RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 CSMD1Q96PZ7 3565 aa11□□□□□ -0.65
COPS7B-221ENST00000488111 MED13LQ71F56 2210 aa11□□□□□ -0.65
COPS7B-221ENST00000488111 OR2T8A6NH00 312 aa10.99□□□□□ -0.65
COPS7B-221ENST00000488111 TMEM238C9JI98 176 aa10.99□□□□□ -0.65
COPS7B-221ENST00000488111 IBA57Q5T440 356 aaKnown RBP10.99□□□□□ -0.65
COPS7B-221ENST00000488111 OR52E5Q8NH55 327 aa10.99□□□□□ -0.65
COPS7B-221ENST00000488111 IGF2BP2-AS1Q96M15 143 aa10.99□□□□□ -0.65
COPS7B-221ENST00000488111 HSD17B10Q99714 261 aaKnown RBP10.99□□□□□ -0.65
COPS7B-221ENST00000488111 LINC00574Q9H8X3 128 aa10.99□□□□□ -0.65
COPS7B-221ENST00000488111 TNFRSF19Q9NS68 423 aa10.99□□□□□ -0.65
COPS7B-221ENST00000488111 ONECUT1Q9UBC0 465 aa10.99□□□□□ -0.65
COPS7B-221ENST00000488111 K7ERU9 68 aa10.99□□□□□ -0.65
COPS7B-221ENST00000488111 ARF6P62330 175 aa10.99□□□□□ -0.65
COPS7B-221ENST00000488111 DEFB113Q30KQ7 82 aa10.99□□□□□ -0.65
COPS7B-221ENST00000488111 SMIM12Q96EX1 92 aa10.99□□□□□ -0.65
COPS7B-221ENST00000488111 COMMD5Q9GZQ3 224 aa10.99□□□□□ -0.65
COPS7B-221ENST00000488111 RAB9BQ9NP90 201 aa10.99□□□□□ -0.65
COPS7B-221ENST00000488111 TMEM167BQ9NRX6 74 aa10.99□□□□□ -0.65
COPS7B-221ENST00000488111 MAP1AP78559 2803 aaPredicted RBP10.99□□□□□ -0.65
COPS7B-221ENST00000488111 VWC2LB2RUY7 222 aa10.98□□□□□ -0.65
COPS7B-221ENST00000488111 NDUFS8O00217 210 aa10.98□□□□□ -0.65
COPS7B-221ENST00000488111 LINC00205P59089 165 aa10.98□□□□□ -0.65
COPS7B-221ENST00000488111 CT45A1Q5HYN5 189 aa10.98□□□□□ -0.65
COPS7B-221ENST00000488111 PRR27Q6MZM9 219 aa10.98□□□□□ -0.65
COPS7B-221ENST00000488111 CT45A3Q8NHU0 189 aa10.98□□□□□ -0.65
COPS7B-221ENST00000488111 ZNF596Q8TC21 504 aa10.98□□□□□ -0.65
COPS7B-221ENST00000488111 HEYLQ9NQ87 328 aaPredicted RBP10.98□□□□□ -0.65
COPS7B-221ENST00000488111 APCP25054 2843 aa10.98□□□□□ -0.65
COPS7B-221ENST00000488111 CRXO43186 299 aaPredicted RBP10.98□□□□□ -0.65
COPS7B-221ENST00000488111 OR2J3O76001 311 aa10.98□□□□□ -0.65
COPS7B-221ENST00000488111 IGHV1-8P0DP01 117 aa10.98□□□□□ -0.65
COPS7B-221ENST00000488111 AMMECR1LQ6DCA0 310 aa10.98□□□□□ -0.65
COPS7B-221ENST00000488111 FAM71F2Q6NXP2 309 aa10.98□□□□□ -0.65
COPS7B-221ENST00000488111 KIR3DL3Q8N743 410 aa10.98□□□□□ -0.65
COPS7B-221ENST00000488111 LY6G5BQ8NDX9 201 aa10.98□□□□□ -0.65
COPS7B-221ENST00000488111 NUDT11Q96G61 164 aa10.98□□□□□ -0.65
COPS7B-221ENST00000488111 TMEM70Q9BUB7 260 aa10.98□□□□□ -0.65
COPS7B-221ENST00000488111 TP73-AS1Q9UF72 201 aa10.98□□□□□ -0.65
COPS7B-221ENST00000488111 WASHC3Q9Y3C0 194 aa10.98□□□□□ -0.65
COPS7B-221ENST00000488111 NUDT3O95989 172 aa10.97□□□□□ -0.65
COPS7B-221ENST00000488111 LIPFP07098 398 aa10.97□□□□□ -0.65
COPS7B-221ENST00000488111 NPY1RP25929 384 aa10.97□□□□□ -0.65
COPS7B-221ENST00000488111 REG1BP48304 166 aa10.97□□□□□ -0.65
COPS7B-221ENST00000488111 PRR20EP86478 221 aa10.97□□□□□ -0.65
COPS7B-221ENST00000488111 PRR20CP86479 221 aa10.97□□□□□ -0.65
COPS7B-221ENST00000488111 PRR20DP86480 221 aa10.97□□□□□ -0.65
COPS7B-221ENST00000488111 PRR20BP86481 221 aa10.97□□□□□ -0.65
COPS7B-221ENST00000488111 PRR20AP86496 221 aa10.97□□□□□ -0.65
COPS7B-221ENST00000488111 GDF5OSQ5U4N7 250 aa10.97□□□□□ -0.65
COPS7B-221ENST00000488111 TEPPQ6URK8 271 aa10.97□□□□□ -0.65
COPS7B-221ENST00000488111 MIR17HGQ75NE6 70 aa10.97□□□□□ -0.65
COPS7B-221ENST00000488111 C8orf46Q8TAG6 207 aa10.97□□□□□ -0.65
COPS7B-221ENST00000488111 ST6GALNAC6Q969X2 333 aa10.97□□□□□ -0.65
COPS7B-221ENST00000488111 OR4C46A6NHA9 309 aa10.97□□□□□ -0.65
COPS7B-221ENST00000488111 DUTP33316 252 aaKnown RBP10.97□□□□□ -0.65
COPS7B-221ENST00000488111 PSG5Q15238 335 aa10.97□□□□□ -0.65
COPS7B-221ENST00000488111 FAM120AOSQ5T036 256 aa10.97□□□□□ -0.65
COPS7B-221ENST00000488111 C12orf54Q6X4T0 127 aa10.97□□□□□ -0.65
COPS7B-221ENST00000488111 C1orf229Q6ZS94 237 aaPredicted RBP10.97□□□□□ -0.65
COPS7B-221ENST00000488111 MBD6Q96DN6 1003 aa10.97□□□□□ -0.65
COPS7B-221ENST00000488111 IFI27L2Q9H2X8 130 aa10.97□□□□□ -0.65
COPS7B-221ENST00000488111 SVEP1Q4LDE5 3571 aa10.97□□□□□ -0.65
COPS7B-221ENST00000488111 MUC21A0A0G2JKD1 596 aa10.96□□□□□ -0.65
COPS7B-221ENST00000488111 MUC21A0A140T8X8 626 aa10.96□□□□□ -0.65
COPS7B-221ENST00000488111 M0R1X1 148 aa10.96□□□□□ -0.65
COPS7B-221ENST00000488111 CD5LO43866 347 aa10.96□□□□□ -0.65
COPS7B-221ENST00000488111 PSG9Q00887 426 aa10.96□□□□□ -0.65
COPS7B-221ENST00000488111 RPL39P5Q59GN2 51 aa10.96□□□□□ -0.65
COPS7B-221ENST00000488111 MUC21Q5SSG8 566 aa10.96□□□□□ -0.65
COPS7B-221ENST00000488111 RNASEKQ6P5S7 137 aaKnown RBP10.96□□□□□ -0.65
COPS7B-221ENST00000488111 ABHD12Q8N2K0 398 aa10.96□□□□□ -0.65
COPS7B-221ENST00000488111 OR4A16Q8NH70 328 aa10.96□□□□□ -0.65
COPS7B-221ENST00000488111 SERTAD4Q9NUC0 356 aa10.96□□□□□ -0.65
COPS7B-221ENST00000488111 BEX4Q9NWD9 120 aaPredicted RBP10.96□□□□□ -0.65
COPS7B-221ENST00000488111 GGTLC3B5MD39 225 aa10.96□□□□□ -0.66
COPS7B-221ENST00000488111 PROP1O75360 226 aa10.96□□□□□ -0.66
COPS7B-221ENST00000488111 GPR12P47775 334 aa10.96□□□□□ -0.66
COPS7B-221ENST00000488111 SLC25A34Q6PIV7 304 aa10.96□□□□□ -0.66
COPS7B-221ENST00000488111 ZNF503Q96F45 646 aa10.96□□□□□ -0.66
COPS7B-221ENST00000488111 ANKRD17O75179 2603 aaKnown RBP10.96□□□□□ -0.66
COPS7B-221ENST00000488111 GAGE12BA1L429 117 aa10.95□□□□□ -0.66
COPS7B-221ENST00000488111 CIDEAO60543 219 aa10.95□□□□□ -0.66
COPS7B-221ENST00000488111 CA1P00915 261 aaPredicted RBP10.95□□□□□ -0.66
COPS7B-221ENST00000488111 HLA-DRB1P01911 266 aa10.95□□□□□ -0.66
COPS7B-221ENST00000488111 MGST1P10620 155 aaKnown RBP10.95□□□□□ -0.66
COPS7B-221ENST00000488111 COX7A1P24310 79 aa10.95□□□□□ -0.66
COPS7B-221ENST00000488111 S100A7P31151 101 aa10.95□□□□□ -0.66
COPS7B-221ENST00000488111 DSCR9P59020 149 aa10.95□□□□□ -0.66
COPS7B-221ENST00000488111 RPL8P62917 257 aaKnown RBP10.95□□□□□ -0.66
COPS7B-221ENST00000488111 RAB31Q13636 194 aa10.95□□□□□ -0.66
COPS7B-221ENST00000488111 NAV2Q8IVL1 2488 aa10.95□□□□□ -0.66
COPS7B-221ENST00000488111 MAPK1IP1LQ8NDC0 245 aa10.95□□□□□ -0.66
COPS7B-221ENST00000488111 URB1-AS1Q96HZ7 61 aa10.95□□□□□ -0.66
COPS7B-221ENST00000488111 CLEC5AQ9NY25 188 aa10.95□□□□□ -0.66
COPS7B-221ENST00000488111 FAM231DQ6ZW35 169 aa10.95□□□□□ -0.66
COPS7B-221ENST00000488111 TMEM133Q9H2Q1 129 aa10.95□□□□□ -0.66
COPS7B-221ENST00000488111 GATA2P23769 480 aaPredicted RBP10.94□□□□□ -0.66
COPS7B-221ENST00000488111 Q5PR19 223 aa10.94□□□□□ -0.66
COPS7B-221ENST00000488111 SLC25A48Q6ZT89 311 aaKnown RBP10.94□□□□□ -0.66
COPS7B-221ENST00000488111 TCF19Q9Y242 345 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms