RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 NEU1Q99519 415 aa11.26□□□□□ -0.61
SMPD4-220ENST00000491319 V9GYH0 126 aa11.26□□□□□ -0.61
SMPD4-220ENST00000491319 PIGBOS1A0A0B4J2F0 54 aa11.25□□□□□ -0.61
SMPD4-220ENST00000491319 SNRPGP15A8MWD9 76 aa11.25□□□□□ -0.61
SMPD4-220ENST00000491319 F6UB75 175 aa11.25□□□□□ -0.61
SMPD4-220ENST00000491319 SLC25A6P12236 298 aa11.25□□□□□ -0.61
SMPD4-220ENST00000491319 EMP1P54849 157 aa11.25□□□□□ -0.61
SMPD4-220ENST00000491319 AP3S2P59780 193 aa11.25□□□□□ -0.61
SMPD4-220ENST00000491319 C1orf194Q5T5A4 169 aa11.25□□□□□ -0.61
SMPD4-220ENST00000491319 OR8I2Q8N0Y5 310 aa11.25□□□□□ -0.61
SMPD4-220ENST00000491319 LRTM2Q8N967 370 aa11.25□□□□□ -0.61
SMPD4-220ENST00000491319 THAP8Q8NA92 274 aa11.25□□□□□ -0.61
SMPD4-220ENST00000491319 KRTAP17-1Q9BYP8 105 aa11.25□□□□□ -0.61
SMPD4-220ENST00000491319 MAGT1Q9H0U3 335 aa11.25□□□□□ -0.61
SMPD4-220ENST00000491319 SLC35B3Q9H1N7 401 aa11.25□□□□□ -0.61
SMPD4-220ENST00000491319 NACAE9PAV3 2078 aa11.24□□□□□ -0.61
SMPD4-220ENST00000491319 PRSS46E5RG02 174 aa11.24□□□□□ -0.61
SMPD4-220ENST00000491319 PPP1R1AQ13522 171 aa11.24□□□□□ -0.61
SMPD4-220ENST00000491319 SLC25A32Q9H2D1 315 aa11.24□□□□□ -0.61
SMPD4-220ENST00000491319 WRBO00258 174 aa11.23□□□□□ -0.61
SMPD4-220ENST00000491319 ISLRO14498 428 aa11.23□□□□□ -0.61
SMPD4-220ENST00000491319 SYNGR2O43760 224 aa11.23□□□□□ -0.61
SMPD4-220ENST00000491319 MED6O75586 246 aa11.23□□□□□ -0.61
SMPD4-220ENST00000491319 SFT2D2O95562 160 aa11.23□□□□□ -0.61
SMPD4-220ENST00000491319 HOXB5P09067 269 aa11.23□□□□□ -0.61
SMPD4-220ENST00000491319 PAX9P55771 341 aa11.23□□□□□ -0.61
SMPD4-220ENST00000491319 FAM78BQ5VT40 261 aa11.23□□□□□ -0.61
SMPD4-220ENST00000491319 C20orf173Q96LM9 149 aa11.23□□□□□ -0.61
SMPD4-220ENST00000491319 CLUHP3Q96NS8 147 aa11.23□□□□□ -0.61
SMPD4-220ENST00000491319 CIB3Q96Q77 187 aaPredicted RBP11.23□□□□□ -0.61
SMPD4-220ENST00000491319 NDUFAF3Q9BU61 184 aa11.23□□□□□ -0.61
SMPD4-220ENST00000491319 SLC25A22Q9H936 323 aa11.23□□□□□ -0.61
SMPD4-220ENST00000491319 TMED3Q9Y3Q3 217 aa11.23□□□□□ -0.61
SMPD4-220ENST00000491319 TMEM189A5PLL7 270 aa11.22□□□□□ -0.61
SMPD4-220ENST00000491319 SMIM9A6NGZ8 99 aa11.22□□□□□ -0.61
SMPD4-220ENST00000491319 H3BP45 60 aa11.22□□□□□ -0.61
SMPD4-220ENST00000491319 SPART-AS1P0CW21 52 aa11.22□□□□□ -0.61
SMPD4-220ENST00000491319 GATA2P23769 480 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-220ENST00000491319 PSG9Q00887 426 aa11.22□□□□□ -0.61
SMPD4-220ENST00000491319 C17orf77Q96MU5 243 aa11.22□□□□□ -0.61
SMPD4-220ENST00000491319 SLC25A21Q9BQT8 299 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-220ENST00000491319 RFNGQ9Y644 331 aa11.22□□□□□ -0.61
SMPD4-220ENST00000491319 HERC2O95714 4834 aa11.21□□□□□ -0.61
SMPD4-220ENST00000491319 A0A0J9YX75 114 aa11.21□□□□□ -0.61
SMPD4-220ENST00000491319 ZNF98A6NK75 572 aa11.21□□□□□ -0.61
SMPD4-220ENST00000491319 P0DMU3 169 aa11.21□□□□□ -0.61
SMPD4-220ENST00000491319 FAM231AP0DMU4 169 aa11.21□□□□□ -0.61
SMPD4-220ENST00000491319 FAM231CP0DMU5 169 aa11.21□□□□□ -0.61
SMPD4-220ENST00000491319 GALR1P47211 349 aa11.21□□□□□ -0.61
SMPD4-220ENST00000491319 AKR1C1Q04828 323 aa11.21□□□□□ -0.61
SMPD4-220ENST00000491319 SPANXN5Q5MJ07 72 aa11.21□□□□□ -0.61
SMPD4-220ENST00000491319 FAM222AQ5U5X8 452 aa11.21□□□□□ -0.61
SMPD4-220ENST00000491319 SPATA31B1PQ5VZV4 182 aa11.21□□□□□ -0.61
SMPD4-220ENST00000491319 GGNBP1Q5YKI7 109 aa11.21□□□□□ -0.61
SMPD4-220ENST00000491319 EBLN2Q6P2I7 272 aa11.21□□□□□ -0.61
SMPD4-220ENST00000491319 TMEM182Q6ZP80 229 aaPredicted RBP11.21□□□□□ -0.61
SMPD4-220ENST00000491319 ACOT7LQ6ZUV0 252 aa11.21□□□□□ -0.61
SMPD4-220ENST00000491319 C1orf158Q8N1D5 194 aa11.21□□□□□ -0.61
SMPD4-220ENST00000491319 POM121L12Q8N7R1 296 aa11.21□□□□□ -0.61
SMPD4-220ENST00000491319 C16orf92Q96LL3 132 aa11.21□□□□□ -0.61
SMPD4-220ENST00000491319 RPRMQ9NS64 109 aa11.21□□□□□ -0.61
SMPD4-220ENST00000491319 DKK2Q9UBU2 259 aa11.21□□□□□ -0.61
SMPD4-220ENST00000491319 CFDP00746 253 aaPredicted RBP11.2□□□□□ -0.62
SMPD4-220ENST00000491319 S100A5P33763 92 aa11.2□□□□□ -0.62
SMPD4-220ENST00000491319 MEOX2P50222 304 aa11.2□□□□□ -0.62
SMPD4-220ENST00000491319 RPP30P78346 268 aaKnown RBP11.2□□□□□ -0.62
SMPD4-220ENST00000491319 SAMD13Q5VXD3 122 aa11.2□□□□□ -0.62
SMPD4-220ENST00000491319 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.2□□□□□ -0.62
SMPD4-220ENST00000491319 DEDD2Q8WXF8 326 aa11.2□□□□□ -0.62
SMPD4-220ENST00000491319 C7orf50Q9BRJ6 194 aaKnown RBP11.2□□□□□ -0.62
SMPD4-220ENST00000491319 RSG1Q9BU20 258 aa11.2□□□□□ -0.62
SMPD4-220ENST00000491319 PLA2G2EQ9NZK7 142 aa11.2□□□□□ -0.62
SMPD4-220ENST00000491319 GOLT1BQ9Y3E0 138 aa11.2□□□□□ -0.62
SMPD4-220ENST00000491319 FAT2Q9NYQ8 4349 aa11.19□□□□□ -0.62
SMPD4-220ENST00000491319 CCDC160A6NGH7 325 aa11.19□□□□□ -0.62
SMPD4-220ENST00000491319 ADAP1O75689 374 aa11.19□□□□□ -0.62
SMPD4-220ENST00000491319 ORM2P19652 201 aa11.19□□□□□ -0.62
SMPD4-220ENST00000491319 AMTNQ6UX39 209 aa11.19□□□□□ -0.62
SMPD4-220ENST00000491319 CCDC190Q86UF4 302 aa11.19□□□□□ -0.62
SMPD4-220ENST00000491319 BPIFCQ8NFQ6 507 aa11.19□□□□□ -0.62
SMPD4-220ENST00000491319 OR1B1Q8NGR6 318 aa11.19□□□□□ -0.62
SMPD4-220ENST00000491319 NIPSNAP3BQ9BS92 247 aa11.19□□□□□ -0.62
SMPD4-220ENST00000491319 DOK5Q9P104 306 aa11.19□□□□□ -0.62
SMPD4-220ENST00000491319 SLC45A2Q9UMX9 530 aa11.19□□□□□ -0.62
SMPD4-220ENST00000491319 STRAPQ9Y3F4 350 aaKnown RBP11.19□□□□□ -0.62
SMPD4-220ENST00000491319 LOC102723971A0A1B0GUV8 181 aa11.18□□□□□ -0.62
SMPD4-220ENST00000491319 A8MTW9 85 aa11.18□□□□□ -0.62
SMPD4-220ENST00000491319 M0R2N4 97 aa11.18□□□□□ -0.62
SMPD4-220ENST00000491319 HBE1P02100 147 aa11.18□□□□□ -0.62
SMPD4-220ENST00000491319 IGFL4Q6B9Z1 124 aa11.18□□□□□ -0.62
SMPD4-220ENST00000491319 LINC00336Q6ZUF6 198 aa11.18□□□□□ -0.62
SMPD4-220ENST00000491319 TMEM147Q9BVK8 224 aa11.18□□□□□ -0.62
SMPD4-220ENST00000491319 YTHDF2Q9Y5A9 579 aaKnown RBP11.18□□□□□ -0.62
SMPD4-220ENST00000491319 DNAH2Q9P225 4427 aa11.17□□□□□ -0.62
SMPD4-220ENST00000491319 TEX48A0A1B0GUV7 120 aa11.17□□□□□ -0.62
SMPD4-220ENST00000491319 A0A1B0GVY2 172 aa11.17□□□□□ -0.62
SMPD4-220ENST00000491319 SMCO3A2RU48 225 aa11.17□□□□□ -0.62
SMPD4-220ENST00000491319 HTN3P15516 51 aa11.17□□□□□ -0.62
SMPD4-220ENST00000491319 POLR2GP62487 172 aaKnown RBP eCLIP11.17□□□□□ -0.62
SMPD4-220ENST00000491319 RRN3P1Q2M238 152 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms