RNA–Protein interactions for RNA: ENST00000489318.1

C9orf3-220, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-220ENST00000489318 WFDC12Q8WWY7 111 aa8.86□□□□□ -0.99
C9orf3-220ENST00000489318 ZNF503Q96F45 646 aa8.86□□□□□ -0.99
C9orf3-220ENST00000489318 UHRF2Q96PU4 802 aa8.86□□□□□ -0.99
C9orf3-220ENST00000489318 SHANK2-AS3Q9BTD1 123 aa8.86□□□□□ -0.99
C9orf3-220ENST00000489318 PBDC1Q9BVG4 233 aa8.86□□□□□ -0.99
C9orf3-220ENST00000489318 MANBALQ9NQG1 85 aa8.86□□□□□ -0.99
C9orf3-220ENST00000489318 PUS1Q9Y606 427 aaKnown RBP eCLIP8.86□□□□□ -0.99
C9orf3-220ENST00000489318 SETXQ7Z333 2677 aaKnown RBP8.85□□□□□ -0.99
C9orf3-220ENST00000489318 A0A1B0GV50 99 aa8.85□□□□□ -0.99
C9orf3-220ENST00000489318 PPP5D1E7EU14 171 aa8.85□□□□□ -0.99
C9orf3-220ENST00000489318 IFNA1P01562 189 aa8.85□□□□□ -0.99
C9orf3-220ENST00000489318 TRBV12-3P01733 135 aa8.85□□□□□ -0.99
C9orf3-220ENST00000489318 CRYBA1P05813 215 aa8.85□□□□□ -0.99
C9orf3-220ENST00000489318 LGALS1P09382 135 aaKnown RBP8.85□□□□□ -0.99
C9orf3-220ENST00000489318 GCHFRP30047 84 aa8.85□□□□□ -0.99
C9orf3-220ENST00000489318 SRSF3P84103 164 aaKnown RBP8.85□□□□□ -0.99
C9orf3-220ENST00000489318 GUK1Q16774 197 aa8.85□□□□□ -0.99
C9orf3-220ENST00000489318 TOR2AQ5JU69 321 aa8.85□□□□□ -0.99
C9orf3-220ENST00000489318 TOMM20LQ6UXN7 152 aa8.85□□□□□ -0.99
C9orf3-220ENST00000489318 S100A7AQ86SG5 101 aa8.85□□□□□ -0.99
C9orf3-220ENST00000489318 STXBP6Q8NFX7 210 aa8.85□□□□□ -0.99
C9orf3-220ENST00000489318 OR4X2Q8NGF9 303 aa8.85□□□□□ -0.99
C9orf3-220ENST00000489318 LINC01006Q8NI28 216 aa8.85□□□□□ -0.99
C9orf3-220ENST00000489318 CITED4Q96RK1 184 aa8.85□□□□□ -0.99
C9orf3-220ENST00000489318 SLC25A39Q9BZJ4 359 aaPredicted RBP8.85□□□□□ -0.99
C9orf3-220ENST00000489318 CLPSL1A2RUU4 121 aa8.84□□□□□ -0.99
C9orf3-220ENST00000489318 RBFOX3A6NFN3 312 aa8.84□□□□□ -0.99
C9orf3-220ENST00000489318 BMPR1BO00238 502 aa8.84□□□□□ -0.99
C9orf3-220ENST00000489318 NDUFA4O00483 81 aa8.84□□□□□ -0.99
C9orf3-220ENST00000489318 IGHV3-11P01762 117 aa8.84□□□□□ -0.99
C9orf3-220ENST00000489318 GP9P14770 177 aa8.84□□□□□ -0.99
C9orf3-220ENST00000489318 ICAM4Q14773 271 aa8.84□□□□□ -0.99
C9orf3-220ENST00000489318 TCTEX1D4Q5JR98 221 aa8.84□□□□□ -0.99
C9orf3-220ENST00000489318 OR5AU1Q8NGC0 362 aa8.84□□□□□ -0.99
C9orf3-220ENST00000489318 TMPRSS5Q9H3S3 457 aa8.84□□□□□ -0.99
C9orf3-220ENST00000489318 GNB4Q9HAV0 340 aa8.84□□□□□ -0.99
C9orf3-220ENST00000489318 TMEM167BQ9NRX6 74 aa8.84□□□□□ -0.99
C9orf3-220ENST00000489318 TMEM14CQ9P0S9 112 aa8.84□□□□□ -0.99
C9orf3-220ENST00000489318 PEF1Q9UBV8 284 aaKnown RBP8.84□□□□□ -0.99
C9orf3-220ENST00000489318 CUBNO60494 3623 aa8.83□□□□□ -1
C9orf3-220ENST00000489318 F8P00451 2351 aa8.83□□□□□ -1
C9orf3-220ENST00000489318 TRAV5A0A0B4J249 113 aa8.83□□□□□ -1
C9orf3-220ENST00000489318 MRPS12O15235 138 aaKnown RBP8.83□□□□□ -1
C9orf3-220ENST00000489318 GGCTO75223 188 aaKnown RBP8.83□□□□□ -1
C9orf3-220ENST00000489318 HSPB1P04792 205 aaKnown RBP8.83□□□□□ -1
C9orf3-220ENST00000489318 S100A1P23297 94 aa8.83□□□□□ -1
C9orf3-220ENST00000489318 S100A7P31151 101 aa8.83□□□□□ -1
C9orf3-220ENST00000489318 CDX1P47902 265 aaPredicted RBP8.83□□□□□ -1
C9orf3-220ENST00000489318 PEA15Q15121 130 aa8.83□□□□□ -1
C9orf3-220ENST00000489318 TMEM190Q8WZ59 177 aa8.83□□□□□ -1
C9orf3-220ENST00000489318 TXNDC17Q9BRA2 123 aa8.83□□□□□ -1
C9orf3-220ENST00000489318 GNG13Q9P2W3 67 aa8.83□□□□□ -1
C9orf3-220ENST00000489318 RABAC1Q9UI14 185 aa8.83□□□□□ -1
C9orf3-220ENST00000489318 RNF24Q9Y225 148 aa8.83□□□□□ -1
C9orf3-220ENST00000489318 ANKRD34BA5PLL1 514 aa8.82□□□□□ -1
C9orf3-220ENST00000489318 ZNF98A6NK75 572 aa8.82□□□□□ -1
C9orf3-220ENST00000489318 I3L521 148 aa8.82□□□□□ -1
C9orf3-220ENST00000489318 OR7C2O60412 319 aa8.82□□□□□ -1
C9orf3-220ENST00000489318 ZP3P21754 424 aa8.82□□□□□ -1
C9orf3-220ENST00000489318 UBE2L3P68036 154 aaKnown RBP8.82□□□□□ -1
C9orf3-220ENST00000489318 MEF2BQ02080 365 aaPredicted RBP8.82□□□□□ -1
C9orf3-220ENST00000489318 HAGHQ16775 308 aa8.82□□□□□ -1
C9orf3-220ENST00000489318 OR4F5Q8NH21 305 aa8.82□□□□□ -1
C9orf3-220ENST00000489318 C4orf3Q8WVX3 66 aa8.82□□□□□ -1
C9orf3-220ENST00000489318 FXYD5Q96DB9 178 aa8.82□□□□□ -1
C9orf3-220ENST00000489318 RARRES2Q99969 163 aa8.82□□□□□ -1
C9orf3-220ENST00000489318 OR51M1Q9H341 326 aa8.82□□□□□ -1
C9orf3-220ENST00000489318 TMEM231Q9H6L2 316 aa8.82□□□□□ -1
C9orf3-220ENST00000489318 VAX2Q9UIW0 290 aa8.82□□□□□ -1
C9orf3-220ENST00000489318 U3KQE9 123 aa8.82□□□□□ -1
C9orf3-220ENST00000489318 TMEM218A2RU14 115 aa8.81□□□□□ -1
C9orf3-220ENST00000489318 KRBOX1C9JBD0 128 aa8.81□□□□□ -1
C9orf3-220ENST00000489318 C9JQL5 133 aa8.81□□□□□ -1
C9orf3-220ENST00000489318 PYYP10082 97 aa8.81□□□□□ -1
C9orf3-220ENST00000489318 CRYBB3P26998 211 aa8.81□□□□□ -1
C9orf3-220ENST00000489318 PROK1P58294 105 aa8.81□□□□□ -1
C9orf3-220ENST00000489318 C10orf91Q5T1B1 145 aa8.81□□□□□ -1
C9orf3-220ENST00000489318 GPHB5Q86YW7 130 aa8.81□□□□□ -1
C9orf3-220ENST00000489318 PAXXQ9BUH6 204 aa8.81□□□□□ -1
C9orf3-220ENST00000489318 EIF5A2Q9GZV4 153 aaKnown RBP8.81□□□□□ -1
C9orf3-220ENST00000489318 IGHV3-35A0A0C4DH35 117 aa8.8□□□□□ -1
C9orf3-220ENST00000489318 A0A1W2PRE2 83 aa8.8□□□□□ -1
C9orf3-220ENST00000489318 FAM74A7A6NL05 159 aa8.8□□□□□ -1
C9orf3-220ENST00000489318 A8MWP6 167 aa8.8□□□□□ -1
C9orf3-220ENST00000489318 BUB3O43684 328 aa8.8□□□□□ -1
C9orf3-220ENST00000489318 PAGE4O60829 102 aa8.8□□□□□ -1
C9orf3-220ENST00000489318 SRP19P09132 144 aaKnown RBP8.8□□□□□ -1
C9orf3-220ENST00000489318 IGLC2P0DOY2 106 aa8.8□□□□□ -1
C9orf3-220ENST00000489318 ADCYAP1P18509 176 aa8.8□□□□□ -1
C9orf3-220ENST00000489318 CD81P60033 236 aa8.8□□□□□ -1
C9orf3-220ENST00000489318 C1orf194Q5T5A4 169 aa8.8□□□□□ -1
C9orf3-220ENST00000489318 LEMD1Q68G75 181 aa8.8□□□□□ -1
C9orf3-220ENST00000489318 UNQ9165/PRO28630Q6UXU0 137 aa8.8□□□□□ -1
C9orf3-220ENST00000489318 REC114Q7Z4M0 266 aa8.8□□□□□ -1
C9orf3-220ENST00000489318 BPIFA4PQ86YQ2 179 aa8.8□□□□□ -1
C9orf3-220ENST00000489318 IQCF2Q8IXL9 164 aa8.8□□□□□ -1
C9orf3-220ENST00000489318 LINC00052Q96N35 136 aa8.8□□□□□ -1
C9orf3-220ENST00000489318 METTL26Q96S19 204 aa8.8□□□□□ -1
C9orf3-220ENST00000489318 TREM1Q9NP99 234 aa8.8□□□□□ -1
C9orf3-220ENST00000489318 YTHDF2Q9Y5A9 579 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms