RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 SLC25A21Q9BQT8 299 aaPredicted RBP0.72□□□□□ -2.29
CD46-216ENST00000490278 KIF1BO60333 1816 aa0.72□□□□□ -2.29
CD46-216ENST00000490278 TNS3Q68CZ2 1445 aa0.72□□□□□ -2.29
CD46-216ENST00000490278 LAMA4Q16363 1823 aa0.71□□□□□ -2.3
CD46-216ENST00000490278 DOCK3Q8IZD9 2030 aa0.71□□□□□ -2.3
CD46-216ENST00000490278 NCR3O14931 201 aa0.71□□□□□ -2.3
CD46-216ENST00000490278 SERPINA1P01009 418 aa0.71□□□□□ -2.3
CD46-216ENST00000490278 CYBAP13498 195 aa0.71□□□□□ -2.3
CD46-216ENST00000490278 PSG9Q00887 426 aa0.71□□□□□ -2.3
CD46-216ENST00000490278 C2orf82Q6UX34 121 aa0.71□□□□□ -2.3
CD46-216ENST00000490278 Q8N6K4 173 aa0.71□□□□□ -2.3
CD46-216ENST00000490278 OR10K1Q8NGX5 313 aa0.71□□□□□ -2.3
CD46-216ENST00000490278 TP53RKQ96S44 253 aa0.71□□□□□ -2.3
CD46-216ENST00000490278 C9orf16Q9BUW7 83 aa0.71□□□□□ -2.3
CD46-216ENST00000490278 TAS2R7Q9NYW3 318 aa0.71□□□□□ -2.3
CD46-216ENST00000490278 ORMDL1Q9P0S3 153 aa0.71□□□□□ -2.3
CD46-216ENST00000490278 OPTCQ9UBM4 332 aa0.71□□□□□ -2.3
CD46-216ENST00000490278 PCF11O94913 1555 aaKnown RBP0.7□□□□□ -2.3
CD46-216ENST00000490278 PEAK1Q9H792 1746 aa0.7□□□□□ -2.3
CD46-216ENST00000490278 FBN2P35556 2912 aa0.7□□□□□ -2.3
CD46-216ENST00000490278 OBSL1O75147 1896 aa0.7□□□□□ -2.3
CD46-216ENST00000490278 IGHV1-58A0A0C4DH39 117 aa0.7□□□□□ -2.3
CD46-216ENST00000490278 TMEM210A6NLX4 147 aa0.7□□□□□ -2.3
CD46-216ENST00000490278 TAX1BP3O14907 124 aa0.7□□□□□ -2.3
CD46-216ENST00000490278 HMGB3O15347 200 aaKnown RBP0.7□□□□□ -2.3
CD46-216ENST00000490278 ROMO1P60602 79 aa0.7□□□□□ -2.3
CD46-216ENST00000490278 MYL5Q02045 173 aa0.7□□□□□ -2.3
CD46-216ENST00000490278 LINC00322Q6ZN03 302 aaPredicted RBP0.7□□□□□ -2.3
CD46-216ENST00000490278 TMEM70Q9BUB7 260 aa0.7□□□□□ -2.3
CD46-216ENST00000490278 TMEM14CQ9P0S9 112 aa0.7□□□□□ -2.3
CD46-216ENST00000490278 LY96Q9Y6Y9 160 aa0.7□□□□□ -2.3
CD46-216ENST00000490278 KDM6AO15550 1401 aaPredicted RBP0.7□□□□□ -2.3
CD46-216ENST00000490278 E9PCH4 1651 aa0.69□□□□□ -2.3
CD46-216ENST00000490278 NUPR1O60356 82 aa0.69□□□□□ -2.3
CD46-216ENST00000490278 CST8O60676 142 aa0.69□□□□□ -2.3
CD46-216ENST00000490278 GGCTO75223 188 aaKnown RBP0.69□□□□□ -2.3
CD46-216ENST00000490278 HSPE1P61604 102 aaKnown RBP0.69□□□□□ -2.3
CD46-216ENST00000490278 UBE2BP63146 152 aa0.69□□□□□ -2.3
CD46-216ENST00000490278 TAF1AQ15573 450 aaPredicted RBP0.69□□□□□ -2.3
CD46-216ENST00000490278 C4orf22Q6V702 233 aa0.69□□□□□ -2.3
CD46-216ENST00000490278 GKN2Q86XP6 184 aa0.69□□□□□ -2.3
CD46-216ENST00000490278 CANT1Q8WVQ1 401 aa0.69□□□□□ -2.3
CD46-216ENST00000490278 DGCR14Q96DF8 476 aaKnown RBP0.69□□□□□ -2.3
CD46-216ENST00000490278 HSD11B1P28845 292 aa0.68□□□□□ -2.3
CD46-216ENST00000490278 ZNF833PQ6ZTB9 187 aa0.68□□□□□ -2.3
CD46-216ENST00000490278 SBSPONQ8IVN8 264 aa0.68□□□□□ -2.3
CD46-216ENST00000490278 OR5D14Q8NGL3 314 aa0.68□□□□□ -2.3
CD46-216ENST00000490278 LINC00052Q96N35 136 aa0.68□□□□□ -2.3
CD46-216ENST00000490278 PHB2Q99623 299 aa0.68□□□□□ -2.3
CD46-216ENST00000490278 ARMC1Q9NVT9 282 aa0.68□□□□□ -2.3
CD46-216ENST00000490278 PCTPQ9UKL6 214 aa0.68□□□□□ -2.3
CD46-216ENST00000490278 EML5Q05BV3 1969 aa0.68□□□□□ -2.3
CD46-216ENST00000490278 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
CD46-216ENST00000490278 MYH7BA7E2Y1 1941 aa0.68□□□□□ -2.3
CD46-216ENST00000490278 COL1A1P02452 1464 aaPredicted RBP0.67□□□□□ -2.3
CD46-216ENST00000490278 KIAA1549Q9HCM3 1950 aa0.67□□□□□ -2.3
CD46-216ENST00000490278 TRAV10A0A0B4J240 114 aa0.67□□□□□ -2.3
CD46-216ENST00000490278 TLCD2A6NGC4 264 aa0.67□□□□□ -2.3
CD46-216ENST00000490278 E7EUB6 86 aa0.67□□□□□ -2.3
CD46-216ENST00000490278 TMEM256-PLSCR3K7ERE1 68 aa0.67□□□□□ -2.3
CD46-216ENST00000490278 M0R378 163 aa0.67□□□□□ -2.3
CD46-216ENST00000490278 C1QBP02746 253 aa0.67□□□□□ -2.3
CD46-216ENST00000490278 EFNA4P52798 201 aa0.67□□□□□ -2.3
CD46-216ENST00000490278 DSCR4P56555 118 aaPredicted RBP0.67□□□□□ -2.3
CD46-216ENST00000490278 MRPS25P82663 173 aaKnown RBP0.67□□□□□ -2.3
CD46-216ENST00000490278 TMED2Q15363 201 aa0.67□□□□□ -2.3
CD46-216ENST00000490278 PLPP5Q8NEB5 264 aa0.67□□□□□ -2.3
CD46-216ENST00000490278 TEX37Q96LM6 180 aa0.67□□□□□ -2.3
CD46-216ENST00000490278 ARHGEF11O15085 1522 aa0.67□□□□□ -2.3
CD46-216ENST00000490278 MYH10P35580 1976 aa0.66□□□□□ -2.3
CD46-216ENST00000490278 SCN8AQ9UQD0 1980 aa0.66□□□□□ -2.3
CD46-216ENST00000490278 A0A1W2PPM0 123 aa0.66□□□□□ -2.3
CD46-216ENST00000490278 KLF7O75840 302 aaPredicted RBP0.66□□□□□ -2.3
CD46-216ENST00000490278 CD2P06729 351 aa0.66□□□□□ -2.3
CD46-216ENST00000490278 HLA-EP13747 358 aa0.66□□□□□ -2.3
CD46-216ENST00000490278 DYNLT3P51808 116 aa0.66□□□□□ -2.3
CD46-216ENST00000490278 EIF5AL1Q6IS14 154 aaKnown RBP0.66□□□□□ -2.3
CD46-216ENST00000490278 S100A7AQ86SG5 101 aa0.66□□□□□ -2.3
CD46-216ENST00000490278 CHMP6Q96FZ7 201 aa0.66□□□□□ -2.3
CD46-216ENST00000490278 NPCDR1Q9BY65 106 aa0.66□□□□□ -2.3
CD46-216ENST00000490278 AHNAKQ09666 5890 aaKnown RBP0.66□□□□□ -2.3
CD46-216ENST00000490278 MIA2Q96PC5 1412 aa0.65□□□□□ -2.3
CD46-216ENST00000490278 ADGRL3Q9HAR2 1447 aa0.65□□□□□ -2.3
CD46-216ENST00000490278 CNTRLQ7Z7A1 2325 aa0.65□□□□□ -2.3
CD46-216ENST00000490278 B4DSR2 109 aa0.65□□□□□ -2.31
CD46-216ENST00000490278 BANF1O75531 89 aa0.65□□□□□ -2.31
CD46-216ENST00000490278 ERC2-IT1O76042 136 aa0.65□□□□□ -2.31
CD46-216ENST00000490278 CAPZBP47756 277 aa0.65□□□□□ -2.31
CD46-216ENST00000490278 NCALDP61601 193 aa0.65□□□□□ -2.31
CD46-216ENST00000490278 GRINAQ7Z429 371 aa0.65□□□□□ -2.31
CD46-216ENST00000490278 TNFSF18Q9UNG2 199 aa0.65□□□□□ -2.31
CD46-216ENST00000490278 ARL5AQ9Y689 179 aa0.65□□□□□ -2.31
CD46-216ENST00000490278 IGLV3-32A0A0A0MS00 114 aa0.64□□□□□ -2.31
CD46-216ENST00000490278 C17orf112F2Z3M2 114 aa0.64□□□□□ -2.31
CD46-216ENST00000490278 NDUFC2O95298 119 aa0.64□□□□□ -2.31
CD46-216ENST00000490278 CDK6Q00534 326 aa0.64□□□□□ -2.31
CD46-216ENST00000490278 HAGHLQ6PII5 290 aaPredicted RBP0.64□□□□□ -2.31
CD46-216ENST00000490278 TEN1Q86WV5 123 aa0.64□□□□□ -2.31
CD46-216ENST00000490278 ZNF431Q8TF32 576 aaPredicted RBP0.64□□□□□ -2.31
CD46-216ENST00000490278 PSTPIP2Q9H939 334 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms