RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 LINC00588Q9Y4M8 146 aa5.73□□□□□ -1.49
USP39-216ENST00000490193 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.73□□□□□ -1.49
USP39-216ENST00000490193 ANKRD65E5RJM6 399 aa5.72□□□□□ -1.49
USP39-216ENST00000490193 M0QYG6 137 aa5.72□□□□□ -1.49
USP39-216ENST00000490193 CDS2O95674 445 aa5.72□□□□□ -1.49
USP39-216ENST00000490193 APOA1P02647 267 aa5.72□□□□□ -1.49
USP39-216ENST00000490193 TGFBR1P36897 503 aa5.72□□□□□ -1.49
USP39-216ENST00000490193 RPS19P39019 145 aaKnown RBP5.72□□□□□ -1.49
USP39-216ENST00000490193 SUPT4H1P63272 117 aaKnown RBP5.72□□□□□ -1.49
USP39-216ENST00000490193 ANKRD39Q53RE8 183 aa5.72□□□□□ -1.49
USP39-216ENST00000490193 NMSQ5H8A3 153 aa5.72□□□□□ -1.49
USP39-216ENST00000490193 TTC32Q5I0X7 151 aa5.72□□□□□ -1.49
USP39-216ENST00000490193 MZT2BQ6NZ67 158 aa5.72□□□□□ -1.49
USP39-216ENST00000490193 EBLN2Q6P2I7 272 aa5.72□□□□□ -1.49
USP39-216ENST00000490193 NOXA1Q86UR1 476 aa5.72□□□□□ -1.49
USP39-216ENST00000490193 CCDC71LQ8N9Z2 235 aa5.72□□□□□ -1.49
USP39-216ENST00000490193 GPR146Q96CH1 333 aa5.72□□□□□ -1.49
USP39-216ENST00000490193 LINC00052Q96N35 136 aa5.72□□□□□ -1.49
USP39-216ENST00000490193 MAGT1Q9H0U3 335 aa5.72□□□□□ -1.49
USP39-216ENST00000490193 FAT1Q14517 4588 aa5.71□□□□□ -1.49
USP39-216ENST00000490193 PLAC8L1A1L4L8 177 aa5.71□□□□□ -1.5
USP39-216ENST00000490193 EPM2AB3EWF7 344 aa5.71□□□□□ -1.5
USP39-216ENST00000490193 F6UB75 175 aa5.71□□□□□ -1.5
USP39-216ENST00000490193 ATP5G1P05496 136 aa5.71□□□□□ -1.5
USP39-216ENST00000490193 TBPP20226 339 aa5.71□□□□□ -1.5
USP39-216ENST00000490193 ATP5G3P48201 142 aa5.71□□□□□ -1.5
USP39-216ENST00000490193 MEOX2P50222 304 aa5.71□□□□□ -1.5
USP39-216ENST00000490193 KRTAP10-2P60368 255 aa5.71□□□□□ -1.5
USP39-216ENST00000490193 B2MP61769 119 aa5.71□□□□□ -1.5
USP39-216ENST00000490193 SP6Q3SY56 376 aa5.71□□□□□ -1.5
USP39-216ENST00000490193 RNASE10Q5GAN6 216 aaKnown RBP5.71□□□□□ -1.5
USP39-216ENST00000490193 RNASE11Q8TAA1 199 aaKnown RBP5.71□□□□□ -1.5
USP39-216ENST00000490193 LHFPL5Q8TAF8 219 aa5.71□□□□□ -1.5
USP39-216ENST00000490193 ZFAND1Q8TCF1 268 aa5.71□□□□□ -1.5
USP39-216ENST00000490193 ACY3Q96HD9 319 aa5.71□□□□□ -1.5
USP39-216ENST00000490193 ABHD1Q96SE0 405 aa5.71□□□□□ -1.5
USP39-216ENST00000490193 KRTAP1-5Q9BYS1 174 aa5.71□□□□□ -1.5
USP39-216ENST00000490193 TMEM222Q9H0R3 208 aa5.71□□□□□ -1.5
USP39-216ENST00000490193 Q9H3A6 140 aa5.71□□□□□ -1.5
USP39-216ENST00000490193 RPRMQ9NS64 109 aa5.71□□□□□ -1.5
USP39-216ENST00000490193 DOK5Q9P104 306 aa5.71□□□□□ -1.5
USP39-216ENST00000490193 COPZ2Q9P299 210 aa5.71□□□□□ -1.5
USP39-216ENST00000490193 CACFD1Q9UGQ2 172 aa5.71□□□□□ -1.5
USP39-216ENST00000490193 MYCBP2O75592 4640 aa5.71□□□□□ -1.5
USP39-216ENST00000490193 IGKV1D-37A0A075B6S9 117 aa5.7□□□□□ -1.5
USP39-216ENST00000490193 SMIM31A0A1B0GVY4 71 aa5.7□□□□□ -1.5
USP39-216ENST00000490193 A0A1W2PPQ1 181 aa5.7□□□□□ -1.5
USP39-216ENST00000490193 CBY3A6NI87 242 aa5.7□□□□□ -1.5
USP39-216ENST00000490193 CRXO43186 299 aaPredicted RBP5.7□□□□□ -1.5
USP39-216ENST00000490193 NUDT3O95989 172 aa5.7□□□□□ -1.5
USP39-216ENST00000490193 ELK1P19419 428 aa5.7□□□□□ -1.5
USP39-216ENST00000490193 KLF9Q13886 244 aaPredicted RBP5.7□□□□□ -1.5
USP39-216ENST00000490193 SSX7Q7RTT5 188 aa5.7□□□□□ -1.5
USP39-216ENST00000490193 SNX29P2Q8IUI4 249 aa5.7□□□□□ -1.5
USP39-216ENST00000490193 LINC00469Q8N7U9 141 aa5.7□□□□□ -1.5
USP39-216ENST00000490193 OR13C8Q8NGS7 320 aa5.7□□□□□ -1.5
USP39-216ENST00000490193 TERB2Q8NHR7 220 aa5.7□□□□□ -1.5
USP39-216ENST00000490193 GLYATL2Q8WU03 294 aa5.7□□□□□ -1.5
USP39-216ENST00000490193 RNF141Q8WVD5 230 aa5.7□□□□□ -1.5
USP39-216ENST00000490193 RBPMSQ93062 196 aaKnown RBP5.7□□□□□ -1.5
USP39-216ENST00000490193 UPK3BQ9BT76 320 aa5.7□□□□□ -1.5
USP39-216ENST00000490193 TMEM208Q9BTX3 173 aa5.7□□□□□ -1.5
USP39-216ENST00000490193 PBDC1Q9BVG4 233 aa5.7□□□□□ -1.5
USP39-216ENST00000490193 Q9H8V8 135 aa5.7□□□□□ -1.5
USP39-216ENST00000490193 CACNG5Q9UF02 275 aa5.7□□□□□ -1.5
USP39-216ENST00000490193 TEX13DA0A0J9YY54 714 aaPredicted RBP5.69□□□□□ -1.5
USP39-216ENST00000490193 CEBPZOSA8MTT3 80 aa5.69□□□□□ -1.5
USP39-216ENST00000490193 ZNF705GA8MUZ8 300 aaPredicted RBP5.69□□□□□ -1.5
USP39-216ENST00000490193 F5H768 121 aa5.69□□□□□ -1.5
USP39-216ENST00000490193 INSP01308 110 aa5.69□□□□□ -1.5
USP39-216ENST00000490193 CD3DP04234 171 aa5.69□□□□□ -1.5
USP39-216ENST00000490193 OR5AC1P0C628 307 aa5.69□□□□□ -1.5
USP39-216ENST00000490193 INAFM2P0DMQ5 153 aa5.69□□□□□ -1.5
USP39-216ENST00000490193 DEFB130BP0DP73 79 aa5.69□□□□□ -1.5
USP39-216ENST00000490193 DEFB130AP0DP74 79 aa5.69□□□□□ -1.5
USP39-216ENST00000490193 ATP5IP56385 69 aaPredicted RBP5.69□□□□□ -1.5
USP39-216ENST00000490193 ZNF90Q03938 601 aa5.69□□□□□ -1.5
USP39-216ENST00000490193 NEDD8Q15843 81 aa5.69□□□□□ -1.5
USP39-216ENST00000490193 SMUG1Q53HV7 270 aa5.69□□□□□ -1.5
USP39-216ENST00000490193 SELENOHQ8IZQ5 122 aaKnown RBP5.69□□□□□ -1.5
USP39-216ENST00000490193 OR11H7Q8NGC8 314 aa5.69□□□□□ -1.5
USP39-216ENST00000490193 OR4C16Q8NGL9 310 aa5.69□□□□□ -1.5
USP39-216ENST00000490193 ZNF503Q96F45 646 aa5.69□□□□□ -1.5
USP39-216ENST00000490193 C20orf173Q96LM9 149 aa5.69□□□□□ -1.5
USP39-216ENST00000490193 C17orf77Q96MU5 243 aa5.69□□□□□ -1.5
USP39-216ENST00000490193 COMMD3Q9UBI1 195 aa5.69□□□□□ -1.5
USP39-216ENST00000490193 U3KQ87 197 aa5.69□□□□□ -1.5
USP39-216ENST00000490193 VPS13BQ7Z7G8 4022 aa5.69□□□□□ -1.5
USP39-216ENST00000490193 ZFP92A6NM28 416 aa5.68□□□□□ -1.5
USP39-216ENST00000490193 SNRPGP15A8MWD9 76 aa5.68□□□□□ -1.5
USP39-216ENST00000490193 J3KRW8 73 aa5.68□□□□□ -1.5
USP39-216ENST00000490193 DUSP14O95147 198 aaKnown RBP5.68□□□□□ -1.5
USP39-216ENST00000490193 PRM2P04554 102 aa5.68□□□□□ -1.5
USP39-216ENST00000490193 FABP1P07148 127 aa5.68□□□□□ -1.5
USP39-216ENST00000490193 S100A5P33763 92 aa5.68□□□□□ -1.5
USP39-216ENST00000490193 GPX4P36969 197 aaPredicted RBP5.68□□□□□ -1.5
USP39-216ENST00000490193 CNN1P51911 297 aaKnown RBP5.68□□□□□ -1.5
USP39-216ENST00000490193 GAMTQ14353 236 aa5.68□□□□□ -1.5
USP39-216ENST00000490193 CLINT1Q14677 625 aa5.68□□□□□ -1.5
USP39-216ENST00000490193 SPINK13Q1W4C9 94 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms