RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 SAP30O75446 220 aa15.69■□□□□ 0.1
COL27A1-207ENST00000494090 TNFSF13O75888 250 aa15.69■□□□□ 0.1
COL27A1-207ENST00000494090 BMPERQ8N8U9 685 aa15.69■□□□□ 0.1
COL27A1-207ENST00000494090 ZNF581Q9P0T4 197 aa15.69■□□□□ 0.1
COL27A1-207ENST00000494090 ESPL1Q14674 2120 aa15.69■□□□□ 0.1
COL27A1-207ENST00000494090 C5orf64Q2M2E5 130 aa15.69■□□□□ 0.1
COL27A1-207ENST00000494090 ACTL10Q5JWF8 245 aa15.69■□□□□ 0.1
COL27A1-207ENST00000494090 C5orf24Q7Z6I8 188 aa15.69■□□□□ 0.1
COL27A1-207ENST00000494090 LINC00473A8K010 186 aa15.69■□□□□ 0.1
COL27A1-207ENST00000494090 H3BUT2 72 aa15.69■□□□□ 0.1
COL27A1-207ENST00000494090 ZNF688P0C7X2 276 aa15.69■□□□□ 0.1
COL27A1-207ENST00000494090 E9PQ18 207 aa15.69■□□□□ 0.1
COL27A1-207ENST00000494090 A0A0G2JNJ9 132 aa15.68■□□□□ 0.1
COL27A1-207ENST00000494090 MORN3Q6PF18 240 aaPredicted RBP15.68■□□□□ 0.1
COL27A1-207ENST00000494090 DERL1Q9BUN8 251 aa15.68■□□□□ 0.1
COL27A1-207ENST00000494090 Q9UFV3 132 aa15.68■□□□□ 0.1
COL27A1-207ENST00000494090 INTS1Q8N201 2190 aaKnown RBP15.68■□□□□ 0.1
COL27A1-207ENST00000494090 GNLYP22749 145 aa15.68■□□□□ 0.1
COL27A1-207ENST00000494090 CHTOPQ9Y3Y2 248 aaKnown RBP15.68■□□□□ 0.1
COL27A1-207ENST00000494090 OR9G4Q8NGQ1 327 aa15.68■□□□□ 0.1
COL27A1-207ENST00000494090 PSG1P11464 419 aa15.68■□□□□ 0.1
COL27A1-207ENST00000494090 LINC00469Q8N7U9 141 aa15.68■□□□□ 0.1
COL27A1-207ENST00000494090 C1QTNF4Q9BXJ3 329 aa15.68■□□□□ 0.1
COL27A1-207ENST00000494090 GVINP1Q7Z2Y8 2422 aa15.67■□□□□ 0.1
COL27A1-207ENST00000494090 NTF4P34130 210 aa15.67■□□□□ 0.1
COL27A1-207ENST00000494090 TMEM155Q4W5P6 130 aa15.67■□□□□ 0.1
COL27A1-207ENST00000494090 SLC25A39Q9BZJ4 359 aaPredicted RBP15.67■□□□□ 0.1
COL27A1-207ENST00000494090 SRSF8Q9BRL6 282 aaKnown RBP15.67■□□□□ 0.1
COL27A1-207ENST00000494090 EP300Q09472 2414 aaPredicted RBP15.67■□□□□ 0.1
COL27A1-207ENST00000494090 FAM223BA6NKX1 122 aa15.67■□□□□ 0.1
COL27A1-207ENST00000494090 FAM223AQ8IWN6 122 aa15.67■□□□□ 0.1
COL27A1-207ENST00000494090 LINC00477Q96M19 166 aa15.67■□□□□ 0.1
COL27A1-207ENST00000494090 H0YJW9 148 aa15.66■□□□□ 0.1
COL27A1-207ENST00000494090 H3BUX3 64 aa15.66■□□□□ 0.1
COL27A1-207ENST00000494090 TMEM8BA6NDV4 472 aa15.66■□□□□ 0.1
COL27A1-207ENST00000494090 ZNF415Q09FC8 603 aa15.66■□□□□ 0.1
COL27A1-207ENST00000494090 IFI27L1Q96BM0 104 aa15.66■□□□□ 0.1
COL27A1-207ENST00000494090 NDUFS8O00217 210 aa15.66■□□□□ 0.1
COL27A1-207ENST00000494090 MS4A6AQ9H2W1 248 aa15.66■□□□□ 0.1
COL27A1-207ENST00000494090 CACNA1DQ01668 2161 aa15.66■□□□□ 0.1
COL27A1-207ENST00000494090 ZNF815PA8K554 130 aa15.66■□□□□ 0.1
COL27A1-207ENST00000494090 C15orf62A8K5M9 175 aa15.66■□□□□ 0.1
COL27A1-207ENST00000494090 PMS2P5A8MQ11 134 aa15.66■□□□□ 0.1
COL27A1-207ENST00000494090 ZNF138P52744 262 aa15.66■□□□□ 0.1
COL27A1-207ENST00000494090 A0A087WX48 190 aa15.65■□□□□ 0.1
COL27A1-207ENST00000494090 A0A0G2JRQ6 117 aa15.65■□□□□ 0.1
COL27A1-207ENST00000494090 TCRAP04437 139 aa15.65■□□□□ 0.1
COL27A1-207ENST00000494090 GAFA1Q96PS6 74 aa15.65■□□□□ 0.1
COL27A1-207ENST00000494090 RPL36AP83881 106 aaKnown RBP15.65■□□□□ 0.1
COL27A1-207ENST00000494090 LYPD1Q8N2G4 141 aa15.65■□□□□ 0.1
COL27A1-207ENST00000494090 RPL36ALQ969Q0 106 aaKnown RBP15.65■□□□□ 0.1
COL27A1-207ENST00000494090 RCHY1Q96PM5 261 aa15.65■□□□□ 0.1
COL27A1-207ENST00000494090 IGKCP01834 107 aa15.65■□□□□ 0.1
COL27A1-207ENST00000494090 BUB1B-PAK6H3BSN5 160 aa15.65■□□□□ 0.1
COL27A1-207ENST00000494090 CD33P20138 364 aa15.65■□□□□ 0.1
COL27A1-207ENST00000494090 PPIFP30405 207 aaKnown RBP15.65■□□□□ 0.1
COL27A1-207ENST00000494090 C3orf36Q3SXR2 165 aa15.65■□□□□ 0.1
COL27A1-207ENST00000494090 RNF166Q96A37 237 aaPredicted RBP15.65■□□□□ 0.1
COL27A1-207ENST00000494090 THSD7BQ9C0I4 1608 aa15.65■□□□□ 0.1
COL27A1-207ENST00000494090 ETV2O00321 342 aaPredicted RBP15.64■□□□□ 0.1
COL27A1-207ENST00000494090 ADCYAP1P18509 176 aa15.64■□□□□ 0.1
COL27A1-207ENST00000494090 ERVK11-1P61568 191 aa15.64■□□□□ 0.1
COL27A1-207ENST00000494090 ORAOV1Q8WV07 137 aa15.64■□□□□ 0.1
COL27A1-207ENST00000494090 LINC00527Q9UJ94 153 aa15.64■□□□□ 0.1
COL27A1-207ENST00000494090 MSRB2Q9Y3D2 182 aa15.64■□□□□ 0.09
COL27A1-207ENST00000494090 IGKV1D-17A0A075B6S4 117 aa15.64■□□□□ 0.09
COL27A1-207ENST00000494090 SEC11AP67812 179 aa15.64■□□□□ 0.09
COL27A1-207ENST00000494090 C1orf194Q5T5A4 169 aa15.64■□□□□ 0.09
COL27A1-207ENST00000494090 SCRT1Q9BWW7 348 aa15.64■□□□□ 0.09
COL27A1-207ENST00000494090 NHP2Q9NX24 153 aaKnown RBP15.64■□□□□ 0.09
COL27A1-207ENST00000494090 NPIPB5A8MRT5 1133 aa15.64■□□□□ 0.09
COL27A1-207ENST00000494090 FNDC10F2Z333 226 aa15.64■□□□□ 0.09
COL27A1-207ENST00000494090 LINC01356Q8N9X3 169 aa15.64■□□□□ 0.09
COL27A1-207ENST00000494090 TMEM219Q86XT9 240 aa15.64■□□□□ 0.09
COL27A1-207ENST00000494090 C11orf44Q8N8P7 122 aa15.64■□□□□ 0.09
COL27A1-207ENST00000494090 RNF114Q9Y508 228 aa15.64■□□□□ 0.09
COL27A1-207ENST00000494090 GATA3P23771 443 aa15.63■□□□□ 0.09
COL27A1-207ENST00000494090 PAX2Q02962 417 aa15.63■□□□□ 0.09
COL27A1-207ENST00000494090 Q6ZRM9 215 aa15.63■□□□□ 0.09
COL27A1-207ENST00000494090 LAGE3Q14657 143 aa15.63■□□□□ 0.09
COL27A1-207ENST00000494090 EXOC3-AS1Q8N2X6 119 aa15.63■□□□□ 0.09
COL27A1-207ENST00000494090 IGKV3D-20A0A0C4DH25 116 aa15.63■□□□□ 0.09
COL27A1-207ENST00000494090 KLRD1Q13241 179 aa15.63■□□□□ 0.09
COL27A1-207ENST00000494090 LHFPL4Q7Z7J7 247 aa15.63■□□□□ 0.09
COL27A1-207ENST00000494090 ANAPC10Q9UM13 185 aa15.63■□□□□ 0.09
COL27A1-207ENST00000494090 OR2K2Q8NGT1 345 aa15.63■□□□□ 0.09
COL27A1-207ENST00000494090 TP53BP1Q12888 1972 aaPredicted RBP15.62■□□□□ 0.09
COL27A1-207ENST00000494090 GZMBP10144 247 aa15.62■□□□□ 0.09
COL27A1-207ENST00000494090 EVI2AP22794 236 aa15.62■□□□□ 0.09
COL27A1-207ENST00000494090 UBE2DNLQ8IWF7 75 aa15.62■□□□□ 0.09
COL27A1-207ENST00000494090 SPOCK3Q9BQ16 436 aa15.62■□□□□ 0.09
COL27A1-207ENST00000494090 CEP250Q9BV73 2442 aa15.62■□□□□ 0.09
COL27A1-207ENST00000494090 MST1LQ2TV78 715 aa15.62■□□□□ 0.09
COL27A1-207ENST00000494090 FAM90A2PQ658T7 463 aa15.62■□□□□ 0.09
COL27A1-207ENST00000494090 OR5A1Q8NGJ0 315 aa15.62■□□□□ 0.09
COL27A1-207ENST00000494090 IGKV2-40A0A087WW87 121 aaPredicted RBP15.61■□□□□ 0.09
COL27A1-207ENST00000494090 ITGB1BP1O14713 200 aa15.61■□□□□ 0.09
COL27A1-207ENST00000494090 IGKV2D-40P01614 121 aaPredicted RBP15.61■□□□□ 0.09
COL27A1-207ENST00000494090 SIGLEC9Q9Y336 463 aa15.61■□□□□ 0.09
COL27A1-207ENST00000494090 A0A1B0GV72 72 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms