RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 IGLV11-55A0A075B6I3 123 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 TRAV26-1A0A087WT03 109 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 TEX50A0A1B0GTY4 177 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 FBLL1A6NHQ2 334 aaKnown RBP2.02□□□□□ -2.09
PTCD3-218ENST00000493430 UPK2O00526 184 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 PDCD5O14737 125 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 AIREO43918 545 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 CA11O75493 328 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 KRASP01116 189 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 IGKV1-5P01602 117 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 HLA-DQB1P01920 261 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 SNRPCP09234 159 aaKnown RBP2.02□□□□□ -2.09
PTCD3-218ENST00000493430 OR5H8P0DN80 308 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 OR13C7P0DN81 318 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 GALP22466 123 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 GNRHRP30968 328 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 FGF9P31371 208 aaPredicted RBP2.02□□□□□ -2.09
PTCD3-218ENST00000493430 HRH1P35367 487 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 FXYD7P58549 80 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 ARPC4P59998 168 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 UBE2KP61086 200 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 RUNX1Q01196 453 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 RTL8BQ17RB0 113 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 RPEL1Q2QD12 228 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 GPR107Q5VW38 600 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 HACD4Q5VWC8 232 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 ZNF660Q6AZW8 331 aaPredicted RBP2.02□□□□□ -2.09
PTCD3-218ENST00000493430 FAM71F2Q6NXP2 309 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 STEAP1BQ6NZ63 245 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 ZNF562Q6V9R5 426 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 RPP25LQ8N5L8 163 aaKnown RBP2.02□□□□□ -2.09
PTCD3-218ENST00000493430 MUC7Q8TAX7 377 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 TMEM167AQ8TBQ9 72 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 DYNLRB2Q8TF09 96 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 OR4C12Q96R67 309 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 TP53RKQ96S44 253 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 TM2D3Q9BRN9 247 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 C20orf24Q9BUV8 137 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 GPR61Q9BZJ8 451 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 IFT46Q9NQC8 304 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 MBD2Q9UBB5 411 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 GHRLQ9UBU3 117 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 PEF1Q9UBV8 284 aaKnown RBP2.02□□□□□ -2.09
PTCD3-218ENST00000493430 RPH3ALQ9UNE2 315 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 SSR3Q9UNL2 185 aa2.02□□□□□ -2.09
PTCD3-218ENST00000493430 DNAH10Q8IVF4 4471 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 BIRC6Q9NR09 4857 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.01□□□□□ -2.09
PTCD3-218ENST00000493430 TRBV9A0A0B4J1U6 114 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 LCE6AA0A183 80 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 LINC00854A0A1B0GVQ3 168 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 KNCNA6PVL3 124 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 OR11H12B2RN74 326 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 FAM25AB3EWG3 89 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 FAM25CB3EWG5 89 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 FAM25GB3EWG6 89 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 K7EIM0 57 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 L7N2F9 121 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 ITGB1BP1O14713 200 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 NUPL2O15504 423 aaKnown RBP2.01□□□□□ -2.09
PTCD3-218ENST00000493430 CCNKO75909 580 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 SCGNO76038 276 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 OR2A4O95047 310 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 CD3DP04234 171 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 PRM2P04554 102 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 CTSDP07339 412 aaPredicted RBP2.01□□□□□ -2.09
PTCD3-218ENST00000493430 P0C879 139 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 CTRB1P17538 263 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 HLA-GP17693 338 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 DTYMKP23919 212 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 PSMA1P25786 263 aaKnown RBP2.01□□□□□ -2.09
PTCD3-218ENST00000493430 PSMB6P28072 239 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 ETV6P41212 452 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 PSMD7P51665 324 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 UBE2MP61081 183 aaKnown RBP2.01□□□□□ -2.09
PTCD3-218ENST00000493430 MRPS15P82914 257 aaKnown RBP2.01□□□□□ -2.09
PTCD3-218ENST00000493430 ATP5G2Q06055 141 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 FGL1Q08830 312 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 TRAM1Q15629 374 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 DEFB114Q30KQ6 69 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 VMA21Q3ZAQ7 101 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 TIGITQ495A1 244 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 AKIRIN2Q53H80 203 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 UBE2NLQ5JXB2 153 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 LY6G6FQ5SQ64 297 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 TMEM69Q5SWH9 247 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 CTRB2Q6GPI1 263 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 CNIH2Q6PI25 160 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 CENPSQ8N2Z9 138 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 COMMD1Q8N668 190 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 OR6Q1Q8NGQ2 317 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 OR13C8Q8NGS7 320 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 OR5H2Q8NGV7 314 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 OR4S2Q8NH73 311 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 ZNF502Q8TBZ5 544 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 MARCH1Q8TCQ1 289 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 GPX8Q8TED1 209 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 SLC25A46Q96AG3 418 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 OR2A7Q96R45 310 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 RNF2Q99496 336 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms