RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 GGNBP1Q5YKI7 109 aa12.43□□□□□ -0.42
SGMS1-204ENST00000492601 OR8I2Q8N0Y5 310 aa12.43□□□□□ -0.42
SGMS1-204ENST00000492601 THAP8Q8NA92 274 aa12.43□□□□□ -0.42
SGMS1-204ENST00000492601 COQ8AQ8NI60 647 aa12.43□□□□□ -0.42
SGMS1-204ENST00000492601 CIB3Q96Q77 187 aaPredicted RBP12.43□□□□□ -0.42
SGMS1-204ENST00000492601 PRSS46E5RG02 174 aa12.42□□□□□ -0.42
SGMS1-204ENST00000492601 H3BP45 60 aa12.42□□□□□ -0.42
SGMS1-204ENST00000492601 SOCS3O14543 225 aa12.42□□□□□ -0.42
SGMS1-204ENST00000492601 PSMB3P49720 205 aa12.42□□□□□ -0.42
SGMS1-204ENST00000492601 RPP30P78346 268 aaKnown RBP12.42□□□□□ -0.42
SGMS1-204ENST00000492601 C12orf74Q32Q52 190 aa12.42□□□□□ -0.42
SGMS1-204ENST00000492601 SPANXN5Q5MJ07 72 aa12.42□□□□□ -0.42
SGMS1-204ENST00000492601 SPANXN2Q5MJ10 180 aa12.42□□□□□ -0.42
SGMS1-204ENST00000492601 OR4B1Q8NGF8 309 aa12.42□□□□□ -0.42
SGMS1-204ENST00000492601 DEDD2Q8WXF8 326 aa12.42□□□□□ -0.42
SGMS1-204ENST00000492601 SAV1Q9H4B6 383 aaPredicted RBP12.42□□□□□ -0.42
SGMS1-204ENST00000492601 IGHV4-4A0A075B6R2 117 aa12.41□□□□□ -0.42
SGMS1-204ENST00000492601 IGHV3OR16-12A0A075B7B8 117 aa12.41□□□□□ -0.42
SGMS1-204ENST00000492601 F6UB75 175 aa12.41□□□□□ -0.42
SGMS1-204ENST00000492601 GATA2P23769 480 aaPredicted RBP12.41□□□□□ -0.42
SGMS1-204ENST00000492601 FOXI2Q6ZQN5 318 aa12.41□□□□□ -0.42
SGMS1-204ENST00000492601 SRRQ9GZT4 340 aa12.41□□□□□ -0.42
SGMS1-204ENST00000492601 RBM38Q9H0Z9 239 aaKnown RBP12.41□□□□□ -0.42
SGMS1-204ENST00000492601 SLC25A22Q9H936 323 aa12.41□□□□□ -0.42
SGMS1-204ENST00000492601 ADAP1O75689 374 aa12.4□□□□□ -0.42
SGMS1-204ENST00000492601 INPP1P49441 399 aa12.4□□□□□ -0.42
SGMS1-204ENST00000492601 EMP1P54849 157 aa12.4□□□□□ -0.42
SGMS1-204ENST00000492601 AKR1C1Q04828 323 aa12.4□□□□□ -0.42
SGMS1-204ENST00000492601 SLC25A32Q9H2D1 315 aa12.4□□□□□ -0.42
SGMS1-204ENST00000492601 STRAPQ9Y3F4 350 aaKnown RBP12.4□□□□□ -0.42
SGMS1-204ENST00000492601 HECTD4Q9Y4D8 3996 aa12.4□□□□□ -0.42
SGMS1-204ENST00000492601 DEFB131BA0A096LNP1 70 aa12.39□□□□□ -0.43
SGMS1-204ENST00000492601 LINC00854A0A1B0GVQ3 168 aa12.39□□□□□ -0.43
SGMS1-204ENST00000492601 C9orf170A2RU37 121 aa12.39□□□□□ -0.43
SGMS1-204ENST00000492601 ISLRO14498 428 aa12.39□□□□□ -0.43
SGMS1-204ENST00000492601 ORM2P19652 201 aa12.39□□□□□ -0.43
SGMS1-204ENST00000492601 BAK1Q16611 211 aa12.39□□□□□ -0.43
SGMS1-204ENST00000492601 TRIQKQ629K1 86 aa12.39□□□□□ -0.43
SGMS1-204ENST00000492601 ZNF705AQ6ZN79 300 aaPredicted RBP12.39□□□□□ -0.43
SGMS1-204ENST00000492601 TMEM182Q6ZP80 229 aaPredicted RBP12.39□□□□□ -0.43
SGMS1-204ENST00000492601 ZNF709Q8N972 641 aa12.39□□□□□ -0.43
SGMS1-204ENST00000492601 C16orf92Q96LL3 132 aa12.39□□□□□ -0.43
SGMS1-204ENST00000492601 C20orf173Q96LM9 149 aa12.39□□□□□ -0.43
SGMS1-204ENST00000492601 SCRT1Q9BWW7 348 aa12.39□□□□□ -0.43
SGMS1-204ENST00000492601 SLC35B3Q9H1N7 401 aa12.39□□□□□ -0.43
SGMS1-204ENST00000492601 FLVCR2Q9UPI3 526 aa12.39□□□□□ -0.43
SGMS1-204ENST00000492601 SMCO3A2RU48 225 aa12.38□□□□□ -0.43
SGMS1-204ENST00000492601 ZNF98A6NK75 572 aa12.38□□□□□ -0.43
SGMS1-204ENST00000492601 ZNF705FA8MVS1 300 aaPredicted RBP12.38□□□□□ -0.43
SGMS1-204ENST00000492601 CFDP00746 253 aaPredicted RBP12.38□□□□□ -0.43
SGMS1-204ENST00000492601 ZNF705DP0CH99 300 aaPredicted RBP12.38□□□□□ -0.43
SGMS1-204ENST00000492601 ZNF705BP0CI00 300 aaPredicted RBP12.38□□□□□ -0.43
SGMS1-204ENST00000492601 GALR1P47211 349 aa12.38□□□□□ -0.43
SGMS1-204ENST00000492601 UBE2MP61081 183 aaKnown RBP12.38□□□□□ -0.43
SGMS1-204ENST00000492601 POLR2GP62487 172 aaKnown RBP eCLIP12.38□□□□□ -0.43
SGMS1-204ENST00000492601 FAM78BQ5VT40 261 aa12.38□□□□□ -0.43
SGMS1-204ENST00000492601 EBLN2Q6P2I7 272 aa12.38□□□□□ -0.43
SGMS1-204ENST00000492601 ACOT7LQ6ZUV0 252 aa12.38□□□□□ -0.43
SGMS1-204ENST00000492601 BPIFCQ8NFQ6 507 aa12.38□□□□□ -0.43
SGMS1-204ENST00000492601 RSG1Q9BU20 258 aa12.38□□□□□ -0.43
SGMS1-204ENST00000492601 RNF126Q9BV68 326 aa12.38□□□□□ -0.43
SGMS1-204ENST00000492601 NDUFB6O95139 128 aa12.37□□□□□ -0.43
SGMS1-204ENST00000492601 PSG9Q00887 426 aa12.37□□□□□ -0.43
SGMS1-204ENST00000492601 ID3Q02535 119 aa12.37□□□□□ -0.43
SGMS1-204ENST00000492601 OR1B1Q8NGR6 318 aa12.37□□□□□ -0.43
SGMS1-204ENST00000492601 C17orf77Q96MU5 243 aa12.37□□□□□ -0.43
SGMS1-204ENST00000492601 NEU1Q99519 415 aa12.37□□□□□ -0.43
SGMS1-204ENST00000492601 RPRMQ9NS64 109 aa12.37□□□□□ -0.43
SGMS1-204ENST00000492601 PSENENQ9NZ42 101 aa12.37□□□□□ -0.43
SGMS1-204ENST00000492601 DOK5Q9P104 306 aa12.37□□□□□ -0.43
SGMS1-204ENST00000492601 DNAH2Q9P225 4427 aa12.37□□□□□ -0.43
SGMS1-204ENST00000492601 A0A0J9YX75 114 aa12.36□□□□□ -0.43
SGMS1-204ENST00000492601 NAP1L6A6NFF2 107 aa12.36□□□□□ -0.43
SGMS1-204ENST00000492601 SSSCA1O60232 199 aa12.36□□□□□ -0.43
SGMS1-204ENST00000492601 MEOX2P50222 304 aa12.36□□□□□ -0.43
SGMS1-204ENST00000492601 PAX9P55771 341 aa12.36□□□□□ -0.43
SGMS1-204ENST00000492601 SPATA31B1PQ5VZV4 182 aa12.36□□□□□ -0.43
SGMS1-204ENST00000492601 CLUHP3Q96NS8 147 aa12.36□□□□□ -0.43
SGMS1-204ENST00000492601 TMEM147Q9BVK8 224 aa12.36□□□□□ -0.43
SGMS1-204ENST00000492601 SLC45A2Q9UMX9 530 aa12.36□□□□□ -0.43
SGMS1-204ENST00000492601 RFNGQ9Y644 331 aa12.36□□□□□ -0.43
SGMS1-204ENST00000492601 SMIM9A6NGZ8 99 aa12.35□□□□□ -0.43
SGMS1-204ENST00000492601 IFNA21P01568 189 aa12.35□□□□□ -0.43
SGMS1-204ENST00000492601 AMBPP02760 352 aa12.35□□□□□ -0.43
SGMS1-204ENST00000492601 OR4E1P0C645 316 aa12.35□□□□□ -0.43
SGMS1-204ENST00000492601 SPART-AS1P0CW21 52 aa12.35□□□□□ -0.43
SGMS1-204ENST00000492601 ANXA7P20073 488 aaKnown RBP12.35□□□□□ -0.43
SGMS1-204ENST00000492601 SAMD13Q5VXD3 122 aa12.35□□□□□ -0.43
SGMS1-204ENST00000492601 IGFL4Q6B9Z1 124 aa12.35□□□□□ -0.43
SGMS1-204ENST00000492601 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.35□□□□□ -0.43
SGMS1-204ENST00000492601 TMEM144Q7Z5S9 345 aa12.35□□□□□ -0.43
SGMS1-204ENST00000492601 OR4D5Q8NGN0 318 aa12.35□□□□□ -0.43
SGMS1-204ENST00000492601 C7orf50Q9BRJ6 194 aaKnown RBP12.35□□□□□ -0.43
SGMS1-204ENST00000492601 DNAH17Q9UFH2 4485 aa12.35□□□□□ -0.43
SGMS1-204ENST00000492601 TMEM189A5PLL7 270 aa12.34□□□□□ -0.43
SGMS1-204ENST00000492601 ZNF701M0R085 212 aaPredicted RBP12.34□□□□□ -0.43
SGMS1-204ENST00000492601 CCNKO75909 580 aa12.34□□□□□ -0.43
SGMS1-204ENST00000492601 IL5P05113 134 aa12.34□□□□□ -0.43
SGMS1-204ENST00000492601 FGL1Q08830 312 aa12.34□□□□□ -0.43
SGMS1-204ENST00000492601 C4orf46Q504U0 113 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms