RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 SFXN4Q6P4A7 337 aa6.81□□□□□ -1.32
HDAC3-212ENST00000492407 TMEM217Q8N7C4 229 aa6.81□□□□□ -1.32
HDAC3-212ENST00000492407 OR5AP2Q8NGF4 316 aa6.81□□□□□ -1.32
HDAC3-212ENST00000492407 LINC00476Q8WZB0 136 aa6.81□□□□□ -1.32
HDAC3-212ENST00000492407 QTRT1Q9BXR0 403 aaKnown RBP6.81□□□□□ -1.32
HDAC3-212ENST00000492407 WFDC10AQ9H1F0 79 aa6.81□□□□□ -1.32
HDAC3-212ENST00000492407 CCL28Q9NRJ3 127 aa6.81□□□□□ -1.32
HDAC3-212ENST00000492407 COMMD9Q9P000 198 aa6.81□□□□□ -1.32
HDAC3-212ENST00000492407 TNCP24821 2201 aa6.81□□□□□ -1.32
HDAC3-212ENST00000492407 TRAV30A0A087WSZ9 112 aa6.8□□□□□ -1.32
HDAC3-212ENST00000492407 SMCO3A2RU48 225 aa6.8□□□□□ -1.32
HDAC3-212ENST00000492407 NDUFA4O00483 81 aa6.8□□□□□ -1.32
HDAC3-212ENST00000492407 SPRY2O43597 315 aa6.8□□□□□ -1.32
HDAC3-212ENST00000492407 IGHV3-23P01764 117 aa6.8□□□□□ -1.32
HDAC3-212ENST00000492407 SERPINE2P07093 398 aa6.8□□□□□ -1.32
HDAC3-212ENST00000492407 EDN2P20800 178 aa6.8□□□□□ -1.32
HDAC3-212ENST00000492407 RANP62826 216 aaKnown RBP6.8□□□□□ -1.32
HDAC3-212ENST00000492407 ZNF585BQ52M93 769 aa6.8□□□□□ -1.32
HDAC3-212ENST00000492407 DHRS11Q6UWP2 260 aa6.8□□□□□ -1.32
HDAC3-212ENST00000492407 BTNL8Q6UX41 500 aa6.8□□□□□ -1.32
HDAC3-212ENST00000492407 UNQ9165/PRO28630Q6UXU0 137 aa6.8□□□□□ -1.32
HDAC3-212ENST00000492407 NRARPQ7Z6K4 114 aa6.8□□□□□ -1.32
HDAC3-212ENST00000492407 DUSP18Q8NEJ0 188 aa6.8□□□□□ -1.32
HDAC3-212ENST00000492407 THAP6Q8TBB0 222 aa6.8□□□□□ -1.32
HDAC3-212ENST00000492407 RNASEH2CQ8TDP1 164 aaKnown RBP6.8□□□□□ -1.32
HDAC3-212ENST00000492407 SECTM1Q8WVN6 248 aa6.8□□□□□ -1.32
HDAC3-212ENST00000492407 TMEM190Q8WZ59 177 aa6.8□□□□□ -1.32
HDAC3-212ENST00000492407 SLC25A32Q9H2D1 315 aa6.8□□□□□ -1.32
HDAC3-212ENST00000492407 DAZ1Q9NQZ3 744 aaKnown RBP6.8□□□□□ -1.32
HDAC3-212ENST00000492407 TRAV18A0A075B6X5 111 aa6.79□□□□□ -1.32
HDAC3-212ENST00000492407 OR4C46A6NHA9 309 aa6.79□□□□□ -1.32
HDAC3-212ENST00000492407 SLC17A3O00476 420 aa6.79□□□□□ -1.32
HDAC3-212ENST00000492407 TMEM50AO95807 157 aa6.79□□□□□ -1.32
HDAC3-212ENST00000492407 GCGP01275 180 aa6.79□□□□□ -1.32
HDAC3-212ENST00000492407 PSMB9P28065 219 aa6.79□□□□□ -1.32
HDAC3-212ENST00000492407 GPR183P32249 361 aa6.79□□□□□ -1.32
HDAC3-212ENST00000492407 ERVK-16P61578 105 aa6.79□□□□□ -1.32
HDAC3-212ENST00000492407 JOSD1Q15040 202 aaPredicted RBP6.79□□□□□ -1.32
HDAC3-212ENST00000492407 CDPF1Q6NVV7 123 aa6.79□□□□□ -1.32
HDAC3-212ENST00000492407 CEMP1Q6PRD7 247 aaPredicted RBP6.79□□□□□ -1.32
HDAC3-212ENST00000492407 GSG1LQ6UXU4 331 aa6.79□□□□□ -1.32
HDAC3-212ENST00000492407 C19orf35Q6ZS72 473 aa6.79□□□□□ -1.32
HDAC3-212ENST00000492407 STPG3Q8N7X2 389 aa6.79□□□□□ -1.32
HDAC3-212ENST00000492407 OR4D5Q8NGN0 318 aa6.79□□□□□ -1.32
HDAC3-212ENST00000492407 OR1L8Q8NGR8 309 aa6.79□□□□□ -1.32
HDAC3-212ENST00000492407 LGALS14Q8TCE9 139 aa6.79□□□□□ -1.32
HDAC3-212ENST00000492407 ISOC2Q96AB3 205 aa6.79□□□□□ -1.32
HDAC3-212ENST00000492407 RNF183Q96D59 192 aa6.79□□□□□ -1.32
HDAC3-212ENST00000492407 GALNT14Q96FL9 552 aa6.79□□□□□ -1.32
HDAC3-212ENST00000492407 C20orf85Q9H1P6 137 aa6.79□□□□□ -1.32
HDAC3-212ENST00000492407 FKBP11Q9NYL4 201 aa6.79□□□□□ -1.32
HDAC3-212ENST00000492407 KLK5Q9Y337 293 aaPredicted RBP6.79□□□□□ -1.32
HDAC3-212ENST00000492407 TMED3Q9Y3Q3 217 aa6.79□□□□□ -1.32
HDAC3-212ENST00000492407 TEX50A0A1B0GTY4 177 aa6.78□□□□□ -1.32
HDAC3-212ENST00000492407 IGSF23A1L1A6 192 aa6.78□□□□□ -1.32
HDAC3-212ENST00000492407 C15orf62A8K5M9 175 aa6.78□□□□□ -1.32
HDAC3-212ENST00000492407 CCL25O15444 150 aa6.78□□□□□ -1.32
HDAC3-212ENST00000492407 TNFSF12O43508 249 aa6.78□□□□□ -1.32
HDAC3-212ENST00000492407 REG1AP05451 166 aa6.78□□□□□ -1.32
HDAC3-212ENST00000492407 SDC2P34741 201 aa6.78□□□□□ -1.32
HDAC3-212ENST00000492407 RFX2P48378 723 aa6.78□□□□□ -1.32
HDAC3-212ENST00000492407 CKS1BP61024 79 aa6.78□□□□□ -1.32
HDAC3-212ENST00000492407 WT1-ASQ06250 92 aa6.78□□□□□ -1.32
HDAC3-212ENST00000492407 ZNF818PQ6ZRF7 136 aa6.78□□□□□ -1.32
HDAC3-212ENST00000492407 GVQW1Q8N7I0 195 aa6.78□□□□□ -1.32
HDAC3-212ENST00000492407 OR5B3Q8NH48 314 aa6.78□□□□□ -1.32
HDAC3-212ENST00000492407 LSM10Q969L4 123 aaKnown RBP6.78□□□□□ -1.32
HDAC3-212ENST00000492407 SLC25A38Q96DW6 304 aa6.78□□□□□ -1.32
HDAC3-212ENST00000492407 NDUFA4L2Q9NRX3 87 aa6.78□□□□□ -1.32
HDAC3-212ENST00000492407 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.78□□□□□ -1.32
HDAC3-212ENST00000492407 C21orf62Q9NYP8 219 aa6.78□□□□□ -1.32
HDAC3-212ENST00000492407 PRNDQ9UKY0 176 aa6.78□□□□□ -1.32
HDAC3-212ENST00000492407 F11RQ9Y624 299 aaKnown RBP6.78□□□□□ -1.32
HDAC3-212ENST00000492407 S4R3C0 116 aa6.78□□□□□ -1.32
HDAC3-212ENST00000492407 ALMS1Q8TCU4 4167 aa6.77□□□□□ -1.33
HDAC3-212ENST00000492407 TRAV3A0A0B4J244 114 aa6.77□□□□□ -1.33
HDAC3-212ENST00000492407 M0QXV9 152 aa6.77□□□□□ -1.33
HDAC3-212ENST00000492407 XRCC3O43542 346 aa6.77□□□□□ -1.33
HDAC3-212ENST00000492407 PDE6DO43924 150 aa6.77□□□□□ -1.33
HDAC3-212ENST00000492407 PGLYRP1O75594 196 aaPredicted RBP6.77□□□□□ -1.33
HDAC3-212ENST00000492407 MPC2O95563 127 aa6.77□□□□□ -1.33
HDAC3-212ENST00000492407 SNRPCP09234 159 aaKnown RBP6.77□□□□□ -1.33
HDAC3-212ENST00000492407 OR13C7P0DN81 318 aa6.77□□□□□ -1.33
HDAC3-212ENST00000492407 FCGR2BP31994 310 aaPredicted RBP6.77□□□□□ -1.33
HDAC3-212ENST00000492407 RAP2BP61225 183 aa6.77□□□□□ -1.33
HDAC3-212ENST00000492407 HERV-K104P61576 105 aa6.77□□□□□ -1.33
HDAC3-212ENST00000492407 NCS1P62166 190 aa6.77□□□□□ -1.33
HDAC3-212ENST00000492407 IDNKQ5T6J7 187 aa6.77□□□□□ -1.33
HDAC3-212ENST00000492407 AADACL3Q5VUY0 350 aa6.77□□□□□ -1.33
HDAC3-212ENST00000492407 SNX29P2Q8IUI4 249 aa6.77□□□□□ -1.33
HDAC3-212ENST00000492407 CMTM1Q8IZ96 169 aa6.77□□□□□ -1.33
HDAC3-212ENST00000492407 SAMD12Q8N8I0 201 aa6.77□□□□□ -1.33
HDAC3-212ENST00000492407 OR1P1Q8NH06 330 aa6.77□□□□□ -1.33
HDAC3-212ENST00000492407 GATAD1Q8WUU5 269 aa6.77□□□□□ -1.33
HDAC3-212ENST00000492407 S100A16Q96FQ6 103 aaKnown RBP6.77□□□□□ -1.33
HDAC3-212ENST00000492407 C20orf24Q9BUV8 137 aa6.77□□□□□ -1.33
HDAC3-212ENST00000492407 CST9LQ9H4G1 147 aa6.77□□□□□ -1.33
HDAC3-212ENST00000492407 MAP6D1Q9H9H5 199 aa6.77□□□□□ -1.33
HDAC3-212ENST00000492407 ANAPC10Q9UM13 185 aa6.77□□□□□ -1.33
HDAC3-212ENST00000492407 A0A0J9YWU9 116 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms