RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 TVP23BQ9NYZ1 205 aa0.7□□□□□ -2.3
CD46-215ENST00000488596 PYCARDQ9ULZ3 195 aa0.7□□□□□ -2.3
CD46-215ENST00000488596 TECTAO75443 2155 aa0.7□□□□□ -2.3
CD46-215ENST00000488596 MYH10P35580 1976 aa0.7□□□□□ -2.3
CD46-215ENST00000488596 TRBV19A0A075B6N1 114 aa0.69□□□□□ -2.3
CD46-215ENST00000488596 C7orf71A4D174 169 aa0.69□□□□□ -2.3
CD46-215ENST00000488596 G3V2T6 193 aa0.69□□□□□ -2.3
CD46-215ENST00000488596 GADD45GO95257 159 aa0.69□□□□□ -2.3
CD46-215ENST00000488596 IFNA1P01562 189 aa0.69□□□□□ -2.3
CD46-215ENST00000488596 IFNA7P01567 189 aa0.69□□□□□ -2.3
CD46-215ENST00000488596 ATP5G3P48201 142 aa0.69□□□□□ -2.3
CD46-215ENST00000488596 PIGPP57054 158 aa0.69□□□□□ -2.3
CD46-215ENST00000488596 VBP1P61758 197 aa0.69□□□□□ -2.3
CD46-215ENST00000488596 GNG3P63215 75 aa0.69□□□□□ -2.3
CD46-215ENST00000488596 LYRM7Q5U5X0 104 aa0.69□□□□□ -2.3
CD46-215ENST00000488596 TEX261Q6UWH6 196 aa0.69□□□□□ -2.3
CD46-215ENST00000488596 SLC30A7Q8NEW0 376 aa0.69□□□□□ -2.3
CD46-215ENST00000488596 OR13C6PQ8NH95 151 aa0.69□□□□□ -2.3
CD46-215ENST00000488596 NEK7Q8TDX7 302 aa0.69□□□□□ -2.3
CD46-215ENST00000488596 SELENOSQ9BQE4 189 aa0.69□□□□□ -2.3
CD46-215ENST00000488596 BCL2L10Q9HD36 194 aa0.69□□□□□ -2.3
CD46-215ENST00000488596 NHP2Q9NX24 153 aaKnown RBP0.69□□□□□ -2.3
CD46-215ENST00000488596 RASL12Q9NYN1 266 aa0.69□□□□□ -2.3
CD46-215ENST00000488596 SS18L2Q9UHA2 77 aa0.69□□□□□ -2.3
CD46-215ENST00000488596 U3KQ87 197 aa0.69□□□□□ -2.3
CD46-215ENST00000488596 LAMB4A4D0S4 1761 aa0.69□□□□□ -2.3
CD46-215ENST00000488596 FMN1Q68DA7 1419 aa0.69□□□□□ -2.3
CD46-215ENST00000488596 PEAK1Q9H792 1746 aa0.69□□□□□ -2.3
CD46-215ENST00000488596 ADGBQ8N7X0 1667 aa0.69□□□□□ -2.3
CD46-215ENST00000488596 SCN8AQ9UQD0 1980 aa0.68□□□□□ -2.3
CD46-215ENST00000488596 ZNF736B4DX44 427 aaPredicted RBP0.68□□□□□ -2.3
CD46-215ENST00000488596 BANF1O75531 89 aa0.68□□□□□ -2.3
CD46-215ENST00000488596 NDUFC2O95298 119 aa0.68□□□□□ -2.3
CD46-215ENST00000488596 C1QBP02746 253 aa0.68□□□□□ -2.3
CD46-215ENST00000488596 FABP1P07148 127 aa0.68□□□□□ -2.3
CD46-215ENST00000488596 RNASE4P34096 147 aaKnown RBP0.68□□□□□ -2.3
CD46-215ENST00000488596 TAS2R41P59536 307 aa0.68□□□□□ -2.3
CD46-215ENST00000488596 NCALDP61601 193 aa0.68□□□□□ -2.3
CD46-215ENST00000488596 DYNLT1P63172 113 aa0.68□□□□□ -2.3
CD46-215ENST00000488596 SPRNQ5BIV9 151 aa0.68□□□□□ -2.3
CD46-215ENST00000488596 GDF5OSQ5U4N7 250 aa0.68□□□□□ -2.3
CD46-215ENST00000488596 TRIQKQ629K1 86 aa0.68□□□□□ -2.3
CD46-215ENST00000488596 UHRF1BP1Q6BDS2 1440 aa0.68□□□□□ -2.3
CD46-215ENST00000488596 C3orf33Q6P1S2 294 aa0.68□□□□□ -2.3
CD46-215ENST00000488596 SOSTDC1Q6X4U4 206 aa0.68□□□□□ -2.3
CD46-215ENST00000488596 SMIM20Q8N5G0 67 aa0.68□□□□□ -2.3
CD46-215ENST00000488596 STAG3L4Q8TBR4 150 aa0.68□□□□□ -2.3
CD46-215ENST00000488596 PRADC1Q9BSG0 188 aa0.68□□□□□ -2.3
CD46-215ENST00000488596 PBDC1Q9BVG4 233 aa0.68□□□□□ -2.3
CD46-215ENST00000488596 TMEM133Q9H2Q1 129 aa0.68□□□□□ -2.3
CD46-215ENST00000488596 RNF122Q9H9V4 155 aa0.68□□□□□ -2.3
CD46-215ENST00000488596 MED29Q9NX70 200 aa0.68□□□□□ -2.3
CD46-215ENST00000488596 ATPIF1Q9UII2 106 aa0.68□□□□□ -2.3
CD46-215ENST00000488596 V9GYQ6 96 aa0.68□□□□□ -2.3
CD46-215ENST00000488596 NUP98P52948 1817 aa0.68□□□□□ -2.3
CD46-215ENST00000488596 PIK3C2AO00443 1686 aa0.68□□□□□ -2.3
CD46-215ENST00000488596 NCOA6Q14686 2063 aaPredicted RBP0.68□□□□□ -2.3
CD46-215ENST00000488596 N4BP2Q86UW6 1770 aaPredicted RBP0.68□□□□□ -2.3
CD46-215ENST00000488596 ZCCHC11Q5TAX3 1644 aaKnown RBP0.67□□□□□ -2.3
CD46-215ENST00000488596 NCAPD3P42695 1498 aa0.67□□□□□ -2.3
CD46-215ENST00000488596 CAMSAP2Q08AD1 1489 aa0.67□□□□□ -2.3
CD46-215ENST00000488596 MUC5BQ9HC84 5762 aaPredicted RBP0.67□□□□□ -2.3
CD46-215ENST00000488596 TNRC6AQ8NDV7 1962 aaKnown RBP0.67□□□□□ -2.3
CD46-215ENST00000488596 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.67□□□□□ -2.3
CD46-215ENST00000488596 H7C1C5 153 aa0.67□□□□□ -2.3
CD46-215ENST00000488596 PGRMC1O00264 195 aaKnown RBP0.67□□□□□ -2.3
CD46-215ENST00000488596 MFSD11O43934 449 aa0.67□□□□□ -2.3
CD46-215ENST00000488596 CST8O60676 142 aa0.67□□□□□ -2.3
CD46-215ENST00000488596 TIMM17BO60830 172 aa0.67□□□□□ -2.3
CD46-215ENST00000488596 ZNF25P17030 456 aaPredicted RBP0.67□□□□□ -2.3
CD46-215ENST00000488596 SERPINB1P30740 379 aa0.67□□□□□ -2.3
CD46-215ENST00000488596 PHBP35232 272 aa0.67□□□□□ -2.3
CD46-215ENST00000488596 TCTAP57738 103 aa0.67□□□□□ -2.3
CD46-215ENST00000488596 B2MP61769 119 aa0.67□□□□□ -2.3
CD46-215ENST00000488596 LCN6P62502 163 aa0.67□□□□□ -2.3
CD46-215ENST00000488596 GNG5P63218 68 aa0.67□□□□□ -2.3
CD46-215ENST00000488596 EIF5AP63241 154 aaKnown RBP0.67□□□□□ -2.3
CD46-215ENST00000488596 RRN3P1Q2M238 152 aa0.67□□□□□ -2.3
CD46-215ENST00000488596 Q8IYB0 196 aa0.67□□□□□ -2.3
CD46-215ENST00000488596 LINC00526Q96FQ7 95 aa0.67□□□□□ -2.3
CD46-215ENST00000488596 GPER1Q99527 375 aa0.67□□□□□ -2.3
CD46-215ENST00000488596 IMUPQ9GZP8 106 aa0.67□□□□□ -2.3
CD46-215ENST00000488596 PCBD2Q9H0N5 130 aa0.67□□□□□ -2.3
CD46-215ENST00000488596 SH3BGRL3Q9H299 93 aa0.67□□□□□ -2.3
CD46-215ENST00000488596 C14orf132Q9NPU4 83 aa0.67□□□□□ -2.3
CD46-215ENST00000488596 BIN3Q9NQY0 253 aa0.67□□□□□ -2.3
CD46-215ENST00000488596 LYRM2Q9NU23 88 aaPredicted RBP0.67□□□□□ -2.3
CD46-215ENST00000488596 PRNDQ9UKY0 176 aa0.67□□□□□ -2.3
CD46-215ENST00000488596 SSR3Q9UNL2 185 aa0.67□□□□□ -2.3
CD46-215ENST00000488596 ANKRD31Q8N7Z5 1873 aa0.67□□□□□ -2.3
CD46-215ENST00000488596 ADGRB2O60241 1585 aa0.66□□□□□ -2.3
CD46-215ENST00000488596 LAMA4Q16363 1823 aa0.66□□□□□ -2.3
CD46-215ENST00000488596 MYLKQ15746 1914 aa0.66□□□□□ -2.3
CD46-215ENST00000488596 YTHDC2Q9H6S0 1430 aaKnown RBP0.66□□□□□ -2.3
CD46-215ENST00000488596 A0A1B0GV72 72 aa0.66□□□□□ -2.3
CD46-215ENST00000488596 RIIAD1A6NNX1 92 aa0.66□□□□□ -2.3
CD46-215ENST00000488596 PPP5D1E7EU14 171 aa0.66□□□□□ -2.3
CD46-215ENST00000488596 M0R2N4 97 aa0.66□□□□□ -2.3
CD46-215ENST00000488596 AIPO00170 330 aa0.66□□□□□ -2.3
CD46-215ENST00000488596 TAX1BP3O14907 124 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms