RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 GIG44P09565 113 aaPredicted RBP18.04■□□□□ 0.48
UPF3A-209ENST00000492270 C4BPBP20851 252 aa18.04■□□□□ 0.48
UPF3A-209ENST00000492270 TAS2R30P59541 319 aa18.04■□□□□ 0.48
UPF3A-209ENST00000492270 BPIFCQ8NFQ6 507 aa18.04■□□□□ 0.48
UPF3A-209ENST00000492270 GATAD1Q8WUU5 269 aa18.04■□□□□ 0.48
UPF3A-209ENST00000492270 C5orf51A6NDU8 294 aa18.03■□□□□ 0.48
UPF3A-209ENST00000492270 CFDP00746 253 aaPredicted RBP18.03■□□□□ 0.48
UPF3A-209ENST00000492270 ORM2P19652 201 aa18.03■□□□□ 0.48
UPF3A-209ENST00000492270 SNRPD3P62318 126 aaKnown RBP18.03■□□□□ 0.48
UPF3A-209ENST00000492270 DLK1P80370 383 aa18.03■□□□□ 0.48
UPF3A-209ENST00000492270 ARL16Q0P5N6 197 aa18.03■□□□□ 0.48
UPF3A-209ENST00000492270 C1orf194Q5T5A4 169 aa18.03■□□□□ 0.48
UPF3A-209ENST00000492270 RARRES2Q99969 163 aa18.03■□□□□ 0.48
UPF3A-209ENST00000492270 FBXL17Q9UF56 701 aa18.03■□□□□ 0.48
UPF3A-209ENST00000492270 LSM5Q9Y4Y9 91 aaKnown RBP18.03■□□□□ 0.48
UPF3A-209ENST00000492270 DEFB1P60022 68 aa18.02■□□□□ 0.48
UPF3A-209ENST00000492270 CYP2G1PQ6ZSU1 146 aa18.02■□□□□ 0.48
UPF3A-209ENST00000492270 OR8I2Q8N0Y5 310 aa18.02■□□□□ 0.48
UPF3A-209ENST00000492270 OR1B1Q8NGR6 318 aa18.02■□□□□ 0.48
UPF3A-209ENST00000492270 OR11H2Q8NH07 326 aa18.02■□□□□ 0.48
UPF3A-209ENST00000492270 SLC25A22Q9H936 323 aa18.02■□□□□ 0.48
UPF3A-209ENST00000492270 LCE6AA0A183 80 aa18.01■□□□□ 0.47
UPF3A-209ENST00000492270 K7EPK0 472 aa18.01■□□□□ 0.47
UPF3A-209ENST00000492270 PMS2P11Q13670 270 aa18.01■□□□□ 0.47
UPF3A-209ENST00000492270 OR10P1Q8NGE3 313 aa18.01■□□□□ 0.47
UPF3A-209ENST00000492270 ENKURQ8TC29 256 aa18.01■□□□□ 0.47
UPF3A-209ENST00000492270 SLC25A32Q9H2D1 315 aa18.01■□□□□ 0.47
UPF3A-209ENST00000492270 SEPSECSQ9HD40 501 aaKnown RBP18.01■□□□□ 0.47
UPF3A-209ENST00000492270 DOK5Q9P104 306 aa18.01■□□□□ 0.47
UPF3A-209ENST00000492270 SACSQ9NZJ4 4579 aa18■□□□□ 0.47
UPF3A-209ENST00000492270 SOCS3O14543 225 aa18■□□□□ 0.47
UPF3A-209ENST00000492270 IL5P05113 134 aa18■□□□□ 0.47
UPF3A-209ENST00000492270 C2orf50Q96LR7 162 aa18■□□□□ 0.47
UPF3A-209ENST00000492270 SLC45A2Q9UMX9 530 aa18■□□□□ 0.47
UPF3A-209ENST00000492270 RYR2Q92736 4967 aa17.99■□□□□ 0.47
UPF3A-209ENST00000492270 ZNF98A6NK75 572 aa17.99■□□□□ 0.47
UPF3A-209ENST00000492270 L7N2F9 121 aa17.99■□□□□ 0.47
UPF3A-209ENST00000492270 SPP1P10451 314 aa17.99■□□□□ 0.47
UPF3A-209ENST00000492270 VAMP2P63027 116 aa17.99■□□□□ 0.47
UPF3A-209ENST00000492270 TMEM147Q9BVK8 224 aa17.99■□□□□ 0.47
UPF3A-209ENST00000492270 C11orf1Q9H5F2 150 aa17.99■□□□□ 0.47
UPF3A-209ENST00000492270 NPVFQ9HCQ7 196 aa17.99■□□□□ 0.47
UPF3A-209ENST00000492270 MGAT4CQ9UBM8 478 aa17.99■□□□□ 0.47
UPF3A-209ENST00000492270 SLC38A11Q08AI6 406 aa17.98■□□□□ 0.47
UPF3A-209ENST00000492270 GDF5OSQ5U4N7 250 aa17.98■□□□□ 0.47
UPF3A-209ENST00000492270 MORN3Q6PF18 240 aaPredicted RBP17.98■□□□□ 0.47
UPF3A-209ENST00000492270 C17orf77Q96MU5 243 aa17.98■□□□□ 0.47
UPF3A-209ENST00000492270 LINC00052Q96N35 136 aa17.98■□□□□ 0.47
UPF3A-209ENST00000492270 SCRT1Q9BWW7 348 aa17.98■□□□□ 0.47
UPF3A-209ENST00000492270 CLEC5AQ9NY25 188 aa17.98■□□□□ 0.47
UPF3A-209ENST00000492270 CXorf65A6NEN9 183 aa17.97■□□□□ 0.47
UPF3A-209ENST00000492270 FNDC10F2Z333 226 aa17.97■□□□□ 0.47
UPF3A-209ENST00000492270 LINC00869P0C866 280 aa17.97■□□□□ 0.47
UPF3A-209ENST00000492270 NRARPQ7Z6K4 114 aa17.97■□□□□ 0.47
UPF3A-209ENST00000492270 H3BMM0 161 aa17.96■□□□□ 0.47
UPF3A-209ENST00000492270 H3BRN7 92 aa17.96■□□□□ 0.47
UPF3A-209ENST00000492270 DEFB4AO15263 64 aa17.96■□□□□ 0.47
UPF3A-209ENST00000492270 PSMB3P49720 205 aa17.96■□□□□ 0.47
UPF3A-209ENST00000492270 BCAP31P51572 246 aa17.96■□□□□ 0.47
UPF3A-209ENST00000492270 S100A10P60903 97 aa17.96■□□□□ 0.47
UPF3A-209ENST00000492270 IL15RAQ13261 267 aa17.96■□□□□ 0.47
UPF3A-209ENST00000492270 FAM24AA6NFZ4 105 aa17.95■□□□□ 0.46
UPF3A-209ENST00000492270 HLA-DRB4P13762 266 aa17.95■□□□□ 0.46
UPF3A-209ENST00000492270 ID1P41134 155 aa17.95■□□□□ 0.46
UPF3A-209ENST00000492270 GALR1P47211 349 aa17.95■□□□□ 0.46
UPF3A-209ENST00000492270 CAV2P51636 162 aa17.95■□□□□ 0.46
UPF3A-209ENST00000492270 RAB32Q13637 225 aa17.95■□□□□ 0.46
UPF3A-209ENST00000492270 TEPPQ6URK8 271 aa17.95■□□□□ 0.46
UPF3A-209ENST00000492270 UHRF2Q96PU4 802 aa17.95■□□□□ 0.46
UPF3A-209ENST00000492270 RSG1Q9BU20 258 aa17.95■□□□□ 0.46
UPF3A-209ENST00000492270 SLC25A39Q9BZJ4 359 aaPredicted RBP17.95■□□□□ 0.46
UPF3A-209ENST00000492270 C11orf68Q9H3H3 251 aaKnown RBP17.95■□□□□ 0.46
UPF3A-209ENST00000492270 BATF3Q9NR55 127 aa17.95■□□□□ 0.46
UPF3A-209ENST00000492270 HIGD1AQ9Y241 93 aa17.95■□□□□ 0.46
UPF3A-209ENST00000492270 HLA-DRB4X5D2U9 266 aa17.95■□□□□ 0.46
UPF3A-209ENST00000492270 CST7O76096 145 aa17.94■□□□□ 0.46
UPF3A-209ENST00000492270 ATF4P18848 351 aaPredicted RBP17.94■□□□□ 0.46
UPF3A-209ENST00000492270 PLP1P60201 277 aa17.94■□□□□ 0.46
UPF3A-209ENST00000492270 SELENOTP62341 195 aa17.94■□□□□ 0.46
UPF3A-209ENST00000492270 TMEM41BQ5BJD5 291 aa17.94■□□□□ 0.46
UPF3A-209ENST00000492270 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.94■□□□□ 0.46
UPF3A-209ENST00000492270 TMEM217Q8N7C4 229 aa17.94■□□□□ 0.46
UPF3A-209ENST00000492270 CSNK1G2-AS1Q8NCQ2 148 aa17.94■□□□□ 0.46
UPF3A-209ENST00000492270 ISLRO14498 428 aa17.93■□□□□ 0.46
UPF3A-209ENST00000492270 HYPMO75409 117 aa17.93■□□□□ 0.46
UPF3A-209ENST00000492270 DEDDO75618 318 aa17.93■□□□□ 0.46
UPF3A-209ENST00000492270 OR5G3P0C626 314 aa17.93■□□□□ 0.46
UPF3A-209ENST00000492270 RAP2BP61225 183 aa17.93■□□□□ 0.46
UPF3A-209ENST00000492270 C20orf173Q96LM9 149 aa17.93■□□□□ 0.46
UPF3A-209ENST00000492270 SHANK2-AS3Q9BTD1 123 aa17.93■□□□□ 0.46
UPF3A-209ENST00000492270 GGACTQ9BVM4 153 aa17.93■□□□□ 0.46
UPF3A-209ENST00000492270 ARL6Q9H0F7 186 aa17.93■□□□□ 0.46
UPF3A-209ENST00000492270 SAV1Q9H4B6 383 aaPredicted RBP17.93■□□□□ 0.46
UPF3A-209ENST00000492270 AGPAT2O15120 278 aa17.92■□□□□ 0.46
UPF3A-209ENST00000492270 SIX6O95475 246 aa17.92■□□□□ 0.46
UPF3A-209ENST00000492270 IGKV3-20P01619 116 aa17.92■□□□□ 0.46
UPF3A-209ENST00000492270 PATE2Q6UY27 113 aa17.92■□□□□ 0.46
UPF3A-209ENST00000492270 Q8NAQ8 132 aa17.92■□□□□ 0.46
UPF3A-209ENST00000492270 C16orf92Q96LL3 132 aa17.92■□□□□ 0.46
UPF3A-209ENST00000492270 MGST2Q99735 147 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms