RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 SPANXN5Q5MJ07 72 aa6.96□□□□□ -1.3
MSH5-218ENST00000494646 GDF5OSQ5U4N7 250 aa6.96□□□□□ -1.3
MSH5-218ENST00000494646 GGNBP1Q5YKI7 109 aa6.96□□□□□ -1.3
MSH5-218ENST00000494646 CENPSQ8N2Z9 138 aa6.96□□□□□ -1.3
MSH5-218ENST00000494646 RPP25LQ8N5L8 163 aaKnown RBP6.96□□□□□ -1.3
MSH5-218ENST00000494646 Q8NAQ8 132 aa6.96□□□□□ -1.3
MSH5-218ENST00000494646 CSNK1G2-AS1Q8NCQ2 148 aa6.96□□□□□ -1.3
MSH5-218ENST00000494646 PPP1R14BQ96C90 147 aa6.96□□□□□ -1.3
MSH5-218ENST00000494646 MFFQ9GZY8 342 aa6.96□□□□□ -1.3
MSH5-218ENST00000494646 C11orf68Q9H3H3 251 aaKnown RBP6.96□□□□□ -1.3
MSH5-218ENST00000494646 XCL2Q9UBD3 114 aa6.96□□□□□ -1.3
MSH5-218ENST00000494646 FLVCR2Q9UPI3 526 aa6.96□□□□□ -1.3
MSH5-218ENST00000494646 TMED3Q9Y3Q3 217 aa6.96□□□□□ -1.3
MSH5-218ENST00000494646 X6R8D5 127 aa6.96□□□□□ -1.3
MSH5-218ENST00000494646 IGKV1OR2-108A0A075B7D4 117 aa6.95□□□□□ -1.3
MSH5-218ENST00000494646 ELOA3CA0A087WX78 387 aaPredicted RBP6.95□□□□□ -1.3
MSH5-218ENST00000494646 PIGBOS1A0A0B4J2F0 54 aa6.95□□□□□ -1.3
MSH5-218ENST00000494646 ZNF705EA8MWA4 302 aaPredicted RBP6.95□□□□□ -1.3
MSH5-218ENST00000494646 IGLL5B9A064 214 aa6.95□□□□□ -1.3
MSH5-218ENST00000494646 H3BMM0 161 aa6.95□□□□□ -1.3
MSH5-218ENST00000494646 H3BP45 60 aa6.95□□□□□ -1.3
MSH5-218ENST00000494646 SYNGR2O43760 224 aa6.95□□□□□ -1.3
MSH5-218ENST00000494646 ADAP1O75689 374 aa6.95□□□□□ -1.3
MSH5-218ENST00000494646 TMEM41BQ5BJD5 291 aa6.95□□□□□ -1.3
MSH5-218ENST00000494646 SPANXN2Q5MJ10 180 aa6.95□□□□□ -1.3
MSH5-218ENST00000494646 TMEM182Q6ZP80 229 aaPredicted RBP6.95□□□□□ -1.3
MSH5-218ENST00000494646 ZNF767PQ75MW2 155 aa6.95□□□□□ -1.3
MSH5-218ENST00000494646 C2CD4CQ8TF44 421 aa6.95□□□□□ -1.3
MSH5-218ENST00000494646 SRRQ9GZT4 340 aa6.95□□□□□ -1.3
MSH5-218ENST00000494646 RBM38Q9H0Z9 239 aaKnown RBP6.95□□□□□ -1.3
MSH5-218ENST00000494646 TBC1D24Q9ULP9 559 aa6.95□□□□□ -1.3
MSH5-218ENST00000494646 C9orf170A2RU37 121 aa6.94□□□□□ -1.3
MSH5-218ENST00000494646 SLC25A6P12236 298 aa6.94□□□□□ -1.3
MSH5-218ENST00000494646 MIFP14174 115 aa6.94□□□□□ -1.3
MSH5-218ENST00000494646 HLA-DMBP28068 263 aa6.94□□□□□ -1.3
MSH5-218ENST00000494646 SMCPP49901 116 aaPredicted RBP6.94□□□□□ -1.3
MSH5-218ENST00000494646 POLR2GP62487 172 aaKnown RBP eCLIP6.94□□□□□ -1.3
MSH5-218ENST00000494646 RPP30P78346 268 aaKnown RBP6.94□□□□□ -1.3
MSH5-218ENST00000494646 TRIQKQ629K1 86 aa6.94□□□□□ -1.3
MSH5-218ENST00000494646 LGALS9CQ6DKI2 356 aa6.94□□□□□ -1.3
MSH5-218ENST00000494646 OR8I2Q8N0Y5 310 aa6.94□□□□□ -1.3
MSH5-218ENST00000494646 THAP8Q8NA92 274 aa6.94□□□□□ -1.3
MSH5-218ENST00000494646 TRGV9Q99603 122 aa6.94□□□□□ -1.3
MSH5-218ENST00000494646 SEPSECSQ9HD40 501 aaKnown RBP6.94□□□□□ -1.3
MSH5-218ENST00000494646 DYNC1H1Q14204 4646 aaKnown RBP6.93□□□□□ -1.3
MSH5-218ENST00000494646 IGHV3OR16-12A0A075B7B8 117 aa6.93□□□□□ -1.3
MSH5-218ENST00000494646 FABP1P07148 127 aa6.93□□□□□ -1.3
MSH5-218ENST00000494646 OR4E1P0C645 316 aa6.93□□□□□ -1.3
MSH5-218ENST00000494646 ORM2P19652 201 aa6.93□□□□□ -1.3
MSH5-218ENST00000494646 ID1P41134 155 aa6.93□□□□□ -1.3
MSH5-218ENST00000494646 NKX2-1P43699 371 aaPredicted RBP6.93□□□□□ -1.3
MSH5-218ENST00000494646 NUTF2P61970 127 aaKnown RBP6.93□□□□□ -1.3
MSH5-218ENST00000494646 OR8G2PQ6IF36 304 aa6.93□□□□□ -1.3
MSH5-218ENST00000494646 Q6ZTC4 211 aa6.93□□□□□ -1.3
MSH5-218ENST00000494646 OR4B1Q8NGF8 309 aa6.93□□□□□ -1.3
MSH5-218ENST00000494646 CIB3Q96Q77 187 aaPredicted RBP6.93□□□□□ -1.3
MSH5-218ENST00000494646 SDHCQ99643 169 aaPredicted RBP6.93□□□□□ -1.3
MSH5-218ENST00000494646 RSG1Q9BU20 258 aa6.93□□□□□ -1.3
MSH5-218ENST00000494646 SLC25A22Q9H936 323 aa6.93□□□□□ -1.3
MSH5-218ENST00000494646 PSENENQ9NZ42 101 aa6.93□□□□□ -1.3
MSH5-218ENST00000494646 APLNQ9ULZ1 77 aa6.93□□□□□ -1.3
MSH5-218ENST00000494646 CELA1Q9UNI1 258 aa6.93□□□□□ -1.3
MSH5-218ENST00000494646 STRAPQ9Y3F4 350 aaKnown RBP6.93□□□□□ -1.3
MSH5-218ENST00000494646 PKD1P98161 4303 aa6.93□□□□□ -1.3
MSH5-218ENST00000494646 SMCO3A2RU48 225 aa6.92□□□□□ -1.3
MSH5-218ENST00000494646 NAP1L6A6NFF2 107 aa6.92□□□□□ -1.3
MSH5-218ENST00000494646 PGPEP1LA6NFU8 196 aa6.92□□□□□ -1.3
MSH5-218ENST00000494646 PRSS46E5RG02 174 aa6.92□□□□□ -1.3
MSH5-218ENST00000494646 F6UB75 175 aa6.92□□□□□ -1.3
MSH5-218ENST00000494646 NDUFB6O95139 128 aa6.92□□□□□ -1.3
MSH5-218ENST00000494646 HLA-DRB4P13762 266 aa6.92□□□□□ -1.3
MSH5-218ENST00000494646 ANXA7P20073 488 aaKnown RBP6.92□□□□□ -1.3
MSH5-218ENST00000494646 TOR2AQ5JU69 321 aa6.92□□□□□ -1.3
MSH5-218ENST00000494646 C1orf194Q5T5A4 169 aa6.92□□□□□ -1.3
MSH5-218ENST00000494646 ARL6IP6Q8N6S5 226 aa6.92□□□□□ -1.3
MSH5-218ENST00000494646 OR1B1Q8NGR6 318 aa6.92□□□□□ -1.3
MSH5-218ENST00000494646 COQ8AQ8NI60 647 aa6.92□□□□□ -1.3
MSH5-218ENST00000494646 RNF141Q8WVD5 230 aa6.92□□□□□ -1.3
MSH5-218ENST00000494646 DEDD2Q8WXF8 326 aa6.92□□□□□ -1.3
MSH5-218ENST00000494646 C1QTNF4Q9BXJ3 329 aa6.92□□□□□ -1.3
MSH5-218ENST00000494646 SAV1Q9H4B6 383 aaPredicted RBP6.92□□□□□ -1.3
MSH5-218ENST00000494646 HLA-DRB4X5D2U9 266 aa6.92□□□□□ -1.3
MSH5-218ENST00000494646 TRAV10A0A0B4J240 114 aa6.91□□□□□ -1.3
MSH5-218ENST00000494646 ZNF98A6NK75 572 aa6.91□□□□□ -1.3
MSH5-218ENST00000494646 CENPXA8MT69 81 aa6.91□□□□□ -1.3
MSH5-218ENST00000494646 C11orf94C9JXX5 98 aa6.91□□□□□ -1.3
MSH5-218ENST00000494646 ZNF701M0R085 212 aaPredicted RBP6.91□□□□□ -1.3
MSH5-218ENST00000494646 SOCS3O14543 225 aa6.91□□□□□ -1.3
MSH5-218ENST00000494646 SSSCA1O60232 199 aa6.91□□□□□ -1.3
MSH5-218ENST00000494646 CCNKO75909 580 aa6.91□□□□□ -1.3
MSH5-218ENST00000494646 IFNA21P01568 189 aa6.91□□□□□ -1.3
MSH5-218ENST00000494646 NUP62P37198 522 aaPredicted RBP6.91□□□□□ -1.3
MSH5-218ENST00000494646 EMP1P54849 157 aa6.91□□□□□ -1.3
MSH5-218ENST00000494646 UBE2MP61081 183 aaKnown RBP6.91□□□□□ -1.3
MSH5-218ENST00000494646 RRAS2P62070 204 aaPredicted RBP6.91□□□□□ -1.3
MSH5-218ENST00000494646 AKR1C1Q04828 323 aa6.91□□□□□ -1.3
MSH5-218ENST00000494646 FGL1Q08830 312 aa6.91□□□□□ -1.3
MSH5-218ENST00000494646 C12orf74Q32Q52 190 aa6.91□□□□□ -1.3
MSH5-218ENST00000494646 IGFL4Q6B9Z1 124 aa6.91□□□□□ -1.3
MSH5-218ENST00000494646 EBLN2Q6P2I7 272 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms