RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 M0R2N4 97 aa15.75■□□□□ 0.11
HDDC3-203ENST00000494993 OR2F1Q13607 317 aa15.75■□□□□ 0.11
HDDC3-203ENST00000494993 GSG1LQ6UXU4 331 aa15.75■□□□□ 0.11
HDDC3-203ENST00000494993 PPP1R14BQ96C90 147 aa15.75■□□□□ 0.11
HDDC3-203ENST00000494993 FAM210BQ96KR6 192 aa15.75■□□□□ 0.11
HDDC3-203ENST00000494993 TRGV9Q99603 122 aa15.75■□□□□ 0.11
HDDC3-203ENST00000494993 SLC35B3Q9H1N7 401 aa15.75■□□□□ 0.11
HDDC3-203ENST00000494993 DKK2Q9UBU2 259 aa15.75■□□□□ 0.11
HDDC3-203ENST00000494993 MUC4Q99102 2169 aa15.75■□□□□ 0.11
HDDC3-203ENST00000494993 PRSS29PA6NIE9 313 aa15.74■□□□□ 0.11
HDDC3-203ENST00000494993 ISLRO14498 428 aa15.74■□□□□ 0.11
HDDC3-203ENST00000494993 RTL8CO15255 209 aa15.74■□□□□ 0.11
HDDC3-203ENST00000494993 PITX3O75364 302 aa15.74■□□□□ 0.11
HDDC3-203ENST00000494993 PAX9P55771 341 aa15.74■□□□□ 0.11
HDDC3-203ENST00000494993 FAM222AQ5U5X8 452 aa15.74■□□□□ 0.11
HDDC3-203ENST00000494993 OR8I2Q8N0Y5 310 aa15.74■□□□□ 0.11
HDDC3-203ENST00000494993 RAB2BQ8WUD1 216 aa15.74■□□□□ 0.11
HDDC3-203ENST00000494993 NIPSNAP3BQ9BS92 247 aa15.74■□□□□ 0.11
HDDC3-203ENST00000494993 DYNC1H1Q14204 4646 aaKnown RBP15.74■□□□□ 0.11
HDDC3-203ENST00000494993 PIGBOS1A0A0B4J2F0 54 aa15.73■□□□□ 0.11
HDDC3-203ENST00000494993 DUXBA0A1W2PPF3 345 aa15.73■□□□□ 0.11
HDDC3-203ENST00000494993 F6UB75 175 aa15.73■□□□□ 0.11
HDDC3-203ENST00000494993 IAPPP10997 89 aa15.73■□□□□ 0.11
HDDC3-203ENST00000494993 RAB11AP62491 216 aa15.73■□□□□ 0.11
HDDC3-203ENST00000494993 PSG9Q00887 426 aa15.73■□□□□ 0.11
HDDC3-203ENST00000494993 LGALS9BQ3B8N2 356 aa15.73■□□□□ 0.11
HDDC3-203ENST00000494993 FAM78BQ5VT40 261 aa15.73■□□□□ 0.11
HDDC3-203ENST00000494993 EBLN2Q6P2I7 272 aa15.73■□□□□ 0.11
HDDC3-203ENST00000494993 GOLT1BQ9Y3E0 138 aa15.73■□□□□ 0.11
HDDC3-203ENST00000494993 PKD1P98161 4303 aa15.73■□□□□ 0.11
HDDC3-203ENST00000494993 DNAH11Q96DT5 4516 aa15.72■□□□□ 0.11
HDDC3-203ENST00000494993 IGKV1OR2-108A0A075B7D4 117 aa15.72■□□□□ 0.11
HDDC3-203ENST00000494993 A0A0J9YX75 114 aa15.72■□□□□ 0.11
HDDC3-203ENST00000494993 SAMD13Q5VXD3 122 aa15.72■□□□□ 0.11
HDDC3-203ENST00000494993 C1orf158Q8N1D5 194 aa15.72■□□□□ 0.11
HDDC3-203ENST00000494993 THAP8Q8NA92 274 aa15.72■□□□□ 0.11
HDDC3-203ENST00000494993 SOSTQ9BQB4 213 aa15.72■□□□□ 0.11
HDDC3-203ENST00000494993 BCL7BQ9BQE9 202 aa15.72■□□□□ 0.11
HDDC3-203ENST00000494993 IFNA21P01568 189 aa15.71■□□□□ 0.11
HDDC3-203ENST00000494993 HBE1P02100 147 aa15.71■□□□□ 0.11
HDDC3-203ENST00000494993 MEOX2P50222 304 aa15.71■□□□□ 0.11
HDDC3-203ENST00000494993 TMBIM6P55061 237 aa15.71■□□□□ 0.11
HDDC3-203ENST00000494993 UBE2DNLQ8IWF7 75 aa15.71■□□□□ 0.11
HDDC3-203ENST00000494993 C7orf50Q9BRJ6 194 aaKnown RBP15.71■□□□□ 0.11
HDDC3-203ENST00000494993 RPRMQ9NS64 109 aa15.71■□□□□ 0.11
HDDC3-203ENST00000494993 PAIP2BQ9ULR5 123 aaKnown RBP15.71■□□□□ 0.11
HDDC3-203ENST00000494993 LOC102723971A0A1B0GUV8 181 aa15.7■□□□□ 0.1
HDDC3-203ENST00000494993 FABP12A6NFH5 140 aa15.7■□□□□ 0.1
HDDC3-203ENST00000494993 TNFSF8P32971 234 aa15.7■□□□□ 0.1
HDDC3-203ENST00000494993 OXA1LQ15070 435 aa15.7■□□□□ 0.1
HDDC3-203ENST00000494993 TMED4Q7Z7H5 227 aa15.7■□□□□ 0.1
HDDC3-203ENST00000494993 C16orf92Q96LL3 132 aa15.7■□□□□ 0.1
HDDC3-203ENST00000494993 C20orf173Q96LM9 149 aa15.7■□□□□ 0.1
HDDC3-203ENST00000494993 SLIRPQ9GZT3 109 aaKnown RBP15.7■□□□□ 0.1
HDDC3-203ENST00000494993 PLA2G2EQ9NZK7 142 aa15.7■□□□□ 0.1
HDDC3-203ENST00000494993 A8MTW9 85 aa15.69■□□□□ 0.1
HDDC3-203ENST00000494993 CFDP00746 253 aaPredicted RBP15.69■□□□□ 0.1
HDDC3-203ENST00000494993 SLC25A6P12236 298 aa15.69■□□□□ 0.1
HDDC3-203ENST00000494993 FAUP35544 74 aaKnown RBP15.69■□□□□ 0.1
HDDC3-203ENST00000494993 GALR1P47211 349 aa15.69■□□□□ 0.1
HDDC3-203ENST00000494993 TMEM128Q5BJH2 165 aa15.69■□□□□ 0.1
HDDC3-203ENST00000494993 GGNBP1Q5YKI7 109 aa15.69■□□□□ 0.1
HDDC3-203ENST00000494993 LRTM2Q8N967 370 aa15.69■□□□□ 0.1
HDDC3-203ENST00000494993 SLC25A32Q9H2D1 315 aa15.69■□□□□ 0.1
HDDC3-203ENST00000494993 DOK5Q9P104 306 aa15.69■□□□□ 0.1
HDDC3-203ENST00000494993 SLC45A2Q9UMX9 530 aa15.69■□□□□ 0.1
HDDC3-203ENST00000494993 YTHDF2Q9Y5A9 579 aaKnown RBP15.69■□□□□ 0.1
HDDC3-203ENST00000494993 IGLV2-18A0A075B6J9 118 aa15.68■□□□□ 0.1
HDDC3-203ENST00000494993 MED6O75586 246 aa15.68■□□□□ 0.1
HDDC3-203ENST00000494993 MED14OSP0DP75 135 aa15.68■□□□□ 0.1
HDDC3-203ENST00000494993 HTN3P15516 51 aa15.68■□□□□ 0.1
HDDC3-203ENST00000494993 RRN3P1Q2M238 152 aa15.68■□□□□ 0.1
HDDC3-203ENST00000494993 SLC25A22Q9H936 323 aa15.68■□□□□ 0.1
HDDC3-203ENST00000494993 ZNF98A6NK75 572 aa15.67■□□□□ 0.1
HDDC3-203ENST00000494993 PRSS46E5RG02 174 aa15.67■□□□□ 0.1
HDDC3-203ENST00000494993 VAMP1P23763 118 aa15.67■□□□□ 0.1
HDDC3-203ENST00000494993 Q6ZR54 194 aa15.67■□□□□ 0.1
HDDC3-203ENST00000494993 C17orf77Q96MU5 243 aa15.67■□□□□ 0.1
HDDC3-203ENST00000494993 CIB3Q96Q77 187 aaPredicted RBP15.67■□□□□ 0.1
HDDC3-203ENST00000494993 RSG1Q9BU20 258 aa15.67■□□□□ 0.1
HDDC3-203ENST00000494993 MAGT1Q9H0U3 335 aa15.67■□□□□ 0.1
HDDC3-203ENST00000494993 RPP30P78346 268 aaKnown RBP15.66■□□□□ 0.1
HDDC3-203ENST00000494993 RNF212Q495C1 297 aa15.66■□□□□ 0.1
HDDC3-203ENST00000494993 AMTNQ6UX39 209 aa15.66■□□□□ 0.1
HDDC3-203ENST00000494993 TRIM63Q969Q1 353 aa15.66■□□□□ 0.1
HDDC3-203ENST00000494993 RYR1P21817 5038 aa15.65■□□□□ 0.1
HDDC3-203ENST00000494993 SYNGR2O43760 224 aa15.65■□□□□ 0.1
HDDC3-203ENST00000494993 AP3S2P59780 193 aa15.65■□□□□ 0.1
HDDC3-203ENST00000494993 DAD1P61803 113 aa15.65■□□□□ 0.1
HDDC3-203ENST00000494993 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.65■□□□□ 0.1
HDDC3-203ENST00000494993 BPIFCQ8NFQ6 507 aa15.65■□□□□ 0.1
HDDC3-203ENST00000494993 OR4D5Q8NGN0 318 aa15.65■□□□□ 0.1
HDDC3-203ENST00000494993 MCFD2Q8NI22 146 aa15.65■□□□□ 0.1
HDDC3-203ENST00000494993 IGF2BP2-AS1Q96M15 143 aa15.65■□□□□ 0.1
HDDC3-203ENST00000494993 TMED3Q9Y3Q3 217 aa15.65■□□□□ 0.1
HDDC3-203ENST00000494993 H3BMQ9 156 aa15.64■□□□□ 0.09
HDDC3-203ENST00000494993 WRBO00258 174 aa15.64■□□□□ 0.09
HDDC3-203ENST00000494993 NOL3O60936 208 aaKnown RBP15.64■□□□□ 0.09
HDDC3-203ENST00000494993 GATA2P23769 480 aaPredicted RBP15.64■□□□□ 0.09
HDDC3-203ENST00000494993 TMEM88Q6PEY1 159 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms