RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 TEPPQ6URK8 271 aa12.85□□□□□ -0.35
SNX17-209ENST00000494893 THAP8Q8NA92 274 aa12.85□□□□□ -0.35
SNX17-209ENST00000494893 NPIPB3Q92617 1050 aa12.85□□□□□ -0.35
SNX17-209ENST00000494893 GNPNAT1Q96EK6 184 aaPredicted RBP12.85□□□□□ -0.35
SNX17-209ENST00000494893 SMPXQ9UHP9 88 aa12.85□□□□□ -0.35
SNX17-209ENST00000494893 IGHV3-49A0A0A0MS15 119 aa12.84□□□□□ -0.35
SNX17-209ENST00000494893 IGHV7-4-1A0A0J9YVY3 117 aa12.84□□□□□ -0.35
SNX17-209ENST00000494893 APOHP02749 345 aaPredicted RBP12.84□□□□□ -0.35
SNX17-209ENST00000494893 CD7P09564 240 aa12.84□□□□□ -0.35
SNX17-209ENST00000494893 ATP6V0CP27449 155 aa12.84□□□□□ -0.35
SNX17-209ENST00000494893 GUCA2BQ16661 112 aa12.84□□□□□ -0.35
SNX17-209ENST00000494893 EIF5AL1Q6IS14 154 aaKnown RBP12.84□□□□□ -0.35
SNX17-209ENST00000494893 TEX261Q6UWH6 196 aa12.84□□□□□ -0.35
SNX17-209ENST00000494893 PHYHIPLQ96FC7 376 aa12.84□□□□□ -0.35
SNX17-209ENST00000494893 MGST2Q99735 147 aa12.84□□□□□ -0.35
SNX17-209ENST00000494893 TIMM9Q9Y5J7 89 aa12.84□□□□□ -0.35
SNX17-209ENST00000494893 IGKV1OR2-108A0A075B7D4 117 aa12.83□□□□□ -0.36
SNX17-209ENST00000494893 IGHV3OR16-13A0A075B7E8 117 aa12.83□□□□□ -0.36
SNX17-209ENST00000494893 IGHV3-74A0A0B4J1X5 117 aa12.83□□□□□ -0.36
SNX17-209ENST00000494893 CHEK1O14757 476 aa12.83□□□□□ -0.36
SNX17-209ENST00000494893 FRMD6-AS1P0C7T7 363 aa12.83□□□□□ -0.36
SNX17-209ENST00000494893 SEC11BP0C7V7 166 aa12.83□□□□□ -0.36
SNX17-209ENST00000494893 IGHV4-30-4P0DP06 118 aa12.83□□□□□ -0.36
SNX17-209ENST00000494893 SPP1P10451 314 aa12.83□□□□□ -0.36
SNX17-209ENST00000494893 OR10J1P30954 320 aa12.83□□□□□ -0.36
SNX17-209ENST00000494893 RAB31Q13636 194 aa12.83□□□□□ -0.36
SNX17-209ENST00000494893 ZNF680Q8NEM1 530 aa12.83□□□□□ -0.36
SNX17-209ENST00000494893 PSMG3Q9BT73 122 aaPredicted RBP12.83□□□□□ -0.36
SNX17-209ENST00000494893 RSG1Q9BU20 258 aa12.83□□□□□ -0.36
SNX17-209ENST00000494893 RHPN1-AS1Q9BWJ2 59 aa12.83□□□□□ -0.36
SNX17-209ENST00000494893 NPCDR1Q9BY65 106 aa12.83□□□□□ -0.36
SNX17-209ENST00000494893 WFDC10AQ9H1F0 79 aa12.83□□□□□ -0.36
SNX17-209ENST00000494893 SH3BGRL3Q9H299 93 aa12.83□□□□□ -0.36
SNX17-209ENST00000494893 C19orf73Q9NVV2 129 aa12.83□□□□□ -0.36
SNX17-209ENST00000494893 HUWE1Q7Z6Z7 4374 aaKnown RBP12.83□□□□□ -0.36
SNX17-209ENST00000494893 IGKV1D-37A0A075B6S9 117 aa12.82□□□□□ -0.36
SNX17-209ENST00000494893 TRAV30A0A087WSZ9 112 aa12.82□□□□□ -0.36
SNX17-209ENST00000494893 TRAV25A0A0B4J276 109 aa12.82□□□□□ -0.36
SNX17-209ENST00000494893 AGPAT2O15120 278 aa12.82□□□□□ -0.36
SNX17-209ENST00000494893 CAMLGP49069 296 aa12.82□□□□□ -0.36
SNX17-209ENST00000494893 CD81P60033 236 aa12.82□□□□□ -0.36
SNX17-209ENST00000494893 ZNF709Q8N972 641 aa12.82□□□□□ -0.36
SNX17-209ENST00000494893 TMED6Q8WW62 240 aa12.82□□□□□ -0.36
SNX17-209ENST00000494893 RNF2Q99496 336 aa12.82□□□□□ -0.36
SNX17-209ENST00000494893 TRGV9Q99603 122 aa12.82□□□□□ -0.36
SNX17-209ENST00000494893 ASCL2Q99929 193 aa12.82□□□□□ -0.36
SNX17-209ENST00000494893 SLC25A32Q9H2D1 315 aa12.82□□□□□ -0.36
SNX17-209ENST00000494893 RFNGQ9Y644 331 aa12.82□□□□□ -0.36
SNX17-209ENST00000494893 ZFP92A6NM28 416 aa12.81□□□□□ -0.36
SNX17-209ENST00000494893 A8MZ25 164 aa12.81□□□□□ -0.36
SNX17-209ENST00000494893 C17orf112F2Z3M2 114 aa12.81□□□□□ -0.36
SNX17-209ENST00000494893 IFNA7P01567 189 aa12.81□□□□□ -0.36
SNX17-209ENST00000494893 YPEL3P61236 119 aaPredicted RBP12.81□□□□□ -0.36
SNX17-209ENST00000494893 FAM90A2PQ658T7 463 aa12.81□□□□□ -0.36
SNX17-209ENST00000494893 ALKAL2Q6UX46 152 aa12.81□□□□□ -0.36
SNX17-209ENST00000494893 GTSCR1Q86UQ5 136 aa12.81□□□□□ -0.36
SNX17-209ENST00000494893 SBSPONQ8IVN8 264 aa12.81□□□□□ -0.36
SNX17-209ENST00000494893 OR2G3Q8NGZ4 309 aa12.81□□□□□ -0.36
SNX17-209ENST00000494893 GGTLC1Q9BX51 225 aa12.81□□□□□ -0.36
SNX17-209ENST00000494893 VSIRQ9H7M9 311 aa12.81□□□□□ -0.36
SNX17-209ENST00000494893 SLC45A2Q9UMX9 530 aa12.81□□□□□ -0.36
SNX17-209ENST00000494893 TSPAN4O14817 238 aa12.8□□□□□ -0.36
SNX17-209ENST00000494893 SERF2P84101 59 aa12.8□□□□□ -0.36
SNX17-209ENST00000494893 KCNIP2Q9NS61 270 aa12.8□□□□□ -0.36
SNX17-209ENST00000494893 PLA2G2EQ9NZK7 142 aa12.8□□□□□ -0.36
SNX17-209ENST00000494893 IGHV3-66A0A0C4DH42 116 aa12.79□□□□□ -0.36
SNX17-209ENST00000494893 TOMM40O96008 361 aa12.79□□□□□ -0.36
SNX17-209ENST00000494893 CRYBB3P26998 211 aa12.79□□□□□ -0.36
SNX17-209ENST00000494893 RPL29P47914 159 aaKnown RBP12.79□□□□□ -0.36
SNX17-209ENST00000494893 RBPMS2Q6ZRY4 209 aaKnown RBP12.79□□□□□ -0.36
SNX17-209ENST00000494893 CYP2G1PQ6ZSU1 146 aa12.79□□□□□ -0.36
SNX17-209ENST00000494893 ZNF767PQ75MW2 155 aa12.79□□□□□ -0.36
SNX17-209ENST00000494893 DEFB125Q8N687 156 aa12.79□□□□□ -0.36
SNX17-209ENST00000494893 U3KQE9 123 aa12.79□□□□□ -0.36
SNX17-209ENST00000494893 RGS13O14921 159 aa12.78□□□□□ -0.36
SNX17-209ENST00000494893 LINC00869P0C866 280 aa12.78□□□□□ -0.36
SNX17-209ENST00000494893 PSG1P11464 419 aa12.78□□□□□ -0.36
SNX17-209ENST00000494893 SELENOTP62341 195 aa12.78□□□□□ -0.36
SNX17-209ENST00000494893 PRR20EP86478 221 aa12.78□□□□□ -0.36
SNX17-209ENST00000494893 PRR20CP86479 221 aa12.78□□□□□ -0.36
SNX17-209ENST00000494893 PRR20DP86480 221 aa12.78□□□□□ -0.36
SNX17-209ENST00000494893 PRR20BP86481 221 aa12.78□□□□□ -0.36
SNX17-209ENST00000494893 PRR20AP86496 221 aa12.78□□□□□ -0.36
SNX17-209ENST00000494893 ZNF90Q03938 601 aa12.78□□□□□ -0.36
SNX17-209ENST00000494893 USF2Q15853 346 aaPredicted RBP12.78□□□□□ -0.36
SNX17-209ENST00000494893 MIC13Q5XKP0 118 aa12.78□□□□□ -0.36
SNX17-209ENST00000494893 LINC00322Q6ZN03 302 aaPredicted RBP12.78□□□□□ -0.36
SNX17-209ENST00000494893 TMEM182Q6ZP80 229 aaPredicted RBP12.78□□□□□ -0.36
SNX17-209ENST00000494893 SPAG8Q99932 426 aaPredicted RBP12.78□□□□□ -0.36
SNX17-209ENST00000494893 UBQLN2Q9UHD9 624 aa12.78□□□□□ -0.36
SNX17-209ENST00000494893 PXMP4Q9Y6I8 212 aa12.78□□□□□ -0.36
SNX17-209ENST00000494893 SCGB2A1O75556 95 aa12.77□□□□□ -0.37
SNX17-209ENST00000494893 FABP1P07148 127 aa12.77□□□□□ -0.37
SNX17-209ENST00000494893 FFAR4Q5NUL3 377 aa12.77□□□□□ -0.37
SNX17-209ENST00000494893 STPG3Q8N7X2 389 aa12.77□□□□□ -0.37
SNX17-209ENST00000494893 Q8WTZ3 238 aa12.77□□□□□ -0.37
SNX17-209ENST00000494893 CITED4Q96RK1 184 aa12.77□□□□□ -0.37
SNX17-209ENST00000494893 SLC39A9Q9NUM3 307 aa12.77□□□□□ -0.37
SNX17-209ENST00000494893 OR11H12B2RN74 326 aa12.76□□□□□ -0.37
SNX17-209ENST00000494893 UMAD1C9J7I0 102 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms