RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 FAM3BP58499 235 aaPredicted RBP11.95□□□□□ -0.5
TOP3B-217ENST00000489581 OR2F1Q13607 317 aa11.95□□□□□ -0.5
TOP3B-217ENST00000489581 GAMTQ14353 236 aa11.95□□□□□ -0.5
TOP3B-217ENST00000489581 C1orf194Q5T5A4 169 aa11.95□□□□□ -0.5
TOP3B-217ENST00000489581 OR8I2Q8N0Y5 310 aa11.95□□□□□ -0.5
TOP3B-217ENST00000489581 LGI3Q8N145 548 aa11.95□□□□□ -0.5
TOP3B-217ENST00000489581 DTD1Q8TEA8 209 aa11.95□□□□□ -0.5
TOP3B-217ENST00000489581 C20orf173Q96LM9 149 aa11.95□□□□□ -0.5
TOP3B-217ENST00000489581 TMEM208Q9BTX3 173 aa11.95□□□□□ -0.5
TOP3B-217ENST00000489581 TMEM56-RWDD3S4R434 201 aa11.95□□□□□ -0.5
TOP3B-217ENST00000489581 ZNF705GA8MUZ8 300 aaPredicted RBP11.94□□□□□ -0.5
TOP3B-217ENST00000489581 C16orf92Q96LL3 132 aa11.94□□□□□ -0.5
TOP3B-217ENST00000489581 RBKSQ9H477 322 aa11.94□□□□□ -0.5
TOP3B-217ENST00000489581 RPRMQ9NS64 109 aa11.94□□□□□ -0.5
TOP3B-217ENST00000489581 DOK5Q9P104 306 aa11.94□□□□□ -0.5
TOP3B-217ENST00000489581 CACFD1Q9UGQ2 172 aa11.94□□□□□ -0.5
TOP3B-217ENST00000489581 GPR132Q9UNW8 380 aa11.94□□□□□ -0.5
TOP3B-217ENST00000489581 NBDYA0A0U1RRE5 68 aa11.93□□□□□ -0.5
TOP3B-217ENST00000489581 SNRPGP15A8MWD9 76 aa11.93□□□□□ -0.5
TOP3B-217ENST00000489581 SURF2Q15527 256 aaPredicted RBP11.93□□□□□ -0.5
TOP3B-217ENST00000489581 C6orf223Q8N319 242 aa11.93□□□□□ -0.5
TOP3B-217ENST00000489581 ZNRF2Q8NHG8 242 aa11.93□□□□□ -0.5
TOP3B-217ENST00000489581 SLC35E1Q96K37 410 aa11.93□□□□□ -0.5
TOP3B-217ENST00000489581 IGF2BP2-AS1Q96M15 143 aa11.93□□□□□ -0.5
TOP3B-217ENST00000489581 HSPB7Q9UBY9 170 aa11.93□□□□□ -0.5
TOP3B-217ENST00000489581 DISC1C4P0D8 188 aa11.92□□□□□ -0.5
TOP3B-217ENST00000489581 GABARAPH6UMI1 98 aa11.92□□□□□ -0.5
TOP3B-217ENST00000489581 GABARAPO95166 117 aa11.92□□□□□ -0.5
TOP3B-217ENST00000489581 NUDT3O95989 172 aa11.92□□□□□ -0.5
TOP3B-217ENST00000489581 DEFB130BP0DP73 79 aa11.92□□□□□ -0.5
TOP3B-217ENST00000489581 DEFB130AP0DP74 79 aa11.92□□□□□ -0.5
TOP3B-217ENST00000489581 ZNF182P17025 639 aaPredicted RBP11.92□□□□□ -0.5
TOP3B-217ENST00000489581 GPX4P36969 197 aaPredicted RBP11.92□□□□□ -0.5
TOP3B-217ENST00000489581 AMTNQ6UX39 209 aa11.92□□□□□ -0.5
TOP3B-217ENST00000489581 C15orf40Q8WUR7 153 aa11.92□□□□□ -0.5
TOP3B-217ENST00000489581 AP3S1Q92572 193 aa11.92□□□□□ -0.5
TOP3B-217ENST00000489581 A8MTW9 85 aa11.91□□□□□ -0.5
TOP3B-217ENST00000489581 F5H768 121 aa11.91□□□□□ -0.5
TOP3B-217ENST00000489581 M0R2Z0 102 aa11.91□□□□□ -0.5
TOP3B-217ENST00000489581 FABP1P07148 127 aa11.91□□□□□ -0.5
TOP3B-217ENST00000489581 CCR6P51684 374 aa11.91□□□□□ -0.5
TOP3B-217ENST00000489581 SMCO1Q147U7 214 aa11.91□□□□□ -0.5
TOP3B-217ENST00000489581 FCN2Q15485 313 aa11.91□□□□□ -0.5
TOP3B-217ENST00000489581 OR4C16Q8NGL9 310 aa11.91□□□□□ -0.5
TOP3B-217ENST00000489581 IL22RA2Q969J5 263 aa11.91□□□□□ -0.5
TOP3B-217ENST00000489581 RSG1Q9BU20 258 aa11.91□□□□□ -0.5
TOP3B-217ENST00000489581 NAA50Q9GZZ1 169 aaKnown RBP11.91□□□□□ -0.5
TOP3B-217ENST00000489581 KCNIP3Q9Y2W7 256 aa11.91□□□□□ -0.5
TOP3B-217ENST00000489581 LYRM9A8MSI8 78 aa11.9□□□□□ -0.5
TOP3B-217ENST00000489581 ALDH3B2P48448 385 aa11.9□□□□□ -0.5
TOP3B-217ENST00000489581 MEOX2P50222 304 aa11.9□□□□□ -0.5
TOP3B-217ENST00000489581 SSBP1Q04837 148 aaKnown RBP11.9□□□□□ -0.5
TOP3B-217ENST00000489581 SPINK13Q1W4C9 94 aa11.9□□□□□ -0.5
TOP3B-217ENST00000489581 LYZL2Q7Z4W2 148 aa11.9□□□□□ -0.5
TOP3B-217ENST00000489581 OR11H7Q8NGC8 314 aa11.9□□□□□ -0.5
TOP3B-217ENST00000489581 C17orf77Q96MU5 243 aa11.9□□□□□ -0.5
TOP3B-217ENST00000489581 TRGV9Q99603 122 aa11.9□□□□□ -0.5
TOP3B-217ENST00000489581 SLC25A32Q9H2D1 315 aa11.9□□□□□ -0.5
TOP3B-217ENST00000489581 MIXL1Q9H2W2 232 aa11.9□□□□□ -0.5
TOP3B-217ENST00000489581 SLC25A22Q9H936 323 aa11.9□□□□□ -0.5
TOP3B-217ENST00000489581 CRXO43186 299 aaPredicted RBP11.89□□□□□ -0.51
TOP3B-217ENST00000489581 AKAIN1P0CW23 69 aa11.89□□□□□ -0.51
TOP3B-217ENST00000489581 GALR1P47211 349 aa11.89□□□□□ -0.51
TOP3B-217ENST00000489581 CNN1P51911 297 aaKnown RBP11.89□□□□□ -0.51
TOP3B-217ENST00000489581 SAMD13Q5VXD3 122 aa11.89□□□□□ -0.51
TOP3B-217ENST00000489581 IGFL4Q6B9Z1 124 aa11.89□□□□□ -0.51
TOP3B-217ENST00000489581 OR51S1Q8NGJ8 323 aa11.89□□□□□ -0.51
TOP3B-217ENST00000489581 IGKV1OR2-108A0A075B7D4 117 aa11.88□□□□□ -0.51
TOP3B-217ENST00000489581 A0A0B4J2A0 478 aa11.88□□□□□ -0.51
TOP3B-217ENST00000489581 AZU1P20160 251 aa11.88□□□□□ -0.51
TOP3B-217ENST00000489581 CCL18P55774 89 aa11.88□□□□□ -0.51
TOP3B-217ENST00000489581 ATP5IP56385 69 aaPredicted RBP11.88□□□□□ -0.51
TOP3B-217ENST00000489581 CTF1Q16619 201 aa11.88□□□□□ -0.51
TOP3B-217ENST00000489581 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.88□□□□□ -0.51
TOP3B-217ENST00000489581 BAP18Q8IXM2 172 aa11.88□□□□□ -0.51
TOP3B-217ENST00000489581 Q8N1X5 172 aa11.88□□□□□ -0.51
TOP3B-217ENST00000489581 OR1S1Q8NH92 325 aa11.88□□□□□ -0.51
TOP3B-217ENST00000489581 SHPKQ9UHJ6 478 aa11.88□□□□□ -0.51
TOP3B-217ENST00000489581 PAIP2BQ9ULR5 123 aaKnown RBP11.88□□□□□ -0.51
TOP3B-217ENST00000489581 LINC00588Q9Y4M8 146 aa11.88□□□□□ -0.51
TOP3B-217ENST00000489581 APOBP04114 4563 aaKnown RBP11.88□□□□□ -0.51
TOP3B-217ENST00000489581 ZNF98A6NK75 572 aa11.87□□□□□ -0.51
TOP3B-217ENST00000489581 RGS5O15539 181 aa11.87□□□□□ -0.51
TOP3B-217ENST00000489581 DUSP14O95147 198 aaKnown RBP11.87□□□□□ -0.51
TOP3B-217ENST00000489581 INSP01308 110 aa11.87□□□□□ -0.51
TOP3B-217ENST00000489581 IAPPP10997 89 aa11.87□□□□□ -0.51
TOP3B-217ENST00000489581 AKR1C4P17516 323 aa11.87□□□□□ -0.51
TOP3B-217ENST00000489581 SPATA12Q7Z6I5 190 aa11.87□□□□□ -0.51
TOP3B-217ENST00000489581 CLVS1Q8IUQ0 354 aaPredicted RBP11.87□□□□□ -0.51
TOP3B-217ENST00000489581 SMIM4Q8WVI0 70 aa11.87□□□□□ -0.51
TOP3B-217ENST00000489581 PRRT1Q99946 306 aa11.87□□□□□ -0.51
TOP3B-217ENST00000489581 SCRT2Q9NQ03 307 aa11.87□□□□□ -0.51
TOP3B-217ENST00000489581 TRAV12-2A0A075B6T6 113 aa11.86□□□□□ -0.51
TOP3B-217ENST00000489581 PLAC8L1A1L4L8 177 aa11.86□□□□□ -0.51
TOP3B-217ENST00000489581 CTDSP2O14595 271 aa11.86□□□□□ -0.51
TOP3B-217ENST00000489581 ATP5G1P05496 136 aa11.86□□□□□ -0.51
TOP3B-217ENST00000489581 ATP5G3P48201 142 aa11.86□□□□□ -0.51
TOP3B-217ENST00000489581 MRPS10P82664 201 aaKnown RBP11.86□□□□□ -0.51
TOP3B-217ENST00000489581 RNF182Q8N6D2 247 aa11.86□□□□□ -0.51
TOP3B-217ENST00000489581 THAP8Q8NA92 274 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms