RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 FOLR2P14207 255 aa9.97□□□□□ -0.81
ERCC3-209ENST00000494464 GPR183P32249 361 aa9.97□□□□□ -0.81
ERCC3-209ENST00000494464 ERHP84090 104 aaKnown RBP9.97□□□□□ -0.81
ERCC3-209ENST00000494464 CD300EQ496F6 205 aaPredicted RBP9.97□□□□□ -0.81
ERCC3-209ENST00000494464 FAM106AQ4KMX7 169 aa9.97□□□□□ -0.81
ERCC3-209ENST00000494464 C10orf91Q5T1B1 145 aa9.97□□□□□ -0.81
ERCC3-209ENST00000494464 ZNF709Q8N972 641 aa9.97□□□□□ -0.81
ERCC3-209ENST00000494464 OR1L6Q8NGR2 347 aa9.97□□□□□ -0.81
ERCC3-209ENST00000494464 DYNLRB2Q8TF09 96 aa9.97□□□□□ -0.81
ERCC3-209ENST00000494464 MBD3L1Q8WWY6 194 aa9.97□□□□□ -0.81
ERCC3-209ENST00000494464 NARS2Q96I59 477 aaKnown RBP9.97□□□□□ -0.81
ERCC3-209ENST00000494464 SCRT1Q9BWW7 348 aa9.97□□□□□ -0.81
ERCC3-209ENST00000494464 HINT2Q9BX68 163 aa9.97□□□□□ -0.81
ERCC3-209ENST00000494464 TREM1Q9NP99 234 aa9.97□□□□□ -0.81
ERCC3-209ENST00000494464 RPRMQ9NS64 109 aa9.97□□□□□ -0.81
ERCC3-209ENST00000494464 TECRQ9NZ01 308 aaKnown RBP9.97□□□□□ -0.81
ERCC3-209ENST00000494464 CARHSP1Q9Y2V2 147 aaKnown RBP9.97□□□□□ -0.81
ERCC3-209ENST00000494464 TGOLN2O43493 480 aa9.96□□□□□ -0.82
ERCC3-209ENST00000494464 CLEC3BP05452 202 aa9.96□□□□□ -0.82
ERCC3-209ENST00000494464 MFAP2P55001 183 aa9.96□□□□□ -0.82
ERCC3-209ENST00000494464 SRSF3P84103 164 aaKnown RBP9.96□□□□□ -0.82
ERCC3-209ENST00000494464 PEA15Q15121 130 aa9.96□□□□□ -0.82
ERCC3-209ENST00000494464 GUK1Q16774 197 aa9.96□□□□□ -0.82
ERCC3-209ENST00000494464 DEFB114Q30KQ6 69 aa9.96□□□□□ -0.82
ERCC3-209ENST00000494464 ZNF114Q8NC26 417 aa9.96□□□□□ -0.82
ERCC3-209ENST00000494464 NPVFQ9HCQ7 196 aa9.96□□□□□ -0.82
ERCC3-209ENST00000494464 AGPAT2O15120 278 aa9.95□□□□□ -0.82
ERCC3-209ENST00000494464 ADCYAP1P18509 176 aa9.95□□□□□ -0.82
ERCC3-209ENST00000494464 EDN2P20800 178 aa9.95□□□□□ -0.82
ERCC3-209ENST00000494464 CBLN1P23435 193 aa9.95□□□□□ -0.82
ERCC3-209ENST00000494464 OPRK1P41145 380 aa9.95□□□□□ -0.82
ERCC3-209ENST00000494464 ELLP55199 621 aaPredicted RBP9.95□□□□□ -0.82
ERCC3-209ENST00000494464 OR1P1Q8NH06 330 aa9.95□□□□□ -0.82
ERCC3-209ENST00000494464 RNASEH2CQ8TDP1 164 aaKnown RBP9.95□□□□□ -0.82
ERCC3-209ENST00000494464 RCHY1Q96PM5 261 aa9.95□□□□□ -0.82
ERCC3-209ENST00000494464 TM2D3Q9BRN9 247 aa9.95□□□□□ -0.82
ERCC3-209ENST00000494464 SEC11CQ9BY50 192 aa9.95□□□□□ -0.82
ERCC3-209ENST00000494464 SMCO3A2RU48 225 aa9.94□□□□□ -0.82
ERCC3-209ENST00000494464 K7EIM0 57 aa9.94□□□□□ -0.82
ERCC3-209ENST00000494464 SUB1P53999 127 aaKnown RBP eCLIP9.94□□□□□ -0.82
ERCC3-209ENST00000494464 AKR1C1Q04828 323 aa9.94□□□□□ -0.82
ERCC3-209ENST00000494464 PMS2P11Q13670 270 aa9.94□□□□□ -0.82
ERCC3-209ENST00000494464 ZNF726P1Q15940 193 aa9.94□□□□□ -0.82
ERCC3-209ENST00000494464 ACOT6Q3I5F7 207 aaPredicted RBP9.94□□□□□ -0.82
ERCC3-209ENST00000494464 FFAR4Q5NUL3 377 aa9.94□□□□□ -0.82
ERCC3-209ENST00000494464 PVRIGQ6DKI7 326 aa9.94□□□□□ -0.82
ERCC3-209ENST00000494464 UNQ9165/PRO28630Q6UXU0 137 aa9.94□□□□□ -0.82
ERCC3-209ENST00000494464 SFT2D1Q8WV19 159 aa9.94□□□□□ -0.82
ERCC3-209ENST00000494464 CACNG8Q8WXS5 425 aa9.94□□□□□ -0.82
ERCC3-209ENST00000494464 TMEM190Q8WZ59 177 aa9.94□□□□□ -0.82
ERCC3-209ENST00000494464 MGST2Q99735 147 aa9.94□□□□□ -0.82
ERCC3-209ENST00000494464 GGTLC1Q9BX51 225 aa9.94□□□□□ -0.82
ERCC3-209ENST00000494464 TMEM231Q9H6L2 316 aa9.94□□□□□ -0.82
ERCC3-209ENST00000494464 VSIRQ9H7M9 311 aa9.94□□□□□ -0.82
ERCC3-209ENST00000494464 ZMAT4Q9H898 229 aa9.94□□□□□ -0.82
ERCC3-209ENST00000494464 C21orf62Q9NYP8 219 aa9.94□□□□□ -0.82
ERCC3-209ENST00000494464 STAB2Q8WWQ8 2551 aa9.94□□□□□ -0.82
ERCC3-209ENST00000494464 CTXND1A0A1B0GTU2 59 aa9.93□□□□□ -0.82
ERCC3-209ENST00000494464 ZNF320A2RRD8 509 aa9.93□□□□□ -0.82
ERCC3-209ENST00000494464 ZNF785A8K8V0 405 aa9.93□□□□□ -0.82
ERCC3-209ENST00000494464 F8W036 122 aa9.93□□□□□ -0.82
ERCC3-209ENST00000494464 F8W735 103 aaPredicted RBP9.93□□□□□ -0.82
ERCC3-209ENST00000494464 SFTA3P0C7M3 94 aa9.93□□□□□ -0.82
ERCC3-209ENST00000494464 C8orf88P0DMB2 117 aa9.93□□□□□ -0.82
ERCC3-209ENST00000494464 M6PRP20645 277 aa9.93□□□□□ -0.82
ERCC3-209ENST00000494464 GPX4P36969 197 aaPredicted RBP9.93□□□□□ -0.82
ERCC3-209ENST00000494464 CD81P60033 236 aa9.93□□□□□ -0.82
ERCC3-209ENST00000494464 TEPPQ6URK8 271 aa9.93□□□□□ -0.82
ERCC3-209ENST00000494464 SVBPQ8N300 66 aa9.93□□□□□ -0.82
ERCC3-209ENST00000494464 RPP25LQ8N5L8 163 aaKnown RBP9.93□□□□□ -0.82
ERCC3-209ENST00000494464 MLXQ9UH92 298 aa9.93□□□□□ -0.82
ERCC3-209ENST00000494464 UFC1Q9Y3C8 167 aa9.93□□□□□ -0.82
ERCC3-209ENST00000494464 TENM3Q9P273 2699 aa9.92□□□□□ -0.82
ERCC3-209ENST00000494464 MAP1LC3B2A6NCE7 125 aa9.92□□□□□ -0.82
ERCC3-209ENST00000494464 OR2T8A6NH00 312 aa9.92□□□□□ -0.82
ERCC3-209ENST00000494464 APOC3P02656 99 aa9.92□□□□□ -0.82
ERCC3-209ENST00000494464 FCGR2BP31994 310 aaPredicted RBP9.92□□□□□ -0.82
ERCC3-209ENST00000494464 RAB31Q13636 194 aa9.92□□□□□ -0.82
ERCC3-209ENST00000494464 ZNF506Q5JVG8 444 aa9.92□□□□□ -0.82
ERCC3-209ENST00000494464 TMEM144Q7Z5S9 345 aa9.92□□□□□ -0.82
ERCC3-209ENST00000494464 TMEM61Q8N0U2 210 aa9.92□□□□□ -0.82
ERCC3-209ENST00000494464 OR10G4Q8NGN3 311 aa9.92□□□□□ -0.82
ERCC3-209ENST00000494464 OR10G9Q8NGN4 311 aa9.92□□□□□ -0.82
ERCC3-209ENST00000494464 OR10G7Q8NGN6 311 aa9.92□□□□□ -0.82
ERCC3-209ENST00000494464 ACTR3CQ9C0K3 210 aaPredicted RBP9.92□□□□□ -0.82
ERCC3-209ENST00000494464 MAP1LC3BQ9GZQ8 125 aa9.92□□□□□ -0.82
ERCC3-209ENST00000494464 EIF5A2Q9GZV4 153 aaKnown RBP9.92□□□□□ -0.82
ERCC3-209ENST00000494464 GAR1Q9NY12 217 aaKnown RBP9.92□□□□□ -0.82
ERCC3-209ENST00000494464 MRPL27Q9P0M9 148 aaKnown RBP9.92□□□□□ -0.82
ERCC3-209ENST00000494464 KMT2CQ8NEZ4 4911 aaKnown RBP9.92□□□□□ -0.82
ERCC3-209ENST00000494464 RBFOX3A6NFN3 312 aa9.91□□□□□ -0.82
ERCC3-209ENST00000494464 C9JQL5 133 aa9.91□□□□□ -0.82
ERCC3-209ENST00000494464 I3L2K1 104 aa9.91□□□□□ -0.82
ERCC3-209ENST00000494464 NDUFA4O00483 81 aa9.91□□□□□ -0.82
ERCC3-209ENST00000494464 ADMP35318 185 aa9.91□□□□□ -0.82
ERCC3-209ENST00000494464 RPL29P47914 159 aaKnown RBP9.91□□□□□ -0.82
ERCC3-209ENST00000494464 CCL20P78556 96 aa9.91□□□□□ -0.82
ERCC3-209ENST00000494464 TM4SF20Q53R12 229 aa9.91□□□□□ -0.82
ERCC3-209ENST00000494464 SSX7Q7RTT5 188 aa9.91□□□□□ -0.82
ERCC3-209ENST00000494464 SLC16A13Q7RTY0 426 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms