RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 NIT1Q86X76 327 aa10.25□□□□□ -0.77
HDAC3-213ENST00000492506 MRPL30Q8TCC3 161 aaKnown RBP10.25□□□□□ -0.77
HDAC3-213ENST00000492506 VN1R17PQ8TDU5 208 aa10.25□□□□□ -0.77
HDAC3-213ENST00000492506 PP6455Q8WZ26 134 aa10.25□□□□□ -0.77
HDAC3-213ENST00000492506 PARLQ9H300 379 aa10.25□□□□□ -0.77
HDAC3-213ENST00000492506 BANF2Q9H503 90 aa10.25□□□□□ -0.77
HDAC3-213ENST00000492506 ZNF430Q9H8G1 570 aaPredicted RBP10.25□□□□□ -0.77
HDAC3-213ENST00000492506 SLC39A9Q9NUM3 307 aa10.25□□□□□ -0.77
HDAC3-213ENST00000492506 C3orf85A0A1B0GTC6 90 aa10.24□□□□□ -0.77
HDAC3-213ENST00000492506 IGLC7A0M8Q6 106 aa10.24□□□□□ -0.77
HDAC3-213ENST00000492506 DEGS1O15121 323 aa10.24□□□□□ -0.77
HDAC3-213ENST00000492506 SSSCA1O60232 199 aa10.24□□□□□ -0.77
HDAC3-213ENST00000492506 RHOBP62745 196 aa10.24□□□□□ -0.77
HDAC3-213ENST00000492506 KIR2DS1Q14954 304 aa10.24□□□□□ -0.77
HDAC3-213ENST00000492506 SRSF7Q16629 238 aaKnown RBP eCLIP10.24□□□□□ -0.77
HDAC3-213ENST00000492506 C16orf54Q6UWD8 224 aa10.24□□□□□ -0.77
HDAC3-213ENST00000492506 NECAP1Q8NC96 275 aa10.24□□□□□ -0.77
HDAC3-213ENST00000492506 RPRMQ9NS64 109 aa10.24□□□□□ -0.77
HDAC3-213ENST00000492506 ZNF256Q9Y2P7 627 aaPredicted RBP10.24□□□□□ -0.77
HDAC3-213ENST00000492506 TRGV10A0A0A0MS01 117 aa10.23□□□□□ -0.77
HDAC3-213ENST00000492506 A0A1W2PPI3 338 aa10.23□□□□□ -0.77
HDAC3-213ENST00000492506 BCL3P20749 454 aa10.23□□□□□ -0.77
HDAC3-213ENST00000492506 FUT6P51993 359 aa10.23□□□□□ -0.77
HDAC3-213ENST00000492506 PRRX1P54821 245 aa10.23□□□□□ -0.77
HDAC3-213ENST00000492506 SLC35B1P78383 322 aa10.23□□□□□ -0.77
HDAC3-213ENST00000492506 AESQ08117 197 aa10.23□□□□□ -0.77
HDAC3-213ENST00000492506 DIAPH2-AS1Q14236 149 aa10.23□□□□□ -0.77
HDAC3-213ENST00000492506 C17orf58Q2M2W7 97 aa10.23□□□□□ -0.77
HDAC3-213ENST00000492506 FAM162BQ5T6X4 162 aa10.23□□□□□ -0.77
HDAC3-213ENST00000492506 FAM78BQ5VT40 261 aa10.23□□□□□ -0.77
HDAC3-213ENST00000492506 CFAP161Q6P656 301 aa10.23□□□□□ -0.77
HDAC3-213ENST00000492506 LCNL1Q6ZST4 164 aa10.23□□□□□ -0.77
HDAC3-213ENST00000492506 BAGE3Q86Y29 109 aa10.23□□□□□ -0.77
HDAC3-213ENST00000492506 BAGE2Q86Y30 109 aa10.23□□□□□ -0.77
HDAC3-213ENST00000492506 Q8IYB0 196 aa10.23□□□□□ -0.77
HDAC3-213ENST00000492506 FAM58AQ8N1B3 248 aa10.23□□□□□ -0.77
HDAC3-213ENST00000492506 TMEM256Q8N2U0 113 aa10.23□□□□□ -0.77
HDAC3-213ENST00000492506 DRAM1Q8N682 238 aa10.23□□□□□ -0.77
HDAC3-213ENST00000492506 RNF152Q8N8N0 203 aa10.23□□□□□ -0.77
HDAC3-213ENST00000492506 OR4S2Q8NH73 311 aa10.23□□□□□ -0.77
HDAC3-213ENST00000492506 PLEKHJ1Q9NW61 149 aa10.23□□□□□ -0.77
HDAC3-213ENST00000492506 SMAD5-AS1Q9Y6J3 95 aa10.23□□□□□ -0.77
HDAC3-213ENST00000492506 PLECQ15149 4684 aaKnown RBP10.23□□□□□ -0.77
HDAC3-213ENST00000492506 MPPED1O15442 326 aa10.22□□□□□ -0.77
HDAC3-213ENST00000492506 FHL3Q13643 280 aa10.22□□□□□ -0.77
HDAC3-213ENST00000492506 LCN15Q6UWW0 184 aa10.22□□□□□ -0.77
HDAC3-213ENST00000492506 Q6ZS49 121 aa10.22□□□□□ -0.77
HDAC3-213ENST00000492506 MTURNQ8N3F0 131 aa10.22□□□□□ -0.77
HDAC3-213ENST00000492506 OR5D18Q8NGL1 313 aa10.22□□□□□ -0.77
HDAC3-213ENST00000492506 COQ2Q96H96 371 aa10.22□□□□□ -0.77
HDAC3-213ENST00000492506 LY96Q9Y6Y9 160 aa10.22□□□□□ -0.77
HDAC3-213ENST00000492506 ODAMA1E959 279 aa10.21□□□□□ -0.77
HDAC3-213ENST00000492506 S1PR2O95136 353 aa10.21□□□□□ -0.77
HDAC3-213ENST00000492506 OR2H2O95918 312 aa10.21□□□□□ -0.77
HDAC3-213ENST00000492506 GPX1P07203 203 aa10.21□□□□□ -0.77
HDAC3-213ENST00000492506 SMIM17P0DL12 118 aa10.21□□□□□ -0.77
HDAC3-213ENST00000492506 CGB3P0DN86 165 aa10.21□□□□□ -0.77
HDAC3-213ENST00000492506 CGB7P0DN87 165 aa10.21□□□□□ -0.77
HDAC3-213ENST00000492506 ADMP35318 185 aa10.21□□□□□ -0.77
HDAC3-213ENST00000492506 FGF8P55075 233 aaPredicted RBP10.21□□□□□ -0.77
HDAC3-213ENST00000492506 NMSQ5H8A3 153 aa10.21□□□□□ -0.77
HDAC3-213ENST00000492506 OR9G1Q8NH87 305 aa10.21□□□□□ -0.77
HDAC3-213ENST00000492506 RPEQ96AT9 228 aa10.21□□□□□ -0.77
HDAC3-213ENST00000492506 KCNS1Q96KK3 526 aa10.21□□□□□ -0.77
HDAC3-213ENST00000492506 Q96M66 194 aa10.21□□□□□ -0.77
HDAC3-213ENST00000492506 IGKV1-9A0A0C4DH69 117 aa10.2□□□□□ -0.78
HDAC3-213ENST00000492506 CORTO00230 105 aa10.2□□□□□ -0.78
HDAC3-213ENST00000492506 SERF1AO75920 110 aa10.2□□□□□ -0.78
HDAC3-213ENST00000492506 RUNX1Q01196 453 aa10.2□□□□□ -0.78
HDAC3-213ENST00000492506 CFHR3Q02985 330 aa10.2□□□□□ -0.78
HDAC3-213ENST00000492506 HES1Q14469 280 aa10.2□□□□□ -0.78
HDAC3-213ENST00000492506 ZFAND6Q6FIF0 208 aa10.2□□□□□ -0.78
HDAC3-213ENST00000492506 MRPL54Q6P161 138 aaKnown RBP10.2□□□□□ -0.78
HDAC3-213ENST00000492506 GTF2H5Q6ZYL4 71 aa10.2□□□□□ -0.78
HDAC3-213ENST00000492506 SELENOHQ8IZQ5 122 aaKnown RBP10.2□□□□□ -0.78
HDAC3-213ENST00000492506 OR52L2PQ8NGH6 319 aa10.2□□□□□ -0.78
HDAC3-213ENST00000492506 BORCS7Q96B45 105 aa10.2□□□□□ -0.78
HDAC3-213ENST00000492506 BORCS8Q96FH0 119 aa10.2□□□□□ -0.78
HDAC3-213ENST00000492506 GNB1LQ9BYB4 327 aa10.2□□□□□ -0.78
HDAC3-213ENST00000492506 KCNIP2Q9NS61 270 aa10.2□□□□□ -0.78
HDAC3-213ENST00000492506 PEF1Q9UBV8 284 aaKnown RBP10.2□□□□□ -0.78
HDAC3-213ENST00000492506 SMPXQ9UHP9 88 aa10.2□□□□□ -0.78
HDAC3-213ENST00000492506 TRAV9-2A0A087WT02 112 aa10.19□□□□□ -0.78
HDAC3-213ENST00000492506 IGKV1-12A0A0C4DH73 117 aa10.19□□□□□ -0.78
HDAC3-213ENST00000492506 FAM90A26D6RGX4 464 aa10.19□□□□□ -0.78
HDAC3-213ENST00000492506 H0Y980 276 aa10.19□□□□□ -0.78
HDAC3-213ENST00000492506 SH2D1BO14796 132 aa10.19□□□□□ -0.78
HDAC3-213ENST00000492506 IGKV1D-33P01593 117 aa10.19□□□□□ -0.78
HDAC3-213ENST00000492506 IGKV1-33P01594 117 aa10.19□□□□□ -0.78
HDAC3-213ENST00000492506 IGKV1D-12P01611 117 aa10.19□□□□□ -0.78
HDAC3-213ENST00000492506 HLA-DRB1P01911 266 aa10.19□□□□□ -0.78
HDAC3-213ENST00000492506 GPR12P47775 334 aa10.19□□□□□ -0.78
HDAC3-213ENST00000492506 FOXE3Q13461 319 aa10.19□□□□□ -0.78
HDAC3-213ENST00000492506 EBI3Q14213 229 aa10.19□□□□□ -0.78
HDAC3-213ENST00000492506 KISS1Q15726 138 aa10.19□□□□□ -0.78
HDAC3-213ENST00000492506 SP6Q3SY56 376 aa10.19□□□□□ -0.78
HDAC3-213ENST00000492506 Q6P435 159 aa10.19□□□□□ -0.78
HDAC3-213ENST00000492506 UNQ5815/PRO19632Q6UWF5 114 aa10.19□□□□□ -0.78
HDAC3-213ENST00000492506 ASCL4Q6XD76 172 aa10.19□□□□□ -0.78
HDAC3-213ENST00000492506 Q8N976 141 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms