RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 CYP2G1PQ6ZSU1 146 aa11.69□□□□□ -0.54
CTDSP1-209ENST00000488627 TRPT1Q86TN4 253 aaKnown RBP11.69□□□□□ -0.54
CTDSP1-209ENST00000488627 C17orf77Q96MU5 243 aa11.69□□□□□ -0.54
CTDSP1-209ENST00000488627 MARVELD1Q9BSK0 173 aa11.69□□□□□ -0.54
CTDSP1-209ENST00000488627 NPVFQ9HCQ7 196 aa11.69□□□□□ -0.54
CTDSP1-209ENST00000488627 SLC45A2Q9UMX9 530 aa11.69□□□□□ -0.54
CTDSP1-209ENST00000488627 LSM5Q9Y4Y9 91 aaKnown RBP11.69□□□□□ -0.54
CTDSP1-209ENST00000488627 SMCO3A2RU48 225 aa11.68□□□□□ -0.54
CTDSP1-209ENST00000488627 DEDDO75618 318 aa11.68□□□□□ -0.54
CTDSP1-209ENST00000488627 ZFAND6Q6FIF0 208 aa11.68□□□□□ -0.54
CTDSP1-209ENST00000488627 GSG1LQ6UXU4 331 aa11.68□□□□□ -0.54
CTDSP1-209ENST00000488627 BPIFCQ8NFQ6 507 aa11.68□□□□□ -0.54
CTDSP1-209ENST00000488627 GGACTQ9BVM4 153 aa11.68□□□□□ -0.54
CTDSP1-209ENST00000488627 STARD9Q9P2P6 4700 aa11.68□□□□□ -0.54
CTDSP1-209ENST00000488627 ZNF98A6NK75 572 aa11.67□□□□□ -0.54
CTDSP1-209ENST00000488627 INMT-MINDY4F8WBC2 141 aa11.67□□□□□ -0.54
CTDSP1-209ENST00000488627 L7N2F9 121 aa11.67□□□□□ -0.54
CTDSP1-209ENST00000488627 SOCS3O14543 225 aa11.67□□□□□ -0.54
CTDSP1-209ENST00000488627 ORM2P19652 201 aa11.67□□□□□ -0.54
CTDSP1-209ENST00000488627 PLP1P60201 277 aa11.67□□□□□ -0.54
CTDSP1-209ENST00000488627 VAMP2P63027 116 aa11.67□□□□□ -0.54
CTDSP1-209ENST00000488627 RAB32Q13637 225 aa11.67□□□□□ -0.54
CTDSP1-209ENST00000488627 PSMG4Q5JS54 123 aa11.67□□□□□ -0.54
CTDSP1-209ENST00000488627 STHQ8IWL8 128 aa11.67□□□□□ -0.54
CTDSP1-209ENST00000488627 GPN1Q9HCN4 374 aaPredicted RBP11.67□□□□□ -0.54
CTDSP1-209ENST00000488627 FBXL17Q9UF56 701 aa11.67□□□□□ -0.54
CTDSP1-209ENST00000488627 FAM24AA6NFZ4 105 aa11.66□□□□□ -0.54
CTDSP1-209ENST00000488627 EWSR1Q01844 656 aaKnown RBP eCLIP11.66□□□□□ -0.54
CTDSP1-209ENST00000488627 ACTL10Q5JWF8 245 aa11.66□□□□□ -0.54
CTDSP1-209ENST00000488627 OR8I2Q8N0Y5 310 aa11.66□□□□□ -0.54
CTDSP1-209ENST00000488627 OR1B1Q8NGR6 318 aa11.66□□□□□ -0.54
CTDSP1-209ENST00000488627 A0A0J9YWU9 116 aa11.65□□□□□ -0.54
CTDSP1-209ENST00000488627 PRAF2O60831 178 aa11.65□□□□□ -0.54
CTDSP1-209ENST00000488627 CA1P00915 261 aaPredicted RBP11.65□□□□□ -0.54
CTDSP1-209ENST00000488627 SNRPD3P62318 126 aaKnown RBP11.65□□□□□ -0.54
CTDSP1-209ENST00000488627 SELENOTP62341 195 aa11.65□□□□□ -0.54
CTDSP1-209ENST00000488627 TEPPQ6URK8 271 aa11.65□□□□□ -0.54
CTDSP1-209ENST00000488627 GATAD1Q8WUU5 269 aa11.65□□□□□ -0.54
CTDSP1-209ENST00000488627 PPP1R14BQ96C90 147 aa11.65□□□□□ -0.54
CTDSP1-209ENST00000488627 SLC25A32Q9H2D1 315 aa11.65□□□□□ -0.54
CTDSP1-209ENST00000488627 LYRM2Q9NU23 88 aaPredicted RBP11.65□□□□□ -0.54
CTDSP1-209ENST00000488627 MGAT4CQ9UBM8 478 aa11.65□□□□□ -0.54
CTDSP1-209ENST00000488627 CSMD3Q7Z407 3707 aa11.64□□□□□ -0.55
CTDSP1-209ENST00000488627 H3BRN7 92 aa11.64□□□□□ -0.55
CTDSP1-209ENST00000488627 CST7O76096 145 aa11.64□□□□□ -0.55
CTDSP1-209ENST00000488627 SIX6O95475 246 aa11.64□□□□□ -0.55
CTDSP1-209ENST00000488627 LINC00869P0C866 280 aa11.64□□□□□ -0.55
CTDSP1-209ENST00000488627 BCAP31P51572 246 aa11.64□□□□□ -0.55
CTDSP1-209ENST00000488627 CAV2P51636 162 aa11.64□□□□□ -0.55
CTDSP1-209ENST00000488627 DEFA1P59665 94 aa11.64□□□□□ -0.55
CTDSP1-209ENST00000488627 DEFA3P59666 94 aa11.64□□□□□ -0.55
CTDSP1-209ENST00000488627 SLC38A11Q08AI6 406 aa11.64□□□□□ -0.55
CTDSP1-209ENST00000488627 PATE2Q6UY27 113 aa11.64□□□□□ -0.55
CTDSP1-209ENST00000488627 TMEM252Q8N6L7 170 aa11.64□□□□□ -0.55
CTDSP1-209ENST00000488627 IL17DQ8TAD2 202 aa11.64□□□□□ -0.55
CTDSP1-209ENST00000488627 SHANK2-AS3Q9BTD1 123 aa11.64□□□□□ -0.55
CTDSP1-209ENST00000488627 TMEM147Q9BVK8 224 aa11.64□□□□□ -0.55
CTDSP1-209ENST00000488627 SCRT1Q9BWW7 348 aa11.64□□□□□ -0.55
CTDSP1-209ENST00000488627 SLC25A39Q9BZJ4 359 aaPredicted RBP11.64□□□□□ -0.55
CTDSP1-209ENST00000488627 DOK5Q9P104 306 aa11.64□□□□□ -0.55
CTDSP1-209ENST00000488627 RYR3Q15413 4870 aa11.64□□□□□ -0.55
CTDSP1-209ENST00000488627 IGSF23A1L1A6 192 aa11.63□□□□□ -0.55
CTDSP1-209ENST00000488627 H3BMM0 161 aa11.63□□□□□ -0.55
CTDSP1-209ENST00000488627 AGPAT2O15120 278 aa11.63□□□□□ -0.55
CTDSP1-209ENST00000488627 HYPMO75409 117 aa11.63□□□□□ -0.55
CTDSP1-209ENST00000488627 SPP1P10451 314 aa11.63□□□□□ -0.55
CTDSP1-209ENST00000488627 C4BPBP20851 252 aa11.63□□□□□ -0.55
CTDSP1-209ENST00000488627 DEFB1P60022 68 aa11.63□□□□□ -0.55
CTDSP1-209ENST00000488627 S100A10P60903 97 aa11.63□□□□□ -0.55
CTDSP1-209ENST00000488627 TMEM217Q8N7C4 229 aa11.63□□□□□ -0.55
CTDSP1-209ENST00000488627 MGST2Q99735 147 aa11.63□□□□□ -0.55
CTDSP1-209ENST00000488627 RSG1Q9BU20 258 aa11.63□□□□□ -0.55
CTDSP1-209ENST00000488627 SLC25A22Q9H936 323 aa11.63□□□□□ -0.55
CTDSP1-209ENST00000488627 GOSR2O14653 212 aa11.62□□□□□ -0.55
CTDSP1-209ENST00000488627 ATF4P18848 351 aaPredicted RBP11.62□□□□□ -0.55
CTDSP1-209ENST00000488627 PVALBP20472 110 aaPredicted RBP11.62□□□□□ -0.55
CTDSP1-209ENST00000488627 GALR1P47211 349 aa11.62□□□□□ -0.55
CTDSP1-209ENST00000488627 PSMB3P49720 205 aa11.62□□□□□ -0.55
CTDSP1-209ENST00000488627 SULT1A1P50225 295 aa11.62□□□□□ -0.55
CTDSP1-209ENST00000488627 H2BFSP57053 126 aa11.62□□□□□ -0.55
CTDSP1-209ENST00000488627 VWC2Q2TAL6 325 aa11.62□□□□□ -0.55
CTDSP1-209ENST00000488627 GDF5OSQ5U4N7 250 aa11.62□□□□□ -0.55
CTDSP1-209ENST00000488627 MORN3Q6PF18 240 aaPredicted RBP11.62□□□□□ -0.55
CTDSP1-209ENST00000488627 CSNK1G2-AS1Q8NCQ2 148 aa11.62□□□□□ -0.55
CTDSP1-209ENST00000488627 OR11H2Q8NH07 326 aa11.62□□□□□ -0.55
CTDSP1-209ENST00000488627 RARRES2Q99969 163 aa11.62□□□□□ -0.55
CTDSP1-209ENST00000488627 NMES1Q9C002 83 aa11.62□□□□□ -0.55
CTDSP1-209ENST00000488627 HIGD1AQ9Y241 93 aa11.62□□□□□ -0.55
CTDSP1-209ENST00000488627 AGRNO00468 2067 aa11.62□□□□□ -0.55
CTDSP1-209ENST00000488627 TENM2Q9NT68 2774 aa11.62□□□□□ -0.55
CTDSP1-209ENST00000488627 H0YIZ8 118 aa11.61□□□□□ -0.55
CTDSP1-209ENST00000488627 ISLRO14498 428 aa11.61□□□□□ -0.55
CTDSP1-209ENST00000488627 HLA-DRB4P13762 266 aa11.61□□□□□ -0.55
CTDSP1-209ENST00000488627 ID1P41134 155 aa11.61□□□□□ -0.55
CTDSP1-209ENST00000488627 RAP2BP61225 183 aa11.61□□□□□ -0.55
CTDSP1-209ENST00000488627 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.61□□□□□ -0.55
CTDSP1-209ENST00000488627 C20orf173Q96LM9 149 aa11.61□□□□□ -0.55
CTDSP1-209ENST00000488627 LINC00052Q96N35 136 aa11.61□□□□□ -0.55
CTDSP1-209ENST00000488627 GPR82Q96P67 336 aa11.61□□□□□ -0.55
CTDSP1-209ENST00000488627 UHRF2Q96PU4 802 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms