RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 H3BP45 60 aa8.19□□□□□ -1.1
NIPAL3-207ENST00000488155 NDUFB6O95139 128 aa8.19□□□□□ -1.1
NIPAL3-207ENST00000488155 GDF5OSQ5U4N7 250 aa8.19□□□□□ -1.1
NIPAL3-207ENST00000488155 GGNBP1Q5YKI7 109 aa8.19□□□□□ -1.1
NIPAL3-207ENST00000488155 ZNF767PQ75MW2 155 aa8.19□□□□□ -1.1
NIPAL3-207ENST00000488155 NUDT15Q9NV35 164 aa8.19□□□□□ -1.1
NIPAL3-207ENST00000488155 X6R8D5 127 aa8.19□□□□□ -1.1
NIPAL3-207ENST00000488155 IGKV1OR2-108A0A075B7D4 117 aa8.18□□□□□ -1.1
NIPAL3-207ENST00000488155 ELOA3CA0A087WX78 387 aaPredicted RBP8.18□□□□□ -1.1
NIPAL3-207ENST00000488155 ZNF705EA8MWA4 302 aaPredicted RBP8.18□□□□□ -1.1
NIPAL3-207ENST00000488155 SNRPGP15A8MWD9 76 aa8.18□□□□□ -1.1
NIPAL3-207ENST00000488155 H3BMM0 161 aa8.18□□□□□ -1.1
NIPAL3-207ENST00000488155 SYNGR2O43760 224 aa8.18□□□□□ -1.1
NIPAL3-207ENST00000488155 MED6O75586 246 aa8.18□□□□□ -1.1
NIPAL3-207ENST00000488155 MIFP14174 115 aa8.18□□□□□ -1.1
NIPAL3-207ENST00000488155 GATA2P23769 480 aaPredicted RBP8.18□□□□□ -1.1
NIPAL3-207ENST00000488155 HLA-DMBP28068 263 aa8.18□□□□□ -1.1
NIPAL3-207ENST00000488155 TMEM41BQ5BJD5 291 aa8.18□□□□□ -1.1
NIPAL3-207ENST00000488155 SPANXN5Q5MJ07 72 aa8.18□□□□□ -1.1
NIPAL3-207ENST00000488155 LRTM2Q8N967 370 aa8.18□□□□□ -1.1
NIPAL3-207ENST00000488155 CSNK1G2-AS1Q8NCQ2 148 aa8.18□□□□□ -1.1
NIPAL3-207ENST00000488155 C2CD4CQ8TF44 421 aa8.18□□□□□ -1.1
NIPAL3-207ENST00000488155 MARVELD1Q9BSK0 173 aa8.18□□□□□ -1.1
NIPAL3-207ENST00000488155 C20orf85Q9H1P6 137 aa8.18□□□□□ -1.1
NIPAL3-207ENST00000488155 FLVCR2Q9UPI3 526 aa8.18□□□□□ -1.1
NIPAL3-207ENST00000488155 IGHV3OR16-12A0A075B7B8 117 aa8.17□□□□□ -1.1
NIPAL3-207ENST00000488155 A0A1B0GVG6 124 aa8.17□□□□□ -1.1
NIPAL3-207ENST00000488155 ADAP1O75689 374 aa8.17□□□□□ -1.1
NIPAL3-207ENST00000488155 ATP5IP56385 69 aaPredicted RBP8.17□□□□□ -1.1
NIPAL3-207ENST00000488155 LGALS9CQ6DKI2 356 aa8.17□□□□□ -1.1
NIPAL3-207ENST00000488155 OR8G2PQ6IF36 304 aa8.17□□□□□ -1.1
NIPAL3-207ENST00000488155 Q6ZTC4 211 aa8.17□□□□□ -1.1
NIPAL3-207ENST00000488155 OR8I2Q8N0Y5 310 aa8.17□□□□□ -1.1
NIPAL3-207ENST00000488155 TRGV9Q99603 122 aa8.17□□□□□ -1.1
NIPAL3-207ENST00000488155 GPN1Q9HCN4 374 aaPredicted RBP8.17□□□□□ -1.1
NIPAL3-207ENST00000488155 PFDN2Q9UHV9 154 aa8.17□□□□□ -1.1
NIPAL3-207ENST00000488155 CELA1Q9UNI1 258 aa8.17□□□□□ -1.1
NIPAL3-207ENST00000488155 TMED3Q9Y3Q3 217 aa8.17□□□□□ -1.1
NIPAL3-207ENST00000488155 PIGBOS1A0A0B4J2F0 54 aa8.16□□□□□ -1.1
NIPAL3-207ENST00000488155 F6UB75 175 aa8.16□□□□□ -1.1
NIPAL3-207ENST00000488155 FABP1P07148 127 aa8.16□□□□□ -1.1
NIPAL3-207ENST00000488155 SLC25A6P12236 298 aa8.16□□□□□ -1.1
NIPAL3-207ENST00000488155 HLA-DRB4P13762 266 aa8.16□□□□□ -1.1
NIPAL3-207ENST00000488155 ANXA7P20073 488 aaKnown RBP8.16□□□□□ -1.1
NIPAL3-207ENST00000488155 NUP62P37198 522 aaPredicted RBP8.16□□□□□ -1.1
NIPAL3-207ENST00000488155 NUTF2P61970 127 aaKnown RBP8.16□□□□□ -1.1
NIPAL3-207ENST00000488155 POLR2GP62487 172 aaKnown RBP eCLIP8.16□□□□□ -1.1
NIPAL3-207ENST00000488155 PRR20EP86478 221 aa8.16□□□□□ -1.1
NIPAL3-207ENST00000488155 PRR20CP86479 221 aa8.16□□□□□ -1.1
NIPAL3-207ENST00000488155 PRR20DP86480 221 aa8.16□□□□□ -1.1
NIPAL3-207ENST00000488155 PRR20BP86481 221 aa8.16□□□□□ -1.1
NIPAL3-207ENST00000488155 PRR20AP86496 221 aa8.16□□□□□ -1.1
NIPAL3-207ENST00000488155 AKR1C1Q04828 323 aa8.16□□□□□ -1.1
NIPAL3-207ENST00000488155 TMEM182Q6ZP80 229 aaPredicted RBP8.16□□□□□ -1.1
NIPAL3-207ENST00000488155 OR4B1Q8NGF8 309 aa8.16□□□□□ -1.1
NIPAL3-207ENST00000488155 COQ8AQ8NI60 647 aa8.16□□□□□ -1.1
NIPAL3-207ENST00000488155 FAM210AQ96ND0 272 aa8.16□□□□□ -1.1
NIPAL3-207ENST00000488155 CIB3Q96Q77 187 aaPredicted RBP8.16□□□□□ -1.1
NIPAL3-207ENST00000488155 SLC25A22Q9H936 323 aa8.16□□□□□ -1.1
NIPAL3-207ENST00000488155 SEPSECSQ9HD40 501 aaKnown RBP8.16□□□□□ -1.1
NIPAL3-207ENST00000488155 HLA-DRB4X5D2U9 266 aa8.16□□□□□ -1.1
NIPAL3-207ENST00000488155 C9orf170A2RU37 121 aa8.15□□□□□ -1.1
NIPAL3-207ENST00000488155 SMCO3A2RU48 225 aa8.15□□□□□ -1.1
NIPAL3-207ENST00000488155 PRAF2O60831 178 aa8.15□□□□□ -1.1
NIPAL3-207ENST00000488155 IL5P05113 134 aa8.15□□□□□ -1.1
NIPAL3-207ENST00000488155 ORM2P19652 201 aa8.15□□□□□ -1.1
NIPAL3-207ENST00000488155 ID1P41134 155 aa8.15□□□□□ -1.1
NIPAL3-207ENST00000488155 NKX2-1P43699 371 aaPredicted RBP8.15□□□□□ -1.1
NIPAL3-207ENST00000488155 EMP1P54849 157 aa8.15□□□□□ -1.1
NIPAL3-207ENST00000488155 RPP30P78346 268 aaKnown RBP8.15□□□□□ -1.1
NIPAL3-207ENST00000488155 THAP8Q8NA92 274 aa8.15□□□□□ -1.1
NIPAL3-207ENST00000488155 C1QTNF4Q9BXJ3 329 aa8.15□□□□□ -1.1
NIPAL3-207ENST00000488155 HRH4Q9H3N8 390 aa8.15□□□□□ -1.1
NIPAL3-207ENST00000488155 APLNQ9ULZ1 77 aa8.15□□□□□ -1.1
NIPAL3-207ENST00000488155 STRAPQ9Y3F4 350 aaKnown RBP8.15□□□□□ -1.1
NIPAL3-207ENST00000488155 ALG5Q9Y673 324 aa8.15□□□□□ -1.1
NIPAL3-207ENST00000488155 TRAV10A0A0B4J240 114 aa8.14□□□□□ -1.11
NIPAL3-207ENST00000488155 C11orf94C9JXX5 98 aa8.14□□□□□ -1.11
NIPAL3-207ENST00000488155 PRSS46E5RG02 174 aa8.14□□□□□ -1.11
NIPAL3-207ENST00000488155 SOCS3O14543 225 aa8.14□□□□□ -1.11
NIPAL3-207ENST00000488155 CCNKO75909 580 aa8.14□□□□□ -1.11
NIPAL3-207ENST00000488155 SCGB1D2O95969 90 aa8.14□□□□□ -1.11
NIPAL3-207ENST00000488155 C12orf74Q32Q52 190 aa8.14□□□□□ -1.11
NIPAL3-207ENST00000488155 ACOT7LQ6ZUV0 252 aa8.14□□□□□ -1.11
NIPAL3-207ENST00000488155 OR1B1Q8NGR6 318 aa8.14□□□□□ -1.11
NIPAL3-207ENST00000488155 C16orf92Q96LL3 132 aa8.14□□□□□ -1.11
NIPAL3-207ENST00000488155 C20orf173Q96LM9 149 aa8.14□□□□□ -1.11
NIPAL3-207ENST00000488155 RSG1Q9BU20 258 aa8.14□□□□□ -1.11
NIPAL3-207ENST00000488155 SCRT1Q9BWW7 348 aa8.14□□□□□ -1.11
NIPAL3-207ENST00000488155 SLC35B3Q9H1N7 401 aa8.14□□□□□ -1.11
NIPAL3-207ENST00000488155 SLC25A32Q9H2D1 315 aa8.14□□□□□ -1.11
NIPAL3-207ENST00000488155 SAV1Q9H4B6 383 aaPredicted RBP8.14□□□□□ -1.11
NIPAL3-207ENST00000488155 PSENENQ9NZ42 101 aa8.14□□□□□ -1.11
NIPAL3-207ENST00000488155 DOK5Q9P104 306 aa8.14□□□□□ -1.11
NIPAL3-207ENST00000488155 NACAE9PAV3 2078 aa8.14□□□□□ -1.11
NIPAL3-207ENST00000488155 IGHV4-4A0A075B6R2 117 aa8.13□□□□□ -1.11
NIPAL3-207ENST00000488155 ZNF98A6NK75 572 aa8.13□□□□□ -1.11
NIPAL3-207ENST00000488155 SSNA1O43805 119 aa8.13□□□□□ -1.11
NIPAL3-207ENST00000488155 SSSCA1O60232 199 aa8.13□□□□□ -1.11
NIPAL3-207ENST00000488155 OR4E1P0C645 316 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms