RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 DEFB131BA0A096LNP1 70 aa6.36□□□□□ -1.39
HDAC3-211ENST00000491581 CCDC160A6NGH7 325 aa6.36□□□□□ -1.39
HDAC3-211ENST00000491581 SFT2D2O95562 160 aa6.36□□□□□ -1.39
HDAC3-211ENST00000491581 HTN3P15516 51 aa6.36□□□□□ -1.39
HDAC3-211ENST00000491581 POLR2GP62487 172 aaKnown RBP eCLIP6.36□□□□□ -1.39
HDAC3-211ENST00000491581 SPANXN5Q5MJ07 72 aa6.36□□□□□ -1.39
HDAC3-211ENST00000491581 FAM78BQ5VT40 261 aa6.36□□□□□ -1.39
HDAC3-211ENST00000491581 GGNBP1Q5YKI7 109 aa6.36□□□□□ -1.39
HDAC3-211ENST00000491581 ETFRF1Q6IPR1 90 aa6.36□□□□□ -1.39
HDAC3-211ENST00000491581 TOMM5Q8N4H5 51 aa6.36□□□□□ -1.39
HDAC3-211ENST00000491581 SLC35E1Q96K37 410 aa6.36□□□□□ -1.39
HDAC3-211ENST00000491581 SDHCQ99643 169 aaPredicted RBP6.36□□□□□ -1.39
HDAC3-211ENST00000491581 RBM38Q9H0Z9 239 aaKnown RBP6.36□□□□□ -1.39
HDAC3-211ENST00000491581 SAV1Q9H4B6 383 aaPredicted RBP6.36□□□□□ -1.39
HDAC3-211ENST00000491581 U3KQ87 197 aa6.36□□□□□ -1.39
HDAC3-211ENST00000491581 HERC2O95714 4834 aa6.36□□□□□ -1.39
HDAC3-211ENST00000491581 HECTD4Q9Y4D8 3996 aa6.35□□□□□ -1.39
HDAC3-211ENST00000491581 IGLV2-18A0A075B6J9 118 aa6.35□□□□□ -1.39
HDAC3-211ENST00000491581 TRAV8-2A0A0B4J237 113 aa6.35□□□□□ -1.39
HDAC3-211ENST00000491581 TRAV10A0A0B4J240 114 aa6.35□□□□□ -1.39
HDAC3-211ENST00000491581 ZNF705FA8MVS1 300 aaPredicted RBP6.35□□□□□ -1.39
HDAC3-211ENST00000491581 ORM2P19652 201 aa6.35□□□□□ -1.39
HDAC3-211ENST00000491581 RRAS2P62070 204 aaPredicted RBP6.35□□□□□ -1.39
HDAC3-211ENST00000491581 SNRPD3P62318 126 aaKnown RBP6.35□□□□□ -1.39
HDAC3-211ENST00000491581 FCN2Q15485 313 aa6.35□□□□□ -1.39
HDAC3-211ENST00000491581 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.35□□□□□ -1.39
HDAC3-211ENST00000491581 ZNF705AQ6ZN79 300 aaPredicted RBP6.35□□□□□ -1.39
HDAC3-211ENST00000491581 CCDC190Q86UF4 302 aa6.35□□□□□ -1.39
HDAC3-211ENST00000491581 THAP8Q8NA92 274 aa6.35□□□□□ -1.39
HDAC3-211ENST00000491581 PPP1R14BQ96C90 147 aa6.35□□□□□ -1.39
HDAC3-211ENST00000491581 UHRF2Q96PU4 802 aa6.35□□□□□ -1.39
HDAC3-211ENST00000491581 HRH4Q9H3N8 390 aa6.35□□□□□ -1.39
HDAC3-211ENST00000491581 KIAA1109Q2LD37 5005 aa6.35□□□□□ -1.39
HDAC3-211ENST00000491581 NACAE9PAV3 2078 aa6.35□□□□□ -1.39
HDAC3-211ENST00000491581 PMS2P5A8MQ11 134 aa6.34□□□□□ -1.39
HDAC3-211ENST00000491581 H3BTX0 84 aa6.34□□□□□ -1.39
HDAC3-211ENST00000491581 M0R2Z0 102 aa6.34□□□□□ -1.39
HDAC3-211ENST00000491581 SYNGR2O43760 224 aa6.34□□□□□ -1.39
HDAC3-211ENST00000491581 SCGB2A1O75556 95 aa6.34□□□□□ -1.39
HDAC3-211ENST00000491581 ANXA7P20073 488 aaKnown RBP6.34□□□□□ -1.39
HDAC3-211ENST00000491581 BTCP35070 178 aa6.34□□□□□ -1.39
HDAC3-211ENST00000491581 GPX4P36969 197 aaPredicted RBP6.34□□□□□ -1.39
HDAC3-211ENST00000491581 NKX2-1P43699 371 aaPredicted RBP6.34□□□□□ -1.39
HDAC3-211ENST00000491581 AP2S1P53680 142 aaPredicted RBP6.34□□□□□ -1.39
HDAC3-211ENST00000491581 PAX9P55771 341 aa6.34□□□□□ -1.39
HDAC3-211ENST00000491581 FGL1Q08830 312 aa6.34□□□□□ -1.39
HDAC3-211ENST00000491581 SPINK13Q1W4C9 94 aa6.34□□□□□ -1.39
HDAC3-211ENST00000491581 TMEM128Q5BJH2 165 aa6.34□□□□□ -1.39
HDAC3-211ENST00000491581 FAM222AQ5U5X8 452 aa6.34□□□□□ -1.39
HDAC3-211ENST00000491581 OR8G2PQ6IF36 304 aa6.34□□□□□ -1.39
HDAC3-211ENST00000491581 AMTNQ6UX39 209 aa6.34□□□□□ -1.39
HDAC3-211ENST00000491581 ACOT7LQ6ZUV0 252 aa6.34□□□□□ -1.39
HDAC3-211ENST00000491581 OR8I2Q8N0Y5 310 aa6.34□□□□□ -1.39
HDAC3-211ENST00000491581 OR1B1Q8NGR6 318 aa6.34□□□□□ -1.39
HDAC3-211ENST00000491581 COQ8AQ8NI60 647 aa6.34□□□□□ -1.39
HDAC3-211ENST00000491581 RSG1Q9BU20 258 aa6.34□□□□□ -1.39
HDAC3-211ENST00000491581 PARD6GQ9BYG4 376 aaPredicted RBP6.34□□□□□ -1.39
HDAC3-211ENST00000491581 SLC25A39Q9BZJ4 359 aaPredicted RBP6.34□□□□□ -1.39
HDAC3-211ENST00000491581 SRRQ9GZT4 340 aa6.34□□□□□ -1.39
HDAC3-211ENST00000491581 RABL2BQ9UNT1 228 aa6.34□□□□□ -1.39
HDAC3-211ENST00000491581 TRAV12-2A0A075B6T6 113 aa6.33□□□□□ -1.4
HDAC3-211ENST00000491581 A0A0J9YX75 114 aa6.33□□□□□ -1.4
HDAC3-211ENST00000491581 C9orf170A2RU37 121 aa6.33□□□□□ -1.4
HDAC3-211ENST00000491581 SMCO3A2RU48 225 aa6.33□□□□□ -1.4
HDAC3-211ENST00000491581 ZNF98A6NK75 572 aa6.33□□□□□ -1.4
HDAC3-211ENST00000491581 ZNF705GA8MUZ8 300 aaPredicted RBP6.33□□□□□ -1.4
HDAC3-211ENST00000491581 SNRPGP15A8MWD9 76 aa6.33□□□□□ -1.4
HDAC3-211ENST00000491581 CCSO14618 274 aa6.33□□□□□ -1.4
HDAC3-211ENST00000491581 RTL8CO15255 209 aa6.33□□□□□ -1.4
HDAC3-211ENST00000491581 SSSCA1O60232 199 aa6.33□□□□□ -1.4
HDAC3-211ENST00000491581 NOL3O60936 208 aaKnown RBP6.33□□□□□ -1.4
HDAC3-211ENST00000491581 ANXA3P12429 323 aa6.33□□□□□ -1.4
HDAC3-211ENST00000491581 AZU1P20160 251 aa6.33□□□□□ -1.4
HDAC3-211ENST00000491581 ARL16Q0P5N6 197 aa6.33□□□□□ -1.4
HDAC3-211ENST00000491581 KIR3DS1Q14943 382 aa6.33□□□□□ -1.4
HDAC3-211ENST00000491581 MORN5Q5VZ52 161 aa6.33□□□□□ -1.4
HDAC3-211ENST00000491581 BAP18Q8IXM2 172 aa6.33□□□□□ -1.4
HDAC3-211ENST00000491581 CENPSQ8N2Z9 138 aa6.33□□□□□ -1.4
HDAC3-211ENST00000491581 LRTM2Q8N967 370 aa6.33□□□□□ -1.4
HDAC3-211ENST00000491581 C16orf92Q96LL3 132 aa6.33□□□□□ -1.4
HDAC3-211ENST00000491581 SCGB3A2Q96PL1 93 aa6.33□□□□□ -1.4
HDAC3-211ENST00000491581 TRGV9Q99603 122 aa6.33□□□□□ -1.4
HDAC3-211ENST00000491581 YTHDF2Q9Y5A9 579 aaKnown RBP6.33□□□□□ -1.4
HDAC3-211ENST00000491581 PKD1P98161 4303 aa6.33□□□□□ -1.4
HDAC3-211ENST00000491581 DNAH17Q9UFH2 4485 aa6.33□□□□□ -1.4
HDAC3-211ENST00000491581 A0A1B0GVY2 172 aa6.32□□□□□ -1.4
HDAC3-211ENST00000491581 C11orf94C9JXX5 98 aa6.32□□□□□ -1.4
HDAC3-211ENST00000491581 CRXO43186 299 aaPredicted RBP6.32□□□□□ -1.4
HDAC3-211ENST00000491581 SCGB1D2O95969 90 aa6.32□□□□□ -1.4
HDAC3-211ENST00000491581 METTL15P1P0C7V9 234 aa6.32□□□□□ -1.4
HDAC3-211ENST00000491581 PSMB3P49720 205 aa6.32□□□□□ -1.4
HDAC3-211ENST00000491581 RAB11AP62491 216 aa6.32□□□□□ -1.4
HDAC3-211ENST00000491581 AKR1C1Q04828 323 aa6.32□□□□□ -1.4
HDAC3-211ENST00000491581 SLC38A11Q08AI6 406 aa6.32□□□□□ -1.4
HDAC3-211ENST00000491581 PATE2Q6UY27 113 aa6.32□□□□□ -1.4
HDAC3-211ENST00000491581 FOXI2Q6ZQN5 318 aa6.32□□□□□ -1.4
HDAC3-211ENST00000491581 OR4D5Q8NGN0 318 aa6.32□□□□□ -1.4
HDAC3-211ENST00000491581 BCL7BQ9BQE9 202 aa6.32□□□□□ -1.4
HDAC3-211ENST00000491581 DKK2Q9UBU2 259 aa6.32□□□□□ -1.4
HDAC3-211ENST00000491581 LOC102723971A0A1B0GUV8 181 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms