RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 Q9H3A6 140 aa13.75□□□□□ -0.21
UPK3B-205ENST00000490360 TEX13DA0A0J9YY54 714 aaPredicted RBP13.74□□□□□ -0.21
UPK3B-205ENST00000490360 ZNF705GA8MUZ8 300 aaPredicted RBP13.74□□□□□ -0.21
UPK3B-205ENST00000490360 GABARAPH6UMI1 98 aa13.74□□□□□ -0.21
UPK3B-205ENST00000490360 GABARAPO95166 117 aa13.74□□□□□ -0.21
UPK3B-205ENST00000490360 CD3DP04234 171 aa13.74□□□□□ -0.21
UPK3B-205ENST00000490360 OR5AC1P0C628 307 aa13.74□□□□□ -0.21
UPK3B-205ENST00000490360 TGFBR1P36897 503 aa13.74□□□□□ -0.21
UPK3B-205ENST00000490360 GALR1P47211 349 aa13.74□□□□□ -0.21
UPK3B-205ENST00000490360 INAFM2P0DMQ5 153 aa13.73□□□□□ -0.21
UPK3B-205ENST00000490360 KRTAP10-2P60368 255 aa13.73□□□□□ -0.21
UPK3B-205ENST00000490360 LYZP61626 148 aa13.73□□□□□ -0.21
UPK3B-205ENST00000490360 SELENOHQ8IZQ5 122 aaKnown RBP13.73□□□□□ -0.21
UPK3B-205ENST00000490360 TMEM256Q8N2U0 113 aa13.73□□□□□ -0.21
UPK3B-205ENST00000490360 RNF141Q8WVD5 230 aa13.73□□□□□ -0.21
UPK3B-205ENST00000490360 ZNF503Q96F45 646 aa13.73□□□□□ -0.21
UPK3B-205ENST00000490360 SLC35E1Q96K37 410 aa13.73□□□□□ -0.21
UPK3B-205ENST00000490360 PTTG2Q9NZH5 202 aa13.73□□□□□ -0.21
UPK3B-205ENST00000490360 C14orf166Q9Y224 244 aaKnown RBP13.73□□□□□ -0.21
UPK3B-205ENST00000490360 CFDP00746 253 aaPredicted RBP13.72□□□□□ -0.21
UPK3B-205ENST00000490360 SULT1A3P0DMM9 295 aa13.72□□□□□ -0.21
UPK3B-205ENST00000490360 SULT1A4P0DMN0 295 aa13.72□□□□□ -0.21
UPK3B-205ENST00000490360 S100A7P31151 101 aa13.72□□□□□ -0.21
UPK3B-205ENST00000490360 ZNF90Q03938 601 aa13.72□□□□□ -0.21
UPK3B-205ENST00000490360 LGI3Q8N145 548 aa13.72□□□□□ -0.21
UPK3B-205ENST00000490360 LHFPL5Q8TAF8 219 aa13.72□□□□□ -0.21
UPK3B-205ENST00000490360 MARCH1Q8TCQ1 289 aa13.72□□□□□ -0.21
UPK3B-205ENST00000490360 NAA60Q9H7X0 242 aa13.72□□□□□ -0.21
UPK3B-205ENST00000490360 MTFP1Q9UDX5 166 aa13.72□□□□□ -0.21
UPK3B-205ENST00000490360 CRXO43186 299 aaPredicted RBP13.71□□□□□ -0.21
UPK3B-205ENST00000490360 ELK1P19419 428 aa13.71□□□□□ -0.21
UPK3B-205ENST00000490360 CNN1P51911 297 aaKnown RBP13.71□□□□□ -0.21
UPK3B-205ENST00000490360 GAMTQ14353 236 aa13.71□□□□□ -0.21
UPK3B-205ENST00000490360 SPINK13Q1W4C9 94 aa13.71□□□□□ -0.21
UPK3B-205ENST00000490360 SCGB2B2Q4G0G5 96 aa13.71□□□□□ -0.21
UPK3B-205ENST00000490360 TMEM268Q5VZI3 342 aa13.71□□□□□ -0.21
UPK3B-205ENST00000490360 OR11H7Q8NGC8 314 aa13.71□□□□□ -0.21
UPK3B-205ENST00000490360 OR4D5Q8NGN0 318 aa13.71□□□□□ -0.21
UPK3B-205ENST00000490360 C15orf40Q8WUR7 153 aa13.71□□□□□ -0.21
UPK3B-205ENST00000490360 C20orf173Q96LM9 149 aa13.71□□□□□ -0.21
UPK3B-205ENST00000490360 UPK3BQ9BT76 320 aa13.71□□□□□ -0.21
UPK3B-205ENST00000490360 SLC45A2Q9UMX9 530 aa13.71□□□□□ -0.21
UPK3B-205ENST00000490360 IGKV1D-37A0A075B6S9 117 aa13.7□□□□□ -0.22
UPK3B-205ENST00000490360 PLAC8L1A1L4L8 177 aa13.7□□□□□ -0.22
UPK3B-205ENST00000490360 TAS2R19P59542 299 aa13.7□□□□□ -0.22
UPK3B-205ENST00000490360 LSM3P62310 102 aaKnown RBP13.7□□□□□ -0.22
UPK3B-205ENST00000490360 SURF2Q15527 256 aaPredicted RBP13.7□□□□□ -0.22
UPK3B-205ENST00000490360 TMEM229BQ8NBD8 167 aa13.7□□□□□ -0.22
UPK3B-205ENST00000490360 OR10J6PQ8NGY7 276 aa13.7□□□□□ -0.22
UPK3B-205ENST00000490360 DTD1Q8TEA8 209 aa13.7□□□□□ -0.22
UPK3B-205ENST00000490360 IL22RA2Q969J5 263 aa13.7□□□□□ -0.22
UPK3B-205ENST00000490360 C16orf74Q96GX8 76 aa13.7□□□□□ -0.22
UPK3B-205ENST00000490360 GPR82Q96P67 336 aa13.7□□□□□ -0.22
UPK3B-205ENST00000490360 TRGV9Q99603 122 aa13.7□□□□□ -0.22
UPK3B-205ENST00000490360 PGPEP1Q9NXJ5 209 aa13.7□□□□□ -0.22
UPK3B-205ENST00000490360 TIMM8BQ9Y5J9 83 aaPredicted RBP13.7□□□□□ -0.22
UPK3B-205ENST00000490360 TMEM56-RWDD3S4R434 201 aa13.7□□□□□ -0.22
UPK3B-205ENST00000490360 M0R2Z0 102 aa13.69□□□□□ -0.22
UPK3B-205ENST00000490360 TAS2R60P59551 318 aa13.69□□□□□ -0.22
UPK3B-205ENST00000490360 GGNBP1Q5YKI7 109 aa13.69□□□□□ -0.22
UPK3B-205ENST00000490360 ZNF493Q6ZR52 646 aa13.69□□□□□ -0.22
UPK3B-205ENST00000490360 OR1B1Q8NGR6 318 aa13.69□□□□□ -0.22
UPK3B-205ENST00000490360 OR52I2Q8NH67 350 aa13.69□□□□□ -0.22
UPK3B-205ENST00000490360 RSG1Q9BU20 258 aa13.69□□□□□ -0.22
UPK3B-205ENST00000490360 HSPB7Q9UBY9 170 aa13.69□□□□□ -0.22
UPK3B-205ENST00000490360 HPGDSO60760 199 aa13.68□□□□□ -0.22
UPK3B-205ENST00000490360 RAB3DO95716 219 aa13.68□□□□□ -0.22
UPK3B-205ENST00000490360 PRM2P04554 102 aa13.68□□□□□ -0.22
UPK3B-205ENST00000490360 ZNF182P17025 639 aaPredicted RBP13.68□□□□□ -0.22
UPK3B-205ENST00000490360 MEF2DQ14814 521 aa13.68□□□□□ -0.22
UPK3B-205ENST00000490360 FCN2Q15485 313 aa13.68□□□□□ -0.22
UPK3B-205ENST00000490360 GPR107Q5VW38 600 aa13.68□□□□□ -0.22
UPK3B-205ENST00000490360 YIPF6Q96EC8 236 aa13.68□□□□□ -0.22
UPK3B-205ENST00000490360 GNPNAT1Q96EK6 184 aaPredicted RBP13.68□□□□□ -0.22
UPK3B-205ENST00000490360 LINC01587Q99440 93 aa13.68□□□□□ -0.22
UPK3B-205ENST00000490360 RTBDNQ9BSG5 229 aaPredicted RBP13.68□□□□□ -0.22
UPK3B-205ENST00000490360 KRTAP1-5Q9BYS1 174 aa13.68□□□□□ -0.22
UPK3B-205ENST00000490360 VCX3AQ9NNX9 186 aa13.68□□□□□ -0.22
UPK3B-205ENST00000490360 BOLA2-SMG1P6H3BVE0 249 aa13.67□□□□□ -0.22
UPK3B-205ENST00000490360 ADAP1O75689 374 aa13.67□□□□□ -0.22
UPK3B-205ENST00000490360 AZU1P20160 251 aa13.67□□□□□ -0.22
UPK3B-205ENST00000490360 CCR6P51684 374 aa13.67□□□□□ -0.22
UPK3B-205ENST00000490360 RNASE12Q5GAN4 147 aaKnown RBP13.67□□□□□ -0.22
UPK3B-205ENST00000490360 STEAP1BQ6NZ63 245 aa13.67□□□□□ -0.22
UPK3B-205ENST00000490360 MZT2AQ6P582 158 aa13.67□□□□□ -0.22
UPK3B-205ENST00000490360 OR4D10Q8NGI6 311 aa13.67□□□□□ -0.22
UPK3B-205ENST00000490360 RXFP4Q8TDU9 374 aa13.67□□□□□ -0.22
UPK3B-205ENST00000490360 SLC25A32Q9H2D1 315 aa13.67□□□□□ -0.22
UPK3B-205ENST00000490360 CRYM-AS1A6NIL9 109 aa13.66□□□□□ -0.22
UPK3B-205ENST00000490360 ZNF98A6NK75 572 aa13.66□□□□□ -0.22
UPK3B-205ENST00000490360 FAM25AB3EWG3 89 aa13.66□□□□□ -0.22
UPK3B-205ENST00000490360 FAM25CB3EWG5 89 aa13.66□□□□□ -0.22
UPK3B-205ENST00000490360 FAM25GB3EWG6 89 aa13.66□□□□□ -0.22
UPK3B-205ENST00000490360 H3BNG1 76 aa13.66□□□□□ -0.22
UPK3B-205ENST00000490360 EREGO14944 169 aa13.66□□□□□ -0.22
UPK3B-205ENST00000490360 M6PRP20645 277 aa13.66□□□□□ -0.22
UPK3B-205ENST00000490360 SSBP1Q04837 148 aaKnown RBP13.66□□□□□ -0.22
UPK3B-205ENST00000490360 OR2F1Q13607 317 aa13.66□□□□□ -0.22
UPK3B-205ENST00000490360 CDPF1Q6NVV7 123 aa13.66□□□□□ -0.22
UPK3B-205ENST00000490360 TMEM144Q7Z5S9 345 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms