RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 TOMM20LQ6UXN7 152 aa10.91□□□□□ -0.66
VPS26A-205ENST00000489656 PQLC2Q6ZP29 291 aa10.91□□□□□ -0.66
VPS26A-205ENST00000489656 LINC00305Q7Z4B0 112 aa10.91□□□□□ -0.66
VPS26A-205ENST00000489656 SLC7A5P1Q8MH63 180 aa10.91□□□□□ -0.66
VPS26A-205ENST00000489656 FAM167A-AS1Q96KT0 104 aa10.91□□□□□ -0.66
VPS26A-205ENST00000489656 FAM210AQ96ND0 272 aa10.91□□□□□ -0.66
VPS26A-205ENST00000489656 GNB4Q9HAV0 340 aa10.91□□□□□ -0.66
VPS26A-205ENST00000489656 PUS1Q9Y606 427 aaKnown RBP eCLIP10.91□□□□□ -0.66
VPS26A-205ENST00000489656 C2CD3Q4AC94 2353 aa10.91□□□□□ -0.66
VPS26A-205ENST00000489656 H3BRN7 92 aa10.9□□□□□ -0.66
VPS26A-205ENST00000489656 BMPR1BO00238 502 aa10.9□□□□□ -0.66
VPS26A-205ENST00000489656 NDUFA4O00483 81 aa10.9□□□□□ -0.66
VPS26A-205ENST00000489656 HMGB3O15347 200 aaKnown RBP10.9□□□□□ -0.66
VPS26A-205ENST00000489656 GGCTO75223 188 aaKnown RBP10.9□□□□□ -0.66
VPS26A-205ENST00000489656 TRBV12-3P01733 135 aa10.9□□□□□ -0.66
VPS26A-205ENST00000489656 S100A7P31151 101 aa10.9□□□□□ -0.66
VPS26A-205ENST00000489656 PSMB3P49720 205 aa10.9□□□□□ -0.66
VPS26A-205ENST00000489656 PPT1P50897 306 aa10.9□□□□□ -0.66
VPS26A-205ENST00000489656 FGF8P55075 233 aaPredicted RBP10.9□□□□□ -0.66
VPS26A-205ENST00000489656 USF2Q15853 346 aaPredicted RBP10.9□□□□□ -0.66
VPS26A-205ENST00000489656 TCTEX1D4Q5JR98 221 aa10.9□□□□□ -0.66
VPS26A-205ENST00000489656 UHRF2Q96PU4 802 aa10.9□□□□□ -0.66
VPS26A-205ENST00000489656 SCRT1Q9BWW7 348 aa10.9□□□□□ -0.66
VPS26A-205ENST00000489656 SLC25A39Q9BZJ4 359 aaPredicted RBP10.9□□□□□ -0.66
VPS26A-205ENST00000489656 A0A1B0GUS0 222 aa10.89□□□□□ -0.67
VPS26A-205ENST00000489656 CLPSL1A2RUU4 121 aa10.89□□□□□ -0.67
VPS26A-205ENST00000489656 ANKRD34BA5PLL1 514 aa10.89□□□□□ -0.67
VPS26A-205ENST00000489656 I3L521 148 aa10.89□□□□□ -0.67
VPS26A-205ENST00000489656 EIF3GO75821 320 aaKnown RBP eCLIP10.89□□□□□ -0.67
VPS26A-205ENST00000489656 ARL14EPLP0DKL9 152 aa10.89□□□□□ -0.67
VPS26A-205ENST00000489656 PROK1P58294 105 aa10.89□□□□□ -0.67
VPS26A-205ENST00000489656 MORN5Q5VZ52 161 aa10.89□□□□□ -0.67
VPS26A-205ENST00000489656 UQCC3Q6UW78 93 aa10.89□□□□□ -0.67
VPS26A-205ENST00000489656 STXBP6Q8NFX7 210 aa10.89□□□□□ -0.67
VPS26A-205ENST00000489656 SUN5Q8TC36 379 aa10.89□□□□□ -0.67
VPS26A-205ENST00000489656 SHANK2-AS3Q9BTD1 123 aa10.89□□□□□ -0.67
VPS26A-205ENST00000489656 PBDC1Q9BVG4 233 aa10.89□□□□□ -0.67
VPS26A-205ENST00000489656 SLC25A2Q9BXI2 301 aa10.89□□□□□ -0.67
VPS26A-205ENST00000489656 RNF24Q9Y225 148 aa10.89□□□□□ -0.67
VPS26A-205ENST00000489656 A0A1B0GV50 99 aa10.88□□□□□ -0.67
VPS26A-205ENST00000489656 GCHFRP30047 84 aa10.88□□□□□ -0.67
VPS26A-205ENST00000489656 TAGLN2P37802 199 aaKnown RBP10.88□□□□□ -0.67
VPS26A-205ENST00000489656 SMCPP49901 116 aaPredicted RBP10.88□□□□□ -0.67
VPS26A-205ENST00000489656 GPHB5Q86YW7 130 aa10.88□□□□□ -0.67
VPS26A-205ENST00000489656 C4orf3Q8WVX3 66 aa10.88□□□□□ -0.67
VPS26A-205ENST00000489656 ZNF503Q96F45 646 aa10.88□□□□□ -0.67
VPS26A-205ENST00000489656 SMDT1Q9H4I9 107 aa10.88□□□□□ -0.67
VPS26A-205ENST00000489656 MANBALQ9NQG1 85 aa10.88□□□□□ -0.67
VPS26A-205ENST00000489656 TMEM167BQ9NRX6 74 aa10.88□□□□□ -0.67
VPS26A-205ENST00000489656 RABAC1Q9UI14 185 aa10.88□□□□□ -0.67
VPS26A-205ENST00000489656 RNF114Q9Y508 228 aa10.88□□□□□ -0.67
VPS26A-205ENST00000489656 ARL2-SNX15V9GYD0 113 aa10.88□□□□□ -0.67
VPS26A-205ENST00000489656 MAST4O15021 2626 aa10.88□□□□□ -0.67
VPS26A-205ENST00000489656 NDUFS6O75380 124 aaKnown RBP10.87□□□□□ -0.67
VPS26A-205ENST00000489656 IFNA1P01562 189 aa10.87□□□□□ -0.67
VPS26A-205ENST00000489656 CD5P06127 495 aa10.87□□□□□ -0.67
VPS26A-205ENST00000489656 GUK1Q16774 197 aa10.87□□□□□ -0.67
VPS26A-205ENST00000489656 ZNF506Q5JVG8 444 aa10.87□□□□□ -0.67
VPS26A-205ENST00000489656 TMEM190Q8WZ59 177 aa10.87□□□□□ -0.67
VPS26A-205ENST00000489656 TMPRSS5Q9H3S3 457 aa10.87□□□□□ -0.67
VPS26A-205ENST00000489656 TMEM14CQ9P0S9 112 aa10.87□□□□□ -0.67
VPS26A-205ENST00000489656 NIPBLQ6KC79 2804 aaeCLIP10.87□□□□□ -0.67
VPS26A-205ENST00000489656 TRAV5A0A0B4J249 113 aa10.86□□□□□ -0.67
VPS26A-205ENST00000489656 IGHV3-35A0A0C4DH35 117 aa10.86□□□□□ -0.67
VPS26A-205ENST00000489656 LOC102723971A0A1B0GUV8 181 aa10.86□□□□□ -0.67
VPS26A-205ENST00000489656 RBFOX3A6NFN3 312 aa10.86□□□□□ -0.67
VPS26A-205ENST00000489656 ZNF98A6NK75 572 aa10.86□□□□□ -0.67
VPS26A-205ENST00000489656 OR7C2O60412 319 aa10.86□□□□□ -0.67
VPS26A-205ENST00000489656 HSPB1P04792 205 aaKnown RBP10.86□□□□□ -0.67
VPS26A-205ENST00000489656 BCL2P10415 239 aa10.86□□□□□ -0.67
VPS26A-205ENST00000489656 CRYBB3P26998 211 aa10.86□□□□□ -0.67
VPS26A-205ENST00000489656 OR5B12Q96R08 314 aa10.86□□□□□ -0.67
VPS26A-205ENST00000489656 METTL26Q96S19 204 aa10.86□□□□□ -0.67
VPS26A-205ENST00000489656 PAXXQ9BUH6 204 aa10.86□□□□□ -0.67
VPS26A-205ENST00000489656 U3KQE9 123 aa10.86□□□□□ -0.67
VPS26A-205ENST00000489656 GP9P14770 177 aa10.85□□□□□ -0.67
VPS26A-205ENST00000489656 FAM106AQ4KMX7 169 aa10.85□□□□□ -0.67
VPS26A-205ENST00000489656 TOR2AQ5JU69 321 aa10.85□□□□□ -0.67
VPS26A-205ENST00000489656 FXYD5Q96DB9 178 aa10.85□□□□□ -0.67
VPS26A-205ENST00000489656 OR51M1Q9H341 326 aa10.85□□□□□ -0.67
VPS26A-205ENST00000489656 GNG13Q9P2W3 67 aa10.85□□□□□ -0.67
VPS26A-205ENST00000489656 SETD2Q9BYW2 2564 aaPredicted RBP10.85□□□□□ -0.67
VPS26A-205ENST00000489656 TEP1Q99973 2627 aaKnown RBP10.85□□□□□ -0.67
VPS26A-205ENST00000489656 IGHV4OR15-8A0A075B7B6 117 aa10.84□□□□□ -0.67
VPS26A-205ENST00000489656 A0A087WW49 117 aa10.84□□□□□ -0.67
VPS26A-205ENST00000489656 K7EMT4 169 aa10.84□□□□□ -0.67
VPS26A-205ENST00000489656 MRPS12O15235 138 aaKnown RBP10.84□□□□□ -0.67
VPS26A-205ENST00000489656 ATP6V1G1O75348 118 aa10.84□□□□□ -0.67
VPS26A-205ENST00000489656 CD28P10747 220 aa10.84□□□□□ -0.67
VPS26A-205ENST00000489656 ZP3P21754 424 aa10.84□□□□□ -0.67
VPS26A-205ENST00000489656 UBE2L3P68036 154 aaKnown RBP10.84□□□□□ -0.67
VPS26A-205ENST00000489656 ICAM4Q14773 271 aa10.84□□□□□ -0.67
VPS26A-205ENST00000489656 PEA15Q15121 130 aa10.84□□□□□ -0.67
VPS26A-205ENST00000489656 HAGHQ16775 308 aa10.84□□□□□ -0.67
VPS26A-205ENST00000489656 RPEL1Q2QD12 228 aa10.84□□□□□ -0.67
VPS26A-205ENST00000489656 C1orf194Q5T5A4 169 aa10.84□□□□□ -0.67
VPS26A-205ENST00000489656 UNQ9165/PRO28630Q6UXU0 137 aa10.84□□□□□ -0.67
VPS26A-205ENST00000489656 REC114Q7Z4M0 266 aa10.84□□□□□ -0.67
VPS26A-205ENST00000489656 BPIFA4PQ86YQ2 179 aa10.84□□□□□ -0.67
VPS26A-205ENST00000489656 IQCF2Q8IXL9 164 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms