RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 CSMD1Q96PZ7 3565 aa11.03□□□□□ -0.64
VCP-207ENST00000493886 A0A1W2PPR1 153 aa11.03□□□□□ -0.64
VCP-207ENST00000493886 MT-CO2P00403 227 aa11.03□□□□□ -0.64
VCP-207ENST00000493886 CRYGBP07316 175 aa11.03□□□□□ -0.64
VCP-207ENST00000493886 CRISP2P16562 243 aa11.03□□□□□ -0.64
VCP-207ENST00000493886 CDKN1AP38936 164 aa11.03□□□□□ -0.64
VCP-207ENST00000493886 SMAGPQ0VAQ4 97 aa11.03□□□□□ -0.64
VCP-207ENST00000493886 FNDC4Q9H6D8 234 aaPredicted RBP11.03□□□□□ -0.64
VCP-207ENST00000493886 IL36BQ9NZH7 164 aa11.03□□□□□ -0.64
VCP-207ENST00000493886 SIVA1O15304 175 aa11.02□□□□□ -0.64
VCP-207ENST00000493886 CA1P00915 261 aaPredicted RBP11.02□□□□□ -0.64
VCP-207ENST00000493886 MGST1P10620 155 aaKnown RBP11.02□□□□□ -0.64
VCP-207ENST00000493886 GNG4P50150 75 aa11.02□□□□□ -0.64
VCP-207ENST00000493886 PRR31Q5SQ13 230 aa11.02□□□□□ -0.64
VCP-207ENST00000493886 BAGE3Q86Y29 109 aa11.02□□□□□ -0.64
VCP-207ENST00000493886 BAGE2Q86Y30 109 aa11.02□□□□□ -0.64
VCP-207ENST00000493886 LY6LH3BQJ8 138 aa11.02□□□□□ -0.65
VCP-207ENST00000493886 REG1AP05451 166 aa11.02□□□□□ -0.65
VCP-207ENST00000493886 TNXAQ16473 311 aa11.02□□□□□ -0.65
VCP-207ENST00000493886 Q6ZWC4 215 aa11.02□□□□□ -0.65
VCP-207ENST00000493886 HSPB9Q9BQS6 159 aa11.02□□□□□ -0.65
VCP-207ENST00000493886 SIGLEC9Q9Y336 463 aa11.02□□□□□ -0.65
VCP-207ENST00000493886 ARHGAP32A7KAX9 2087 aa11.02□□□□□ -0.65
VCP-207ENST00000493886 RPL27AP46776 148 aaKnown RBP11.02□□□□□ -0.65
VCP-207ENST00000493886 UQCRFS1P47985 274 aa11.02□□□□□ -0.65
VCP-207ENST00000493886 SUMO1P63165 101 aaKnown RBP11.02□□□□□ -0.65
VCP-207ENST00000493886 RPEL1Q2QD12 228 aa11.02□□□□□ -0.65
VCP-207ENST00000493886 MORN5Q5VZ52 161 aa11.02□□□□□ -0.65
VCP-207ENST00000493886 SSBP3Q9BWW4 388 aaPredicted RBP11.02□□□□□ -0.65
VCP-207ENST00000493886 HRNRQ86YZ3 2850 aaPredicted RBP11.01□□□□□ -0.65
VCP-207ENST00000493886 TRAV5A0A0B4J249 113 aa11.01□□□□□ -0.65
VCP-207ENST00000493886 IGLC7A0M8Q6 106 aa11.01□□□□□ -0.65
VCP-207ENST00000493886 HELTA6NFD8 242 aa11.01□□□□□ -0.65
VCP-207ENST00000493886 GGTLC3B5MD39 225 aa11.01□□□□□ -0.65
VCP-207ENST00000493886 CKS1BP61024 79 aa11.01□□□□□ -0.65
VCP-207ENST00000493886 MRPL54Q6P161 138 aaKnown RBP11.01□□□□□ -0.65
VCP-207ENST00000493886 ITLN2Q8WWU7 325 aaPredicted RBP11.01□□□□□ -0.65
VCP-207ENST00000493886 ZNF503Q96F45 646 aa11.01□□□□□ -0.65
VCP-207ENST00000493886 C19orf24Q9BVV8 132 aa11.01□□□□□ -0.65
VCP-207ENST00000493886 SAMD10Q9BYL1 202 aa11.01□□□□□ -0.65
VCP-207ENST00000493886 SERTAD4Q9NUC0 356 aa11.01□□□□□ -0.65
VCP-207ENST00000493886 FBLL1A6NHQ2 334 aaKnown RBP11.01□□□□□ -0.65
VCP-207ENST00000493886 YPEL3P61236 119 aaPredicted RBP11.01□□□□□ -0.65
VCP-207ENST00000493886 SSBP2P81877 361 aaPredicted RBP11.01□□□□□ -0.65
VCP-207ENST00000493886 LINC00479Q96M42 142 aa11.01□□□□□ -0.65
VCP-207ENST00000493886 TECRQ9NZ01 308 aaKnown RBP11.01□□□□□ -0.65
VCP-207ENST00000493886 TRAV34A0A0B4J273 112 aa11□□□□□ -0.65
VCP-207ENST00000493886 LGALS4P56470 323 aa11□□□□□ -0.65
VCP-207ENST00000493886 VN1R17PQ8TDU5 208 aa11□□□□□ -0.65
VCP-207ENST00000493886 NPIPB3Q92617 1050 aa11□□□□□ -0.65
VCP-207ENST00000493886 NAT8BQ9UHF3 227 aa11□□□□□ -0.65
VCP-207ENST00000493886 RNF114Q9Y508 228 aa11□□□□□ -0.65
VCP-207ENST00000493886 V9GYV3 84 aa11□□□□□ -0.65
VCP-207ENST00000493886 DCHS2Q6V1P9 2916 aa11□□□□□ -0.65
VCP-207ENST00000493886 TRAV30A0A087WSZ9 112 aa11□□□□□ -0.65
VCP-207ENST00000493886 HCP5Q6MZN7 132 aa11□□□□□ -0.65
VCP-207ENST00000493886 PPP1R27Q86WC6 154 aa11□□□□□ -0.65
VCP-207ENST00000493886 BTF3L4Q96K17 158 aa11□□□□□ -0.65
VCP-207ENST00000493886 SPXQ9BT56 116 aa11□□□□□ -0.65
VCP-207ENST00000493886 GTSF1LQ9H1H1 148 aa11□□□□□ -0.65
VCP-207ENST00000493886 M0R1W7 72 aa10.99□□□□□ -0.65
VCP-207ENST00000493886 GNLYP22749 145 aa10.99□□□□□ -0.65
VCP-207ENST00000493886 OR11H6Q8NGC7 330 aa10.99□□□□□ -0.65
VCP-207ENST00000493886 AREGP15514 252 aa10.99□□□□□ -0.65
VCP-207ENST00000493886 HTR1DP28221 377 aa10.99□□□□□ -0.65
VCP-207ENST00000493886 FBXL15Q9H469 300 aa10.99□□□□□ -0.65
VCP-207ENST00000493886 TMEM167BQ9NRX6 74 aa10.99□□□□□ -0.65
VCP-207ENST00000493886 MRPL36Q9P0J6 103 aaKnown RBP10.99□□□□□ -0.65
VCP-207ENST00000493886 PIEZO1Q92508 2521 aa10.99□□□□□ -0.65
VCP-207ENST00000493886 PSMB11A5LHX3 300 aa10.98□□□□□ -0.65
VCP-207ENST00000493886 TIMM23O14925 209 aa10.98□□□□□ -0.65
VCP-207ENST00000493886 APELAP0DMC3 54 aa10.98□□□□□ -0.65
VCP-207ENST00000493886 HINT1P49773 126 aaPredicted RBP10.98□□□□□ -0.65
VCP-207ENST00000493886 TPPP2P59282 170 aa10.98□□□□□ -0.65
VCP-207ENST00000493886 TAS2R45P59539 299 aa10.98□□□□□ -0.65
VCP-207ENST00000493886 C11orf52Q96A22 123 aa10.98□□□□□ -0.65
VCP-207ENST00000493886 RNF5Q99942 180 aa10.98□□□□□ -0.65
VCP-207ENST00000493886 UBTD1Q9HAC8 227 aa10.98□□□□□ -0.65
VCP-207ENST00000493886 DPM3Q9P2X0 92 aa10.98□□□□□ -0.65
VCP-207ENST00000493886 IGKV1D-37A0A075B6S9 117 aa10.98□□□□□ -0.65
VCP-207ENST00000493886 PYYP10082 97 aa10.98□□□□□ -0.65
VCP-207ENST00000493886 GPR6P46095 362 aaPredicted RBP10.98□□□□□ -0.65
VCP-207ENST00000493886 MFAP2P55001 183 aa10.98□□□□□ -0.65
VCP-207ENST00000493886 KLRD1Q13241 179 aa10.98□□□□□ -0.65
VCP-207ENST00000493886 PVRIGQ6DKI7 326 aa10.98□□□□□ -0.65
VCP-207ENST00000493886 THAP8Q8NA92 274 aa10.98□□□□□ -0.65
VCP-207ENST00000493886 SGK494Q96LW2 274 aa10.98□□□□□ -0.65
VCP-207ENST00000493886 SLC25A33Q9BSK2 321 aa10.98□□□□□ -0.65
VCP-207ENST00000493886 GNB4Q9HAV0 340 aa10.98□□□□□ -0.65
VCP-207ENST00000493886 ARL2-SNX15V9GYD0 113 aa10.98□□□□□ -0.65
VCP-207ENST00000493886 TCRBV4S1A1TA0A5B7 111 aa10.98□□□□□ -0.65
VCP-207ENST00000493886 C9JCJ5 164 aa10.98□□□□□ -0.65
VCP-207ENST00000493886 NDUFS7O75251 213 aa10.98□□□□□ -0.65
VCP-207ENST00000493886 AZU1P20160 251 aa10.98□□□□□ -0.65
VCP-207ENST00000493886 PMCHP20382 165 aa10.98□□□□□ -0.65
VCP-207ENST00000493886 PRTN3P24158 256 aa10.98□□□□□ -0.65
VCP-207ENST00000493886 KRTDAPP60985 99 aa10.98□□□□□ -0.65
VCP-207ENST00000493886 TIGITQ495A1 244 aa10.98□□□□□ -0.65
VCP-207ENST00000493886 MRPL32Q9BYC8 188 aaKnown RBP10.98□□□□□ -0.65
VCP-207ENST00000493886 ITPR1Q14643 2758 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms