RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 PPYP01298 95 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 TNFP01375 233 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 IGHV3-9P01782 118 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 GYPAP02724 150 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 FRMD6-AS1P0C7T7 363 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 FAM236CP0DP71 79 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 CTSEP14091 401 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 EVI2AP22794 236 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 NPY1RP25929 384 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 CTRLP40313 264 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 FXYD4P59646 89 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 YPEL3P61236 119 aaPredicted RBP3.67□□□□□ -1.82
RTN4-215ENST00000491592 LMO4P61968 165 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 RPL23P62829 140 aaKnown RBP3.67□□□□□ -1.82
RTN4-215ENST00000491592 MEF2BQ02080 365 aaPredicted RBP3.67□□□□□ -1.82
RTN4-215ENST00000491592 PLCXD2Q0VAA5 305 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 P2RY6Q15077 328 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 KRTAP24-1Q3LI83 254 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 NMSQ5H8A3 153 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 NOTCH2NLQ7Z3S9 236 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 TRPT1Q86TN4 253 aaKnown RBP3.67□□□□□ -1.82
RTN4-215ENST00000491592 ZNF329Q86UD4 541 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 ZNF721Q8TF20 911 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 LSM10Q969L4 123 aaKnown RBP3.67□□□□□ -1.82
RTN4-215ENST00000491592 ZNF524Q96C55 264 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 PLEKHB2Q96CS7 222 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 ZNF501Q96CX3 271 aaPredicted RBP3.67□□□□□ -1.82
RTN4-215ENST00000491592 GPR82Q96P67 336 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 SIGLEC12Q96PQ1 595 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 YPEL2Q96QA6 119 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 TP53RKQ96S44 253 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 VAMP8Q9BV40 100 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 LINC00470Q9BZP3 86 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 RNASE7Q9H1E1 156 aaKnown RBP3.67□□□□□ -1.82
RTN4-215ENST00000491592 LIME1Q9H400 295 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 GNB4Q9HAV0 340 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 DEPPQ9NTK1 212 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 TMEM106BQ9NUM4 274 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 TRAPPC2LQ9UL33 140 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 TRAPPC1Q9Y5R8 145 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 NCOA6Q14686 2063 aaPredicted RBP3.66□□□□□ -1.82
RTN4-215ENST00000491592 IGKV3D-11A0A0A0MRZ8 115 aa3.66□□□□□ -1.82
RTN4-215ENST00000491592 IGKV1D-43A0A0B4J1Z2 117 aa3.66□□□□□ -1.82
RTN4-215ENST00000491592 PMS2P5A8MQ11 134 aa3.66□□□□□ -1.82
RTN4-215ENST00000491592 C12orf77C9JDV5 145 aa3.66□□□□□ -1.82
RTN4-215ENST00000491592 M0R2Z0 102 aa3.66□□□□□ -1.82
RTN4-215ENST00000491592 NRASP01111 189 aa3.66□□□□□ -1.82
RTN4-215ENST00000491592 KRASP01116 189 aa3.66□□□□□ -1.82
RTN4-215ENST00000491592 IGKV3-20P01619 116 aa3.66□□□□□ -1.82
RTN4-215ENST00000491592 ATP5G1P05496 136 aa3.66□□□□□ -1.82
RTN4-215ENST00000491592 LGALS1P09382 135 aaKnown RBP3.66□□□□□ -1.82
RTN4-215ENST00000491592 TDGF1P13385 188 aa3.66□□□□□ -1.82
RTN4-215ENST00000491592 OPRM1P35372 400 aa3.66□□□□□ -1.82
RTN4-215ENST00000491592 TNFAIP6P98066 277 aaPredicted RBP3.66□□□□□ -1.82
RTN4-215ENST00000491592 TMEM267Q0VDI3 215 aaPredicted RBP3.66□□□□□ -1.82
RTN4-215ENST00000491592 Q0VG73 95 aa3.66□□□□□ -1.82
RTN4-215ENST00000491592 RUNX3Q13761 415 aa3.66□□□□□ -1.82
RTN4-215ENST00000491592 MORN2Q502X0 79 aa3.66□□□□□ -1.82
RTN4-215ENST00000491592 SPATA31B1PQ5VZV4 182 aa3.66□□□□□ -1.82
RTN4-215ENST00000491592 LCN15Q6UWW0 184 aa3.66□□□□□ -1.82
RTN4-215ENST00000491592 SLC22A18ASQ8N1D0 253 aa3.66□□□□□ -1.82
RTN4-215ENST00000491592 C11orf42Q8N5U0 333 aa3.66□□□□□ -1.82
RTN4-215ENST00000491592 DEFB125Q8N687 156 aa3.66□□□□□ -1.82
RTN4-215ENST00000491592 ZNF525Q8N782 197 aa3.66□□□□□ -1.82
RTN4-215ENST00000491592 CMTM2Q8TAZ6 248 aa3.66□□□□□ -1.82
RTN4-215ENST00000491592 LRRC29Q8WV35 223 aa3.66□□□□□ -1.82
RTN4-215ENST00000491592 SPTSSAQ969W0 71 aa3.66□□□□□ -1.82
RTN4-215ENST00000491592 SLC35E1Q96K37 410 aa3.66□□□□□ -1.82
RTN4-215ENST00000491592 LRRC61Q9BV99 259 aa3.66□□□□□ -1.82
RTN4-215ENST00000491592 FAM60AQ9NP50 221 aa3.66□□□□□ -1.82
RTN4-215ENST00000491592 TMEM38BQ9NVV0 291 aa3.66□□□□□ -1.82
RTN4-215ENST00000491592 UQCR10Q9UDW1 63 aa3.66□□□□□ -1.82
RTN4-215ENST00000491592 LAMTOR3Q9UHA4 124 aa3.66□□□□□ -1.82
RTN4-215ENST00000491592 ERG28Q9UKR5 140 aa3.66□□□□□ -1.82
RTN4-215ENST00000491592 WASHC3Q9Y3C0 194 aa3.66□□□□□ -1.82
RTN4-215ENST00000491592 RALGAPA1Q6GYQ0 2036 aa3.66□□□□□ -1.82
RTN4-215ENST00000491592 SHANK1Q9Y566 2161 aa3.66□□□□□ -1.82
RTN4-215ENST00000491592 ATG2BQ96BY7 2078 aa3.66□□□□□ -1.82
RTN4-215ENST00000491592 RP1P56715 2156 aa3.65□□□□□ -1.82
RTN4-215ENST00000491592 CHD3Q12873 2000 aaKnown RBP3.65□□□□□ -1.82
RTN4-215ENST00000491592 IGHV3OR16-12A0A075B7B8 117 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 IGLV3-32A0A0A0MS00 114 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 A0A1B0GXF2 115 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 CD300LBA8K4G0 201 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 SMIM1B2RUZ4 78 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 H0Y9J4 135 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.65□□□□□ -1.83
RTN4-215ENST00000491592 RER1O15258 196 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 LINC01565O15544 149 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 SYNGR2O43760 224 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 NDUFS5O43920 106 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 MDKP21741 143 aaPredicted RBP3.65□□□□□ -1.83
RTN4-215ENST00000491592 PRTN3P24158 256 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 IL3RAP26951 378 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 DEFB103AP81534 67 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 MSMO1Q15800 293 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 C10orf128Q5T292 105 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 TSPO2Q5TGU0 170 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 CLEC19AQ6UXS0 136 aa3.65□□□□□ -1.83
RTN4-215ENST00000491592 LINC01551Q86U37 167 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms