RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 ECSCRQ19T08 205 aa8.3□□□□□ -1.08
PRPF4B-209ENST00000494674 SMUG1Q53HV7 270 aa8.3□□□□□ -1.08
PRPF4B-209ENST00000494674 UNQ5815/PRO19632Q6UWF5 114 aa8.3□□□□□ -1.08
PRPF4B-209ENST00000494674 ZNF600Q6ZNG1 722 aa8.3□□□□□ -1.08
PRPF4B-209ENST00000494674 RNF125Q96EQ8 232 aa8.3□□□□□ -1.08
PRPF4B-209ENST00000494674 SHANK2-AS3Q9BTD1 123 aa8.3□□□□□ -1.08
PRPF4B-209ENST00000494674 MRPS12O15235 138 aaKnown RBP8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 GNG7O60262 68 aa8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 CTSGP08311 255 aa8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 NBEAP1P0C6P0 100 aa8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 GATA3P23771 443 aa8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 ADMP35318 185 aa8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 SRP14P37108 136 aaKnown RBP8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 CRIP2P52943 208 aaPredicted RBP8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 USF2Q15853 346 aaPredicted RBP8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 VN1R17PQ8TDU5 208 aa8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 TCEAL7Q9BRU2 100 aa8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 TMUB1Q9BVT8 246 aa8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 SAV1Q9H4B6 383 aaPredicted RBP8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 BIN3Q9NQY0 253 aa8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 THYN1Q9P016 225 aa8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 FBXL7Q9UJT9 491 aa8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 DOPEY2Q9Y3R5 2298 aa8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 PRRC2AP48634 2157 aaKnown RBP8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 MDFIC2A0A1B0GVS7 189 aa8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 A6NDX4 124 aa8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 C5orf52A6NGY3 159 aa8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 PEX7O00628 323 aa8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 PPP1R2P9O14990 202 aa8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 IGHV3-23P01764 117 aa8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 IL4P05112 153 aa8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 HIST1H1BP16401 226 aaKnown RBP8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 GNG4P50150 75 aa8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 RANP62826 216 aaKnown RBP8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 LINC01356Q8N9X3 169 aa8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 ZNF502Q8TBZ5 544 aa8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 BLNKQ8WV28 456 aa8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 LINC00479Q96M42 142 aa8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 OR5B12Q96R08 314 aa8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 CHRDL1Q9BU40 450 aa8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 ZNF586Q9NXT0 402 aa8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 CDC42EP3Q9UKI2 254 aa8.29□□□□□ -1.08
PRPF4B-209ENST00000494674 TEX15Q9BXT5 2789 aa8.28□□□□□ -1.08
PRPF4B-209ENST00000494674 CREBBPQ92793 2442 aa8.28□□□□□ -1.08
PRPF4B-209ENST00000494674 OR2T8A6NH00 312 aa8.28□□□□□ -1.08
PRPF4B-209ENST00000494674 H3BTX0 84 aa8.28□□□□□ -1.08
PRPF4B-209ENST00000494674 TRGC2P03986 189 aa8.28□□□□□ -1.08
PRPF4B-209ENST00000494674 IGLC2P0DOY2 106 aa8.28□□□□□ -1.08
PRPF4B-209ENST00000494674 GNG5P63218 68 aa8.28□□□□□ -1.08
PRPF4B-209ENST00000494674 RHOGP84095 191 aa8.28□□□□□ -1.08
PRPF4B-209ENST00000494674 Q56UQ5 140 aa8.28□□□□□ -1.08
PRPF4B-209ENST00000494674 OR10G8Q8NGN5 311 aa8.28□□□□□ -1.08
PRPF4B-209ENST00000494674 TMEM68Q96MH6 324 aa8.28□□□□□ -1.08
PRPF4B-209ENST00000494674 IMMP2LQ96T52 175 aa8.28□□□□□ -1.08
PRPF4B-209ENST00000494674 TXN2Q99757 166 aa8.28□□□□□ -1.08
PRPF4B-209ENST00000494674 HELZ2Q9BYK8 2649 aaKnown RBP8.28□□□□□ -1.08
PRPF4B-209ENST00000494674 NBPF19A0A087WUL8 3843 aa8.27□□□□□ -1.09
PRPF4B-209ENST00000494674 H3BUX3 64 aa8.27□□□□□ -1.09
PRPF4B-209ENST00000494674 GCGP01275 180 aa8.27□□□□□ -1.09
PRPF4B-209ENST00000494674 TYMSP04818 313 aa8.27□□□□□ -1.09
PRPF4B-209ENST00000494674 HIST1H1EP10412 219 aaKnown RBP8.27□□□□□ -1.09
PRPF4B-209ENST00000494674 TAS2R60P59551 318 aa8.27□□□□□ -1.09
PRPF4B-209ENST00000494674 SNRPEP62304 92 aaKnown RBP8.27□□□□□ -1.09
PRPF4B-209ENST00000494674 LOXL1Q08397 574 aaPredicted RBP8.27□□□□□ -1.09
PRPF4B-209ENST00000494674 FOXL1Q12952 345 aa8.27□□□□□ -1.09
PRPF4B-209ENST00000494674 OR5I1Q13606 314 aa8.27□□□□□ -1.09
PRPF4B-209ENST00000494674 C15orf32Q32M92 178 aa8.27□□□□□ -1.09
PRPF4B-209ENST00000494674 CCDC140Q96MF4 163 aa8.27□□□□□ -1.09
PRPF4B-209ENST00000494674 SRD5A3Q9H8P0 318 aa8.27□□□□□ -1.09
PRPF4B-209ENST00000494674 BEX4Q9NWD9 120 aaPredicted RBP8.27□□□□□ -1.09
PRPF4B-209ENST00000494674 EPDR1Q9UM22 224 aa8.27□□□□□ -1.09
PRPF4B-209ENST00000494674 KLF12Q9Y4X4 402 aa8.27□□□□□ -1.09
PRPF4B-209ENST00000494674 ITPR3Q14573 2671 aa8.26□□□□□ -1.09
PRPF4B-209ENST00000494674 A0A1W2PPQ1 181 aa8.26□□□□□ -1.09
PRPF4B-209ENST00000494674 PGPA6NDG6 321 aa8.26□□□□□ -1.09
PRPF4B-209ENST00000494674 UBE2CO00762 179 aa8.26□□□□□ -1.09
PRPF4B-209ENST00000494674 ISLRO14498 428 aa8.26□□□□□ -1.09
PRPF4B-209ENST00000494674 HIST1H2BKO60814 126 aa8.26□□□□□ -1.09
PRPF4B-209ENST00000494674 HIST1H2BJP06899 126 aa8.26□□□□□ -1.09
PRPF4B-209ENST00000494674 HIST1H2BOP23527 126 aa8.26□□□□□ -1.09
PRPF4B-209ENST00000494674 S100PP25815 95 aa8.26□□□□□ -1.09
PRPF4B-209ENST00000494674 HIST1H2BBP33778 126 aa8.26□□□□□ -1.09
PRPF4B-209ENST00000494674 FAM3BP58499 235 aaPredicted RBP8.26□□□□□ -1.09
PRPF4B-209ENST00000494674 HIST1H2BDP58876 126 aa8.26□□□□□ -1.09
PRPF4B-209ENST00000494674 HIST1H2BCP62807 126 aa8.26□□□□□ -1.09
PRPF4B-209ENST00000494674 HIST2H2BEQ16778 126 aa8.26□□□□□ -1.09
PRPF4B-209ENST00000494674 DEFB113Q30KQ7 82 aa8.26□□□□□ -1.09
PRPF4B-209ENST00000494674 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.26□□□□□ -1.09
PRPF4B-209ENST00000494674 KRTAP1-3Q8IUG1 177 aa8.26□□□□□ -1.09
PRPF4B-209ENST00000494674 C5orf17Q8NAS9 161 aa8.26□□□□□ -1.09
PRPF4B-209ENST00000494674 MAPK1IP1LQ8NDC0 245 aa8.26□□□□□ -1.09
PRPF4B-209ENST00000494674 FRZBQ92765 325 aa8.26□□□□□ -1.09
PRPF4B-209ENST00000494674 HIST1H2BHQ93079 126 aa8.26□□□□□ -1.09
PRPF4B-209ENST00000494674 HIST1H2BNQ99877 126 aa8.26□□□□□ -1.09
PRPF4B-209ENST00000494674 HIST1H2BMQ99879 126 aa8.26□□□□□ -1.09
PRPF4B-209ENST00000494674 Q9H3A6 140 aa8.26□□□□□ -1.09
PRPF4B-209ENST00000494674 V9GYV3 84 aa8.26□□□□□ -1.09
PRPF4B-209ENST00000494674 TRAV41A0A0B4J266 112 aa8.26□□□□□ -1.09
PRPF4B-209ENST00000494674 TRAV34A0A0B4J273 112 aa8.26□□□□□ -1.09
PRPF4B-209ENST00000494674 ZNF98A6NK75 572 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms