RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 ANKRD31Q8N7Z5 1873 aa4.42□□□□□ -1.7
SNX13-210ENST00000494402 OR4B1Q8NGF8 309 aa4.42□□□□□ -1.7
SNX13-210ENST00000494402 PFN4Q8NHR9 129 aa4.42□□□□□ -1.7
SNX13-210ENST00000494402 SPANXDQ9BXN6 97 aa4.42□□□□□ -1.7
SNX13-210ENST00000494402 C16orf95Q9H693 158 aa4.42□□□□□ -1.7
SNX13-210ENST00000494402 MPC1Q9Y5U8 109 aa4.42□□□□□ -1.7
SNX13-210ENST00000494402 BRWD3Q6RI45 1802 aa4.42□□□□□ -1.7
SNX13-210ENST00000494402 PIK3C2AO00443 1686 aa4.41□□□□□ -1.7
SNX13-210ENST00000494402 PCSK5Q92824 1860 aa4.41□□□□□ -1.7
SNX13-210ENST00000494402 KDM5CP41229 1560 aa4.41□□□□□ -1.7
SNX13-210ENST00000494402 TTC37Q6PGP7 1564 aa4.41□□□□□ -1.7
SNX13-210ENST00000494402 MYH7P12883 1935 aa4.41□□□□□ -1.7
SNX13-210ENST00000494402 A0A087WYN8 130 aa4.41□□□□□ -1.7
SNX13-210ENST00000494402 A0A1B0GVG6 124 aa4.41□□□□□ -1.7
SNX13-210ENST00000494402 SPAARA0A1B0GVQ0 90 aa4.41□□□□□ -1.7
SNX13-210ENST00000494402 C7orf71A4D174 169 aa4.41□□□□□ -1.7
SNX13-210ENST00000494402 SLC25A5P05141 298 aaKnown RBP4.41□□□□□ -1.7
SNX13-210ENST00000494402 HIST1H1DP16402 221 aaKnown RBP4.41□□□□□ -1.7
SNX13-210ENST00000494402 NFYAP23511 347 aaPredicted RBP4.41□□□□□ -1.7
SNX13-210ENST00000494402 EIF2B2P49770 351 aaKnown RBP4.41□□□□□ -1.7
SNX13-210ENST00000494402 TEN1Q86WV5 123 aa4.41□□□□□ -1.7
SNX13-210ENST00000494402 OR10P1Q8NGE3 313 aa4.41□□□□□ -1.7
SNX13-210ENST00000494402 COMMD3Q9UBI1 195 aa4.41□□□□□ -1.7
SNX13-210ENST00000494402 NUP205Q92621 2012 aa4.41□□□□□ -1.7
SNX13-210ENST00000494402 IGKV1D-37A0A075B6S9 117 aa4.4□□□□□ -1.71
SNX13-210ENST00000494402 IGHV3-15A0A0B4J1V0 119 aa4.4□□□□□ -1.71
SNX13-210ENST00000494402 A0A1W2PQD3 144 aa4.4□□□□□ -1.71
SNX13-210ENST00000494402 H3BQ85 93 aa4.4□□□□□ -1.71
SNX13-210ENST00000494402 PHOX2AO14813 284 aa4.4□□□□□ -1.71
SNX13-210ENST00000494402 FOXA1P55317 472 aa4.4□□□□□ -1.71
SNX13-210ENST00000494402 FUT5Q11128 374 aa4.4□□□□□ -1.71
SNX13-210ENST00000494402 C14orf177Q52M58 125 aa4.4□□□□□ -1.71
SNX13-210ENST00000494402 KHDC3LQ587J8 217 aa4.4□□□□□ -1.71
SNX13-210ENST00000494402 NCMAPQ5T1S8 102 aa4.4□□□□□ -1.71
SNX13-210ENST00000494402 DPPA3Q6W0C5 159 aa4.4□□□□□ -1.71
SNX13-210ENST00000494402 SOSTDC1Q6X4U4 206 aa4.4□□□□□ -1.71
SNX13-210ENST00000494402 TMEM91Q6ZNR0 172 aa4.4□□□□□ -1.71
SNX13-210ENST00000494402 C2orf91Q6ZV80 131 aa4.4□□□□□ -1.71
SNX13-210ENST00000494402 SNX29P2Q8IUI4 249 aa4.4□□□□□ -1.71
SNX13-210ENST00000494402 WFDC11Q8NEX6 87 aa4.4□□□□□ -1.71
SNX13-210ENST00000494402 VOPP1Q96AW1 172 aa4.4□□□□□ -1.71
SNX13-210ENST00000494402 ELSPBP1Q96BH3 223 aa4.4□□□□□ -1.71
SNX13-210ENST00000494402 CIB3Q96Q77 187 aaPredicted RBP4.4□□□□□ -1.71
SNX13-210ENST00000494402 IMMP2LQ96T52 175 aa4.4□□□□□ -1.71
SNX13-210ENST00000494402 MRPL57Q9BQC6 102 aaKnown RBP4.4□□□□□ -1.71
SNX13-210ENST00000494402 SNRNP25Q9BV90 132 aaKnown RBP4.4□□□□□ -1.71
SNX13-210ENST00000494402 DUSP21Q9H596 190 aa4.4□□□□□ -1.71
SNX13-210ENST00000494402 FAIMQ9NVQ4 179 aa4.4□□□□□ -1.71
SNX13-210ENST00000494402 DOCK8Q8NF50 2099 aa4.39□□□□□ -1.71
SNX13-210ENST00000494402 MYH7BA7E2Y1 1941 aa4.39□□□□□ -1.71
SNX13-210ENST00000494402 A0A0D9SG52 128 aa4.39□□□□□ -1.71
SNX13-210ENST00000494402 MDFIC2A0A1B0GVS7 189 aa4.39□□□□□ -1.71
SNX13-210ENST00000494402 H3BT86 120 aa4.39□□□□□ -1.71
SNX13-210ENST00000494402 IGHV3-53P01767 116 aa4.39□□□□□ -1.71
SNX13-210ENST00000494402 HBDP02042 147 aa4.39□□□□□ -1.71
SNX13-210ENST00000494402 TPPP2P59282 170 aa4.39□□□□□ -1.71
SNX13-210ENST00000494402 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.39□□□□□ -1.71
SNX13-210ENST00000494402 ZNF660Q6AZW8 331 aaPredicted RBP4.39□□□□□ -1.71
SNX13-210ENST00000494402 ATOH7Q8N100 152 aa4.39□□□□□ -1.71
SNX13-210ENST00000494402 LINC00311Q8N616 119 aa4.39□□□□□ -1.71
SNX13-210ENST00000494402 C3orf56Q8N813 242 aa4.39□□□□□ -1.71
SNX13-210ENST00000494402 SFT2D1Q8WV19 159 aa4.39□□□□□ -1.71
SNX13-210ENST00000494402 DIRC1Q969H9 104 aa4.39□□□□□ -1.71
SNX13-210ENST00000494402 FANCMQ8IYD8 2048 aa4.39□□□□□ -1.71
SNX13-210ENST00000494402 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.38□□□□□ -1.71
SNX13-210ENST00000494402 ZNF861PO60384 105 aa4.38□□□□□ -1.71
SNX13-210ENST00000494402 TRGC1P0CF51 173 aa4.38□□□□□ -1.71
SNX13-210ENST00000494402 PYYP10082 97 aa4.38□□□□□ -1.71
SNX13-210ENST00000494402 HIST1H1BP16401 226 aaKnown RBP4.38□□□□□ -1.71
SNX13-210ENST00000494402 ZNF117Q03924 483 aa4.38□□□□□ -1.71
SNX13-210ENST00000494402 DYNAPQ8N1N2 210 aa4.38□□□□□ -1.71
SNX13-210ENST00000494402 DPH3Q96FX2 82 aa4.38□□□□□ -1.71
SNX13-210ENST00000494402 ASF1BQ9NVP2 202 aa4.38□□□□□ -1.71
SNX13-210ENST00000494402 IER3IP1Q9Y5U9 82 aa4.38□□□□□ -1.71
SNX13-210ENST00000494402 COL18A1P39060 1754 aa4.37□□□□□ -1.71
SNX13-210ENST00000494402 RAPGEF2Q9Y4G8 1499 aa4.37□□□□□ -1.71
SNX13-210ENST00000494402 OBSL1O75147 1896 aa4.37□□□□□ -1.71
SNX13-210ENST00000494402 ZNF638Q14966 1978 aaKnown RBP4.37□□□□□ -1.71
SNX13-210ENST00000494402 IGKV3D-15A0A087WSY6 115 aa4.37□□□□□ -1.71
SNX13-210ENST00000494402 FNDC10F2Z333 226 aa4.37□□□□□ -1.71
SNX13-210ENST00000494402 SDCBPO00560 298 aaPredicted RBP4.37□□□□□ -1.71
SNX13-210ENST00000494402 IL4P05112 153 aa4.37□□□□□ -1.71
SNX13-210ENST00000494402 CISD3P0C7P0 127 aa4.37□□□□□ -1.71
SNX13-210ENST00000494402 ZNF883P0CG24 379 aa4.37□□□□□ -1.71
SNX13-210ENST00000494402 GZMBP10144 247 aa4.37□□□□□ -1.71
SNX13-210ENST00000494402 RPL28P46779 137 aaKnown RBP4.37□□□□□ -1.71
SNX13-210ENST00000494402 TMEM258P61165 79 aa4.37□□□□□ -1.71
SNX13-210ENST00000494402 DYNLT1P63172 113 aa4.37□□□□□ -1.71
SNX13-210ENST00000494402 SUPT4H1P63272 117 aaKnown RBP4.37□□□□□ -1.71
SNX13-210ENST00000494402 ZNF816Q0VGE8 651 aaPredicted RBP4.37□□□□□ -1.71
SNX13-210ENST00000494402 FAM229BQ4G0N7 80 aa4.37□□□□□ -1.71
SNX13-210ENST00000494402 TDRD6O60522 2096 aaKnown RBP4.37□□□□□ -1.71
SNX13-210ENST00000494402 CECR2Q9BXF3 1484 aa4.37□□□□□ -1.71
SNX13-210ENST00000494402 EML6Q6ZMW3 1958 aa4.36□□□□□ -1.71
SNX13-210ENST00000494402 TMEM235A6NFC5 223 aa4.36□□□□□ -1.71
SNX13-210ENST00000494402 C17orf98A8MV24 154 aa4.36□□□□□ -1.71
SNX13-210ENST00000494402 H3BPC8 53 aa4.36□□□□□ -1.71
SNX13-210ENST00000494402 CCDC179H3BU77 68 aa4.36□□□□□ -1.71
SNX13-210ENST00000494402 TPT1P13693 172 aaKnown RBP4.36□□□□□ -1.71
SNX13-210ENST00000494402 ZNF19P17023 458 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms