RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 HSPB11Q9Y547 144 aa12.79□□□□□ -0.36
SHROOM1-205ENST00000488072 TRAV25A0A0B4J276 109 aa12.78□□□□□ -0.36
SHROOM1-205ENST00000488072 FGF7P21781 194 aa12.78□□□□□ -0.36
SHROOM1-205ENST00000488072 BAXQ07812 192 aa12.78□□□□□ -0.36
SHROOM1-205ENST00000488072 ODF3L2Q3SX64 289 aa12.78□□□□□ -0.36
SHROOM1-205ENST00000488072 LAMTOR1Q6IAA8 161 aa12.78□□□□□ -0.36
SHROOM1-205ENST00000488072 C17orf77Q96MU5 243 aa12.78□□□□□ -0.36
SHROOM1-205ENST00000488072 SCRT1Q9BWW7 348 aa12.78□□□□□ -0.36
SHROOM1-205ENST00000488072 GGTLC1Q9BX51 225 aa12.78□□□□□ -0.36
SHROOM1-205ENST00000488072 SLC25A31Q9H0C2 315 aa12.78□□□□□ -0.36
SHROOM1-205ENST00000488072 ARL6Q9H0F7 186 aa12.78□□□□□ -0.36
SHROOM1-205ENST00000488072 SMAD5-AS1Q9Y6J3 95 aa12.78□□□□□ -0.36
SHROOM1-205ENST00000488072 FRMD6-AS1P0C7T7 363 aa12.77□□□□□ -0.37
SHROOM1-205ENST00000488072 CAMLGP49069 296 aa12.77□□□□□ -0.37
SHROOM1-205ENST00000488072 GCSAMLQ5JQS6 135 aa12.77□□□□□ -0.37
SHROOM1-205ENST00000488072 MORN5Q5VZ52 161 aa12.77□□□□□ -0.37
SHROOM1-205ENST00000488072 Q6ZNX1 250 aa12.77□□□□□ -0.37
SHROOM1-205ENST00000488072 APRG1Q8IVJ8 170 aa12.77□□□□□ -0.37
SHROOM1-205ENST00000488072 STXBP6Q8NFX7 210 aa12.77□□□□□ -0.37
SHROOM1-205ENST00000488072 SPAG8Q99932 426 aaPredicted RBP12.77□□□□□ -0.37
SHROOM1-205ENST00000488072 HUWE1Q7Z6Z7 4374 aaKnown RBP12.77□□□□□ -0.37
SHROOM1-205ENST00000488072 hCG_2014768A0A024R1R8 64 aa12.76□□□□□ -0.37
SHROOM1-205ENST00000488072 OR11H12B2RN74 326 aa12.76□□□□□ -0.37
SHROOM1-205ENST00000488072 FABP1P07148 127 aa12.76□□□□□ -0.37
SHROOM1-205ENST00000488072 SNRPCP09234 159 aaKnown RBP12.76□□□□□ -0.37
SHROOM1-205ENST00000488072 PRB4P10163 310 aaPredicted RBP12.76□□□□□ -0.37
SHROOM1-205ENST00000488072 GTSCR1Q86UQ5 136 aa12.76□□□□□ -0.37
SHROOM1-205ENST00000488072 OR2T35Q8NGX2 323 aa12.76□□□□□ -0.37
SHROOM1-205ENST00000488072 PPP1R14BQ96C90 147 aa12.76□□□□□ -0.37
SHROOM1-205ENST00000488072 SLC25A32Q9H2D1 315 aa12.76□□□□□ -0.37
SHROOM1-205ENST00000488072 SLC25A22Q9H936 323 aa12.76□□□□□ -0.37
SHROOM1-205ENST00000488072 A0A1W2PS18 150 aa12.75□□□□□ -0.37
SHROOM1-205ENST00000488072 RBMY1BA6NDE4 496 aaKnown RBP12.75□□□□□ -0.37
SHROOM1-205ENST00000488072 RBMY1EA6NEQ0 496 aaKnown RBP12.75□□□□□ -0.37
SHROOM1-205ENST00000488072 ZNF98A6NK75 572 aa12.75□□□□□ -0.37
SHROOM1-205ENST00000488072 OR5G3P0C626 314 aa12.75□□□□□ -0.37
SHROOM1-205ENST00000488072 RBMY1DP0C7P1 496 aaKnown RBP12.75□□□□□ -0.37
SHROOM1-205ENST00000488072 DEFB1P60022 68 aa12.75□□□□□ -0.37
SHROOM1-205ENST00000488072 RAP2BP61225 183 aa12.75□□□□□ -0.37
SHROOM1-205ENST00000488072 HBG1P69891 147 aa12.75□□□□□ -0.37
SHROOM1-205ENST00000488072 HBG2P69892 147 aa12.75□□□□□ -0.37
SHROOM1-205ENST00000488072 OPCMLQ14982 345 aa12.75□□□□□ -0.37
SHROOM1-205ENST00000488072 ATP6V1FQ16864 119 aa12.75□□□□□ -0.37
SHROOM1-205ENST00000488072 SBSPONQ8IVN8 264 aa12.75□□□□□ -0.37
SHROOM1-205ENST00000488072 TMEM37Q8WXS4 190 aa12.75□□□□□ -0.37
SHROOM1-205ENST00000488072 FXYD6-FXYD2A0A087WZ82 144 aa12.74□□□□□ -0.37
SHROOM1-205ENST00000488072 TRAV5A0A0B4J249 113 aa12.74□□□□□ -0.37
SHROOM1-205ENST00000488072 A0A1B0GVG6 124 aa12.74□□□□□ -0.37
SHROOM1-205ENST00000488072 H3BRN7 92 aa12.74□□□□□ -0.37
SHROOM1-205ENST00000488072 HYPMO75409 117 aa12.74□□□□□ -0.37
SHROOM1-205ENST00000488072 PET100P0DJ07 73 aa12.74□□□□□ -0.37
SHROOM1-205ENST00000488072 PRR20EP86478 221 aa12.74□□□□□ -0.37
SHROOM1-205ENST00000488072 PRR20CP86479 221 aa12.74□□□□□ -0.37
SHROOM1-205ENST00000488072 PRR20DP86480 221 aa12.74□□□□□ -0.37
SHROOM1-205ENST00000488072 PRR20BP86481 221 aa12.74□□□□□ -0.37
SHROOM1-205ENST00000488072 PRR20AP86496 221 aa12.74□□□□□ -0.37
SHROOM1-205ENST00000488072 SIGLEC15Q6ZMC9 328 aa12.74□□□□□ -0.37
SHROOM1-205ENST00000488072 DCANP1Q8TF63 244 aa12.74□□□□□ -0.37
SHROOM1-205ENST00000488072 NARS2Q96I59 477 aaKnown RBP12.74□□□□□ -0.37
SHROOM1-205ENST00000488072 SLC25A39Q9BZJ4 359 aaPredicted RBP12.74□□□□□ -0.37
SHROOM1-205ENST00000488072 TMEM231Q9H6L2 316 aa12.74□□□□□ -0.37
SHROOM1-205ENST00000488072 SRD5A3Q9H8P0 318 aa12.74□□□□□ -0.37
SHROOM1-205ENST00000488072 FBXL17Q9UF56 701 aa12.74□□□□□ -0.37
SHROOM1-205ENST00000488072 HIGD1AQ9Y241 93 aa12.74□□□□□ -0.37
SHROOM1-205ENST00000488072 RNF222A6NCQ9 220 aa12.73□□□□□ -0.37
SHROOM1-205ENST00000488072 OR4C46A6NHA9 309 aa12.73□□□□□ -0.37
SHROOM1-205ENST00000488072 K7EQG2 157 aa12.73□□□□□ -0.37
SHROOM1-205ENST00000488072 DNASE2O00115 360 aaPredicted RBP12.73□□□□□ -0.37
SHROOM1-205ENST00000488072 EIF3GO75821 320 aaKnown RBP eCLIP12.73□□□□□ -0.37
SHROOM1-205ENST00000488072 PLP1P60201 277 aa12.73□□□□□ -0.37
SHROOM1-205ENST00000488072 SELENOTP62341 195 aa12.73□□□□□ -0.37
SHROOM1-205ENST00000488072 ZNF546Q86UE3 836 aa12.73□□□□□ -0.37
SHROOM1-205ENST00000488072 GRAMD2BQ96HH9 432 aa12.73□□□□□ -0.37
SHROOM1-205ENST00000488072 ATP5SQ99766 215 aa12.73□□□□□ -0.37
SHROOM1-205ENST00000488072 SHANK2-AS3Q9BTD1 123 aa12.73□□□□□ -0.37
SHROOM1-205ENST00000488072 RSG1Q9BU20 258 aa12.73□□□□□ -0.37
SHROOM1-205ENST00000488072 NPCDR1Q9BY65 106 aa12.73□□□□□ -0.37
SHROOM1-205ENST00000488072 WDR61Q9GZS3 305 aaKnown RBP12.73□□□□□ -0.37
SHROOM1-205ENST00000488072 ARV1Q9H2C2 271 aa12.73□□□□□ -0.37
SHROOM1-205ENST00000488072 MAP6D1Q9H9H5 199 aa12.73□□□□□ -0.37
SHROOM1-205ENST00000488072 PXMP4Q9Y6I8 212 aa12.73□□□□□ -0.37
SHROOM1-205ENST00000488072 ZNF688P0C7X2 276 aa12.72□□□□□ -0.37
SHROOM1-205ENST00000488072 BMI1P35226 326 aa12.72□□□□□ -0.37
SHROOM1-205ENST00000488072 AP2S1P53680 142 aaPredicted RBP12.72□□□□□ -0.37
SHROOM1-205ENST00000488072 DEFB131AP59861 70 aa12.72□□□□□ -0.37
SHROOM1-205ENST00000488072 SPATA31B1PQ5VZV4 182 aa12.72□□□□□ -0.37
SHROOM1-205ENST00000488072 IGFL4Q6B9Z1 124 aa12.72□□□□□ -0.37
SHROOM1-205ENST00000488072 OR11H4Q8NGC9 324 aa12.72□□□□□ -0.37
SHROOM1-205ENST00000488072 TUBA4BQ9H853 241 aa12.72□□□□□ -0.37
SHROOM1-205ENST00000488072 SLC39A9Q9NUM3 307 aa12.72□□□□□ -0.37
SHROOM1-205ENST00000488072 H3BTX0 84 aa12.71□□□□□ -0.37
SHROOM1-205ENST00000488072 CFDP00746 253 aaPredicted RBP12.71□□□□□ -0.37
SHROOM1-205ENST00000488072 OR8I2Q8N0Y5 310 aa12.71□□□□□ -0.37
SHROOM1-205ENST00000488072 B9D2Q9BPU9 175 aa12.71□□□□□ -0.37
SHROOM1-205ENST00000488072 TNFSF18Q9UNG2 199 aa12.71□□□□□ -0.37
SHROOM1-205ENST00000488072 HELTA6NFD8 242 aa12.7□□□□□ -0.38
SHROOM1-205ENST00000488072 KNCNA6PVL3 124 aa12.7□□□□□ -0.38
SHROOM1-205ENST00000488072 COX7A2P2O60397 106 aa12.7□□□□□ -0.38
SHROOM1-205ENST00000488072 RPL35AP18077 110 aaKnown RBP12.7□□□□□ -0.38
SHROOM1-205ENST00000488072 RPL29P47914 159 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms