RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 TEX48A0A1B0GUV7 120 aa11.92□□□□□ -0.5
PTPRU-208ENST00000493601 ISLRO14498 428 aa11.92□□□□□ -0.5
PTPRU-208ENST00000493601 SPART-AS1P0CW21 52 aa11.92□□□□□ -0.5
PTPRU-208ENST00000493601 IAPPP10997 89 aa11.92□□□□□ -0.5
PTPRU-208ENST00000493601 VAMP1P23763 118 aa11.92□□□□□ -0.5
PTPRU-208ENST00000493601 RPP30P78346 268 aaKnown RBP11.92□□□□□ -0.5
PTPRU-208ENST00000493601 OR2F1Q13607 317 aa11.92□□□□□ -0.5
PTPRU-208ENST00000493601 OR8I2Q8N0Y5 310 aa11.92□□□□□ -0.5
PTPRU-208ENST00000493601 TOMM5Q8N4H5 51 aa11.92□□□□□ -0.5
PTPRU-208ENST00000493601 LRTM2Q8N967 370 aa11.92□□□□□ -0.5
PTPRU-208ENST00000493601 ZNF709Q8N972 641 aa11.92□□□□□ -0.5
PTPRU-208ENST00000493601 TRIM63Q969Q1 353 aa11.92□□□□□ -0.5
PTPRU-208ENST00000493601 CIB3Q96Q77 187 aaPredicted RBP11.92□□□□□ -0.5
PTPRU-208ENST00000493601 PAIP2BQ9ULR5 123 aaKnown RBP11.92□□□□□ -0.5
PTPRU-208ENST00000493601 RFNGQ9Y644 331 aa11.92□□□□□ -0.5
PTPRU-208ENST00000493601 IGHV3OR16-12A0A075B7B8 117 aa11.91□□□□□ -0.5
PTPRU-208ENST00000493601 CFDP00746 253 aaPredicted RBP11.91□□□□□ -0.5
PTPRU-208ENST00000493601 MEOX2P50222 304 aa11.91□□□□□ -0.5
PTPRU-208ENST00000493601 EMP1P54849 157 aa11.91□□□□□ -0.5
PTPRU-208ENST00000493601 FXYD7P58549 80 aa11.91□□□□□ -0.5
PTPRU-208ENST00000493601 DEFB1P60022 68 aa11.91□□□□□ -0.5
PTPRU-208ENST00000493601 ZNF79Q15937 498 aa11.91□□□□□ -0.5
PTPRU-208ENST00000493601 PYDC2Q56P42 97 aa11.91□□□□□ -0.5
PTPRU-208ENST00000493601 EBLN2Q6P2I7 272 aa11.91□□□□□ -0.5
PTPRU-208ENST00000493601 LINC00336Q6ZUF6 198 aa11.91□□□□□ -0.5
PTPRU-208ENST00000493601 THAP8Q8NA92 274 aa11.91□□□□□ -0.5
PTPRU-208ENST00000493601 OR4B1Q8NGF8 309 aa11.91□□□□□ -0.5
PTPRU-208ENST00000493601 DEDD2Q8WXF8 326 aa11.91□□□□□ -0.5
PTPRU-208ENST00000493601 TMED3Q9Y3Q3 217 aa11.91□□□□□ -0.5
PTPRU-208ENST00000493601 IGKV1OR2-108A0A075B7D4 117 aa11.9□□□□□ -0.5
PTPRU-208ENST00000493601 GALR1P47211 349 aa11.9□□□□□ -0.5
PTPRU-208ENST00000493601 PAX9P55771 341 aa11.9□□□□□ -0.5
PTPRU-208ENST00000493601 GGNBP1Q5YKI7 109 aa11.9□□□□□ -0.5
PTPRU-208ENST00000493601 POM121L12Q8N7R1 296 aa11.9□□□□□ -0.5
PTPRU-208ENST00000493601 SLC25A21Q9BQT8 299 aaPredicted RBP11.9□□□□□ -0.5
PTPRU-208ENST00000493601 RPRMQ9NS64 109 aa11.9□□□□□ -0.5
PTPRU-208ENST00000493601 SLC45A2Q9UMX9 530 aa11.9□□□□□ -0.5
PTPRU-208ENST00000493601 GOLT1BQ9Y3E0 138 aa11.9□□□□□ -0.5
PTPRU-208ENST00000493601 S100A7P31151 101 aa11.89□□□□□ -0.51
PTPRU-208ENST00000493601 PSG9Q00887 426 aa11.89□□□□□ -0.51
PTPRU-208ENST00000493601 FAM78BQ5VT40 261 aa11.89□□□□□ -0.51
PTPRU-208ENST00000493601 SLC35B3Q9H1N7 401 aa11.89□□□□□ -0.51
PTPRU-208ENST00000493601 HERC2O95714 4834 aa11.88□□□□□ -0.51
PTPRU-208ENST00000493601 A0A0J9YX75 114 aa11.88□□□□□ -0.51
PTPRU-208ENST00000493601 SYNGR2O43760 224 aa11.88□□□□□ -0.51
PTPRU-208ENST00000493601 FAM210BQ96KR6 192 aa11.88□□□□□ -0.51
PTPRU-208ENST00000493601 C16orf92Q96LL3 132 aa11.88□□□□□ -0.51
PTPRU-208ENST00000493601 C7orf50Q9BRJ6 194 aaKnown RBP11.88□□□□□ -0.51
PTPRU-208ENST00000493601 SCRT1Q9BWW7 348 aa11.88□□□□□ -0.51
PTPRU-208ENST00000493601 MAGT1Q9H0U3 335 aa11.88□□□□□ -0.51
PTPRU-208ENST00000493601 SLC25A32Q9H2D1 315 aa11.88□□□□□ -0.51
PTPRU-208ENST00000493601 SLC25A22Q9H936 323 aa11.88□□□□□ -0.51
PTPRU-208ENST00000493601 DKK2Q9UBU2 259 aa11.88□□□□□ -0.51
PTPRU-208ENST00000493601 V9GYH0 126 aa11.88□□□□□ -0.51
PTPRU-208ENST00000493601 PRSS46E5RG02 174 aa11.87□□□□□ -0.51
PTPRU-208ENST00000493601 F6UB75 175 aa11.87□□□□□ -0.51
PTPRU-208ENST00000493601 SFT2D2O95562 160 aa11.87□□□□□ -0.51
PTPRU-208ENST00000493601 HBE1P02100 147 aa11.87□□□□□ -0.51
PTPRU-208ENST00000493601 AKR1C1Q04828 323 aa11.87□□□□□ -0.51
PTPRU-208ENST00000493601 PPP1R1AQ13522 171 aa11.87□□□□□ -0.51
PTPRU-208ENST00000493601 FAM222AQ5U5X8 452 aa11.87□□□□□ -0.51
PTPRU-208ENST00000493601 BPIFCQ8NFQ6 507 aa11.87□□□□□ -0.51
PTPRU-208ENST00000493601 GPR82Q96P67 336 aa11.87□□□□□ -0.51
PTPRU-208ENST00000493601 NIPSNAP3BQ9BS92 247 aa11.87□□□□□ -0.51
PTPRU-208ENST00000493601 DOK5Q9P104 306 aa11.87□□□□□ -0.51
PTPRU-208ENST00000493601 ZNF98A6NK75 572 aa11.86□□□□□ -0.51
PTPRU-208ENST00000493601 WRBO00258 174 aa11.86□□□□□ -0.51
PTPRU-208ENST00000493601 S100A5P33763 92 aa11.86□□□□□ -0.51
PTPRU-208ENST00000493601 SPANXN5Q5MJ07 72 aa11.86□□□□□ -0.51
PTPRU-208ENST00000493601 OR4D5Q8NGN0 318 aa11.86□□□□□ -0.51
PTPRU-208ENST00000493601 OR1B1Q8NGR6 318 aa11.86□□□□□ -0.51
PTPRU-208ENST00000493601 TMEM147Q9BVK8 224 aa11.86□□□□□ -0.51
PTPRU-208ENST00000493601 LOC102723971A0A1B0GUV8 181 aa11.85□□□□□ -0.51
PTPRU-208ENST00000493601 HOXB5P09067 269 aa11.85□□□□□ -0.51
PTPRU-208ENST00000493601 ORM2P19652 201 aa11.85□□□□□ -0.51
PTPRU-208ENST00000493601 UBE2MP61081 183 aaKnown RBP11.85□□□□□ -0.51
PTPRU-208ENST00000493601 OXA1LQ15070 435 aa11.85□□□□□ -0.51
PTPRU-208ENST00000493601 GSG1LQ6UXU4 331 aa11.85□□□□□ -0.51
PTPRU-208ENST00000493601 ACOT7LQ6ZUV0 252 aa11.85□□□□□ -0.51
PTPRU-208ENST00000493601 C1orf158Q8N1D5 194 aa11.85□□□□□ -0.51
PTPRU-208ENST00000493601 C20orf173Q96LM9 149 aa11.85□□□□□ -0.51
PTPRU-208ENST00000493601 RSG1Q9BU20 258 aa11.85□□□□□ -0.51
PTPRU-208ENST00000493601 KRTAP17-1Q9BYP8 105 aa11.85□□□□□ -0.51
PTPRU-208ENST00000493601 STRAPQ9Y3F4 350 aaKnown RBP11.85□□□□□ -0.51
PTPRU-208ENST00000493601 A8MTW9 85 aa11.84□□□□□ -0.51
PTPRU-208ENST00000493601 H3BP45 60 aa11.84□□□□□ -0.51
PTPRU-208ENST00000493601 IFNA21P01568 189 aa11.84□□□□□ -0.51
PTPRU-208ENST00000493601 RRN3P1Q2M238 152 aa11.84□□□□□ -0.51
PTPRU-208ENST00000493601 UBE2DNLQ8IWF7 75 aa11.84□□□□□ -0.51
PTPRU-208ENST00000493601 TMEM208Q9BTX3 173 aa11.84□□□□□ -0.51
PTPRU-208ENST00000493601 YTHDF2Q9Y5A9 579 aaKnown RBP11.84□□□□□ -0.51
PTPRU-208ENST00000493601 HTN3P15516 51 aa11.83□□□□□ -0.52
PTPRU-208ENST00000493601 GATA2P23769 480 aaPredicted RBP11.83□□□□□ -0.52
PTPRU-208ENST00000493601 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.83□□□□□ -0.52
PTPRU-208ENST00000493601 IGF2BP2-AS1Q96M15 143 aa11.83□□□□□ -0.52
PTPRU-208ENST00000493601 SMCO3A2RU48 225 aa11.82□□□□□ -0.52
PTPRU-208ENST00000493601 CCDC160A6NGH7 325 aa11.82□□□□□ -0.52
PTPRU-208ENST00000493601 M0R2N4 97 aa11.82□□□□□ -0.52
PTPRU-208ENST00000493601 DUSP14O95147 198 aaKnown RBP11.82□□□□□ -0.52
PTPRU-208ENST00000493601 LGALS9BQ3B8N2 356 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms