RNA–Protein interactions for RNA: ENST00000492357.1

USP54-214, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 353 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-214ENST00000492357 HSPB1P04792 205 aaKnown RBP7.45□□□□□ -1.22
USP54-214ENST00000492357 IL4P05112 153 aa7.45□□□□□ -1.22
USP54-214ENST00000492357 RPLP1P05386 114 aaKnown RBP7.45□□□□□ -1.22
USP54-214ENST00000492357 UQCC3Q6UW78 93 aa7.45□□□□□ -1.22
USP54-214ENST00000492357 REC114Q7Z4M0 266 aa7.45□□□□□ -1.22
USP54-214ENST00000492357 SFT2D1Q8WV19 159 aa7.45□□□□□ -1.22
USP54-214ENST00000492357 TMEM37Q8WXS4 190 aa7.45□□□□□ -1.22
USP54-214ENST00000492357 MARC2Q969Z3 335 aa7.45□□□□□ -1.22
USP54-214ENST00000492357 TCEAL7Q9BRU2 100 aa7.45□□□□□ -1.22
USP54-214ENST00000492357 SHANK2-AS3Q9BTD1 123 aa7.45□□□□□ -1.22
USP54-214ENST00000492357 TMEM231Q9H6L2 316 aa7.45□□□□□ -1.22
USP54-214ENST00000492357 MANBALQ9NQG1 85 aa7.45□□□□□ -1.22
USP54-214ENST00000492357 RABAC1Q9UI14 185 aa7.45□□□□□ -1.22
USP54-214ENST00000492357 PUS1Q9Y606 427 aaKnown RBP eCLIP7.45□□□□□ -1.22
USP54-214ENST00000492357 A0A1W2PS18 150 aa7.44□□□□□ -1.22
USP54-214ENST00000492357 CYSRT1A8MQ03 144 aa7.44□□□□□ -1.22
USP54-214ENST00000492357 H3BRN7 92 aa7.44□□□□□ -1.22
USP54-214ENST00000492357 RPL7P18124 248 aaKnown RBP7.44□□□□□ -1.22
USP54-214ENST00000492357 CRYBB3P26998 211 aa7.44□□□□□ -1.22
USP54-214ENST00000492357 GUK1Q16774 197 aa7.44□□□□□ -1.22
USP54-214ENST00000492357 SAMD13Q5VXD3 122 aa7.44□□□□□ -1.22
USP54-214ENST00000492357 FAM122CQ6P4D5 195 aa7.44□□□□□ -1.22
USP54-214ENST00000492357 TOMM20LQ6UXN7 152 aa7.44□□□□□ -1.22
USP54-214ENST00000492357 PATE2Q6UY27 113 aa7.44□□□□□ -1.22
USP54-214ENST00000492357 LINC00305Q7Z4B0 112 aa7.44□□□□□ -1.22
USP54-214ENST00000492357 BPIFA4PQ86YQ2 179 aa7.44□□□□□ -1.22
USP54-214ENST00000492357 GRAMD2BQ96HH9 432 aa7.44□□□□□ -1.22
USP54-214ENST00000492357 METTL26Q96S19 204 aa7.44□□□□□ -1.22
USP54-214ENST00000492357 ELOVL1Q9BW60 279 aa7.44□□□□□ -1.22
USP54-214ENST00000492357 VSIRQ9H7M9 311 aa7.44□□□□□ -1.22
USP54-214ENST00000492357 SEPSECSQ9HD40 501 aaKnown RBP7.44□□□□□ -1.22
USP54-214ENST00000492357 UFC1Q9Y3C8 167 aa7.44□□□□□ -1.22
USP54-214ENST00000492357 ZNF253O75346 499 aa7.43□□□□□ -1.22
USP54-214ENST00000492357 ATP6V1G1O75348 118 aa7.43□□□□□ -1.22
USP54-214ENST00000492357 ORM2P19652 201 aa7.43□□□□□ -1.22
USP54-214ENST00000492357 NPPCP23582 126 aa7.43□□□□□ -1.22
USP54-214ENST00000492357 GATA2P23769 480 aaPredicted RBP7.43□□□□□ -1.22
USP54-214ENST00000492357 FHITP49789 147 aa7.43□□□□□ -1.22
USP54-214ENST00000492357 LYZP61626 148 aa7.43□□□□□ -1.22
USP54-214ENST00000492357 FHL3Q13643 280 aa7.43□□□□□ -1.22
USP54-214ENST00000492357 PDE6HQ13956 83 aa7.43□□□□□ -1.22
USP54-214ENST00000492357 ZNF726P1Q15940 193 aa7.43□□□□□ -1.22
USP54-214ENST00000492357 RPEL1Q2QD12 228 aa7.43□□□□□ -1.22
USP54-214ENST00000492357 C1QL4Q86Z23 238 aa7.43□□□□□ -1.22
USP54-214ENST00000492357 ARL6IP6Q8N6S5 226 aa7.43□□□□□ -1.22
USP54-214ENST00000492357 OR1B1Q8NGR6 318 aa7.43□□□□□ -1.22
USP54-214ENST00000492357 FAM210AQ96ND0 272 aa7.43□□□□□ -1.22
USP54-214ENST00000492357 SLC25A39Q9BZJ4 359 aaPredicted RBP7.43□□□□□ -1.22
USP54-214ENST00000492357 SLC25A22Q9H936 323 aa7.43□□□□□ -1.22
USP54-214ENST00000492357 DAZ1Q9NQZ3 744 aaKnown RBP7.43□□□□□ -1.22
USP54-214ENST00000492357 CLEC5AQ9NY25 188 aa7.43□□□□□ -1.22
USP54-214ENST00000492357 U3KQE9 123 aa7.43□□□□□ -1.22
USP54-214ENST00000492357 MAST4O15021 2626 aa7.42□□□□□ -1.22
USP54-214ENST00000492357 A0A1W2PRE2 83 aa7.42□□□□□ -1.22
USP54-214ENST00000492357 ZNF98A6NK75 572 aa7.42□□□□□ -1.22
USP54-214ENST00000492357 LINC01619G3V211 115 aa7.42□□□□□ -1.22
USP54-214ENST00000492357 BUB3O43684 328 aa7.42□□□□□ -1.22
USP54-214ENST00000492357 USF2Q15853 346 aaPredicted RBP7.42□□□□□ -1.22
USP54-214ENST00000492357 GCSAMLQ5JQS6 135 aa7.42□□□□□ -1.22
USP54-214ENST00000492357 TCTEX1D4Q5JR98 221 aa7.42□□□□□ -1.22
USP54-214ENST00000492357 NDUFA11Q86Y39 141 aa7.42□□□□□ -1.22
USP54-214ENST00000492357 SLC7A5P1Q8MH63 180 aa7.42□□□□□ -1.22
USP54-214ENST00000492357 LYPD1Q8N2G4 141 aa7.42□□□□□ -1.22
USP54-214ENST00000492357 FAM167A-AS1Q96KT0 104 aa7.42□□□□□ -1.22
USP54-214ENST00000492357 HRH4Q9H3N8 390 aa7.42□□□□□ -1.22
USP54-214ENST00000492357 GNB4Q9HAV0 340 aa7.42□□□□□ -1.22
USP54-214ENST00000492357 PEMTQ9UBM1 199 aa7.42□□□□□ -1.22
USP54-214ENST00000492357 ANK3Q12955 4377 aaKnown RBP7.42□□□□□ -1.22
USP54-214ENST00000492357 HELTA6NFD8 242 aa7.41□□□□□ -1.22
USP54-214ENST00000492357 IGHV3-11P01762 117 aa7.41□□□□□ -1.22
USP54-214ENST00000492357 ARL14EPLP0DKL9 152 aa7.41□□□□□ -1.22
USP54-214ENST00000492357 HIST1H1EP10412 219 aaKnown RBP7.41□□□□□ -1.22
USP54-214ENST00000492357 S100A1P23297 94 aa7.41□□□□□ -1.22
USP54-214ENST00000492357 GCHFRP30047 84 aa7.41□□□□□ -1.22
USP54-214ENST00000492357 KLF5Q13887 457 aaPredicted RBP7.41□□□□□ -1.22
USP54-214ENST00000492357 C10orf99Q6UWK7 81 aa7.41□□□□□ -1.22
USP54-214ENST00000492357 LCN15Q6UWW0 184 aa7.41□□□□□ -1.22
USP54-214ENST00000492357 MIR17HGQ75NE6 70 aa7.41□□□□□ -1.22
USP54-214ENST00000492357 OR4F17Q8NGA8 305 aa7.41□□□□□ -1.22
USP54-214ENST00000492357 DPF1Q92782 380 aa7.41□□□□□ -1.22
USP54-214ENST00000492357 ZNF414Q96IQ9 312 aa7.41□□□□□ -1.22
USP54-214ENST00000492357 OR4F4Q96R69 305 aa7.41□□□□□ -1.22
USP54-214ENST00000492357 OR51M1Q9H341 326 aa7.41□□□□□ -1.22
USP54-214ENST00000492357 SIGLEC8Q9NYZ4 499 aa7.41□□□□□ -1.22
USP54-214ENST00000492357 RFNGQ9Y644 331 aa7.41□□□□□ -1.22
USP54-214ENST00000492357 S4R3C0 116 aa7.41□□□□□ -1.22
USP54-214ENST00000492357 SVEP1Q4LDE5 3571 aa7.41□□□□□ -1.22
USP54-214ENST00000492357 A0A087X0K7 114 aa7.4□□□□□ -1.22
USP54-214ENST00000492357 IGHV7-4-1A0A0J9YVY3 117 aa7.4□□□□□ -1.22
USP54-214ENST00000492357 RBFOX3A6NFN3 312 aa7.4□□□□□ -1.22
USP54-214ENST00000492357 PPP5D1E7EU14 171 aa7.4□□□□□ -1.22
USP54-214ENST00000492357 TMEM250H0YL14 139 aa7.4□□□□□ -1.22
USP54-214ENST00000492357 OR7C2O60412 319 aa7.4□□□□□ -1.22
USP54-214ENST00000492357 IGHV3-23P01764 117 aa7.4□□□□□ -1.22
USP54-214ENST00000492357 BCL2P10415 239 aa7.4□□□□□ -1.22
USP54-214ENST00000492357 GP9P14770 177 aa7.4□□□□□ -1.22
USP54-214ENST00000492357 HOXD3P31249 432 aaPredicted RBP7.4□□□□□ -1.22
USP54-214ENST00000492357 MYCNOSP40205 109 aa7.4□□□□□ -1.22
USP54-214ENST00000492357 GALR1P47211 349 aa7.4□□□□□ -1.22
USP54-214ENST00000492357 DEFA5Q01523 94 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms