RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.19■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 FAM231DQ6ZW35 169 aa17.19■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 KRTAP27-1Q3LI81 207 aa17.19■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 SLC25A15Q9Y619 301 aa17.19■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 STPG4Q8N801 248 aa17.19■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 K7EN84 100 aa17.18■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 FER1L5A0AVI2 2057 aa17.18■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 ZCCHC24Q8N2G6 241 aaKnown RBP17.18■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 ARPC1AQ92747 370 aa17.18■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 GAFA1Q96PS6 74 aa17.18■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 NAA38Q9BRA0 125 aaKnown RBP17.18■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 FGF23Q9GZV9 251 aaPredicted RBP17.18■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 PMS2P5A8MQ11 134 aa17.18■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 F2Z2F3 143 aa17.18■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 OBSL1O75147 1896 aa17.17■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 KIF26AQ9ULI4 1882 aaPredicted RBP17.17■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 IGHV3OR16-13A0A075B7E8 117 aa17.17■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 IGHV3-74A0A0B4J1X5 117 aa17.17■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 LY6G6EA0A0G2JKS1 128 aa17.17■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 EEF1AKMT3Q96AZ1 226 aa17.17■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 U3KQA8 63 aa17.17■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 NBR2O15453 112 aa17.17■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 IGKCP01834 107 aa17.17■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 COX6CP09669 75 aa17.17■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 IGLL1P15814 213 aa17.17■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 NDUFA3O95167 84 aa17.17■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 MCRIP2Q9BUT9 160 aaKnown RBP17.17■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 TMEM200BQ69YZ2 307 aa17.17■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 RCHY1Q96PM5 261 aa17.17■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 ASCL2Q99929 193 aa17.17■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 DOCK8Q8NF50 2099 aa17.17■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 NUPR1O60356 82 aa17.16■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 DKK1O94907 266 aa17.16■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 TNFRSF14Q92956 283 aa17.16■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 TRAV8-1A0A0A6YYK1 113 aa17.16■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 PRDM6Q9NQX0 595 aa17.16■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 KIR2DL4Q99706 377 aa17.16■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 SIGMAR1Q99720 223 aa17.16■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 ZNF492Q9P255 531 aa17.16■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 IGHV2-26A0A0B4J1V2 119 aa17.16■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 CCL21O00585 134 aa17.16■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 CT83Q5H943 113 aa17.16■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 FAM57AQ8TBR7 257 aa17.16■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 RAXQ9Y2V3 346 aa17.16■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 ATP5G2Q06055 141 aa17.15■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 LYZL1Q6UWQ5 148 aa17.15■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 CST9LQ9H4G1 147 aa17.15■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 M0R381 172 aa17.15■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 C15orf65H3BRN8 121 aa17.15■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 OCIAD2Q56VL3 154 aa17.15■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 SMPXQ9UHP9 88 aa17.15■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 Q86TA4 180 aa17.15■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 SYT8Q8NBV8 401 aa17.15■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 SLC25A2Q9BXI2 301 aa17.15■□□□□ 0.34
CHKB-CPT1B-203ENST00000492556 PPP1R17O96001 155 aa17.14■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 LINC01559Q495D7 138 aa17.14■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 SPACA3Q8IXA5 215 aa17.14■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 FAM231BA6NCW3 169 aa17.14■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 ZNF418Q8TF45 676 aaPredicted RBP17.14■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 IGHV3OR16-8A0A075B7F1 116 aa17.14■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 INTS1Q8N201 2190 aaKnown RBP17.14■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 PRR20EP86478 221 aa17.13■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 PRR20CP86479 221 aa17.13■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 PRR20DP86480 221 aa17.13■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 PRR20BP86481 221 aa17.13■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 PRR20AP86496 221 aa17.13■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 PRB3Q04118 309 aaPredicted RBP17.13■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 KIR3DS1Q14943 382 aa17.13■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 ZNF479Q96JC4 524 aa17.13■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 UBTD1Q9HAC8 227 aa17.13■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 IGHV3-66A0A0C4DH42 116 aa17.13■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 Q6ZR03 302 aa17.13■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 BCL6BQ8N143 479 aaPredicted RBP17.13■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 TMPRSS3P57727 454 aa17.13■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 DOCK7Q96N67 2140 aa17.13■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 HTN1P15515 57 aa17.13■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 ASIPP42127 132 aa17.12■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 ZNF407Q9C0G0 2248 aa17.12■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 SRSF1Q07955 248 aaKnown RBP eCLIP17.12■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 IGHV3-49A0A0A0MS15 119 aa17.11■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 NPIPB5A8MRT5 1133 aa17.11■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 NCR2O95944 276 aa17.11■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 PRB4P10163 310 aaPredicted RBP17.11■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 EVI2AP22794 236 aa17.11■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 TMEM170BQ5T4T1 132 aa17.11■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 DTX1Q86Y01 620 aa17.11■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 NDUFA4L2Q9NRX3 87 aa17.11■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 SELENOKQ9Y6D0 94 aa17.11■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 PSG3Q16557 428 aa17.11■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 COLQQ9Y215 455 aaPredicted RBP17.11■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 IGHV1-8P0DP01 117 aa17.11■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 LYPD1Q8N2G4 141 aa17.11■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 SLC50A1Q9BRV3 221 aa17.11■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 PRSS2P07478 247 aa17.1■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 NCOR1P1Q9H4R4 102 aa17.1■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 RNFT1Q5M7Z0 435 aa17.1■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 ESDP10768 282 aa17.1■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 ZNF256Q9Y2P7 627 aaPredicted RBP17.1■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 HEATR1Q9H583 2144 aaKnown RBP17.1■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 APOMO95445 188 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms