75
PTPN7-217ENST00000495688 ETFRF1Q6IPR1 90 aa10.37□□□□□ -0.75
PTPN7-217ENST00000495688 LINC00173Q6ZV60 143 aa10.37□□□□□ -0.75
PTPN7-217ENST00000495688 C5orf17Q8NAS9 161 aa10.37□□□□□ -0.75
PTPN7-217ENST00000495688 PRSS22Q9GZN4 317 aa10.37□□□□□ -0.75
PTPN7-217ENST00000495688 LAMTOR2Q9Y2Q5 125 aa10.37□□□□□ -0.75
PTPN7-217ENST00000495688 INSIG2Q9Y5U4 225 aa10.37□□□□□ -0.75
PTPN7-217ENST00000495688 IGHV1-69-2A0A0G2JMI3 117 aa10.36□□□□□ -0.75
PTPN7-217ENST00000495688 LTAP01374 205 aa10.36□□□□□ -0.75
PTPN7-217ENST00000495688 CRYGBP07316 175 aa10.36□□□□□ -0.75
PTPN7-217ENST00000495688 HBBP68871 147 aa10.36□□□□□ -0.75
PTPN7-217ENST00000495688 GFRALQ6UXV0 394 aa10.36□□□□□ -0.75
PTPN7-217ENST00000495688 TEX45Q8NA69 505 aa10.36□□□□□ -0.75
PTPN7-217ENST00000495688 Q8NA96 180 aa10.36□□□□□ -0.75
PTPN7-217ENST00000495688 OR8B3Q8NGG8 313 aa10.36□□□□□ -0.75
PTPN7-217ENST00000495688 C22orf15Q8WYQ4 148 aa10.36□□□□□ -0.75
PTPN7-217ENST00000495688 OR8B2Q96RD0 313 aa10.36□□□□□ -0.75
PTPN7-217ENST00000495688 KAAG1Q9UBP8 84 aa10.36□□□□□ -0.75
PTPN7-217ENST00000495688 MED13LQ71F56 2210 aa10.36□□□□□ -0.75
PTPN7-217ENST00000495688 IGHV1-3A0A0C4DH29 117 aa10.36□□□□□ -0.75
PTPN7-217ENST00000495688 C19orf71A6NCJ1 209 aa10.36□□□□□ -0.75
PTPN7-217ENST00000495688 PRSS47A8MTI9 375 aa10.36□□□□□ -0.75
PTPN7-217ENST00000495688 TEX22C9J3V5 150 aa10.36□□□□□ -0.75
PTPN7-217ENST00000495688 TOMM40O96008 361 aa10.36□□□□□ -0.75
PTPN7-217ENST00000495688 IGLV1-47P01700 117 aa10.36□□□□□ -0.75
PTPN7-217ENST00000495688 PVRIGQ6DKI7 326 aa10.36□□□□□ -0.75
PTPN7-217ENST00000495688 ASCL5Q7RTU5 278 aa10.36□□□□□ -0.75
PTPN7-217ENST00000495688 PPP1R27Q86WC6 154 aa10.36□□□□□ -0.75
PTPN7-217ENST00000495688 C8orf46Q8TAG6 207 aa10.36□□□□□ -0.75
PTPN7-217ENST00000495688 CHRDL1Q9BU40 450 aa10.36□□□□□ -0.75
PTPN7-217ENST00000495688 NDUFB8O95169 186 aa10.35□□□□□ -0.75
PTPN7-217ENST00000495688 IGLL1P15814 213 aa10.35□□□□□ -0.75
PTPN7-217ENST00000495688 CA7P43166 264 aa10.35□□□□□ -0.75
PTPN7-217ENST00000495688 HINT1P49773 126 aaPredicted RBP10.35□□□□□ -0.75
PTPN7-217ENST00000495688 ATP5L2Q7Z4Y8 100 aa10.35□□□□□ -0.75
PTPN7-217ENST00000495688 F11RQ9Y624 299 aaKnown RBP10.35□□□□□ -0.75
PTPN7-217ENST00000495688 ZFHX3Q15911 3703 aa10.35□□□□□ -0.75
PTPN7-217ENST00000495688 A8MWL6 223 aa10.35□□□□□ -0.75
PTPN7-217ENST00000495688 IGLC1P0CG04 106 aa10.35□□□□□ -0.75
PTPN7-217ENST00000495688 TSPOP30536 169 aa10.35□□□□□ -0.75
PTPN7-217ENST00000495688 ZNF138P52744 262 aa10.35□□□□□ -0.75
PTPN7-217ENST00000495688 FMC1Q96HJ9 113 aa10.35□□□□□ -0.75
PTPN7-217ENST00000495688 C17orf77Q96MU5 243 aa10.35□□□□□ -0.75
PTPN7-217ENST00000495688 JKAMPQ9P055 326 aa10.35□□□□□ -0.75
PTPN7-217ENST00000495688 RBP4P02753 201 aa10.34□□□□□ -0.75
PTPN7-217ENST00000495688 FAM120AOSQ5T036 256 aa10.34□□□□□ -0.75
PTPN7-217ENST00000495688 GOLT1AQ6ZVE7 132 aa10.34□□□□□ -0.75
PTPN7-217ENST00000495688 PRNTQ86SH4 94 aa10.34□□□□□ -0.75
PTPN7-217ENST00000495688 HIGD1AQ9Y241 93 aa10.34□□□□□ -0.75
PTPN7-217ENST00000495688 BUB1B-PAK6H3BSN5 160 aa10.34□□□□□ -0.75
PTPN7-217ENST00000495688 GAGE1Q13065 139 aa10.34□□□□□ -0.75
PTPN7-217ENST00000495688 LDLRAD2Q5SZI1 272 aa10.34□□□□□ -0.75
PTPN7-217ENST00000495688 DMRTA1Q5VZB9 504 aa10.34□□□□□ -0.75
PTPN7-217ENST00000495688 SRSF12Q8WXF0 261 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms