RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 ZNF266Q14584 549 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 SURF2Q15527 256 aaPredicted RBP2.34□□□□□ -2.03
GPNMB-212ENST00000487890 LTC4SQ16873 150 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 C4orf26Q17RF5 130 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 SAMD13Q5VXD3 122 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 C12orf73Q69YU5 71 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 HCP5Q6MZN7 132 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 TEX43Q6ZNM6 134 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 Q8IYB0 196 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 ZNF485Q8NCK3 441 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 DUSP18Q8NEJ0 188 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 OR4S1Q8NGB4 309 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 CASTOR1Q8WTX7 329 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 PP6455Q8WZ26 134 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 IL22RA2Q969J5 263 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 TMEM230Q96A57 120 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 ADAT3Q96EY9 351 aaPredicted RBP2.34□□□□□ -2.03
GPNMB-212ENST00000487890 TMEM101Q96IK0 257 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 ZNF714Q96N38 554 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 GPER1Q99527 375 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 TCEAL7Q9BRU2 100 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 MND1Q9BWT6 205 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 CHST5Q9GZS9 411 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 NXF2Q9GZY0 626 aaKnown RBP2.34□□□□□ -2.03
GPNMB-212ENST00000487890 GABARAPL1Q9H0R8 117 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 MAP1LC3AQ9H492 121 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 C16orf95Q9H693 158 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 EXOSC4Q9NPD3 245 aaKnown RBP2.34□□□□□ -2.03
GPNMB-212ENST00000487890 ZNF222Q9UK12 451 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 V9GYS6 101 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 TENM3Q9P273 2699 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 IGKV1-27A0A075B6S5 117 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 IGHV2-26A0A0B4J1V2 119 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 TMEM212A6NML5 194 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 ANKRD65E5RJM6 399 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 PEX7O00628 323 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 DEGS1O15121 323 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 CYB5BO43169 146 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 SRSF10O75494 262 aaKnown RBP2.33□□□□□ -2.04
GPNMB-212ENST00000487890 SULT1C4O75897 302 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 OR2H2O95918 312 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 HPRT1P00492 218 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 IFNA10P01566 189 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 IGLV3-1P01715 115 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 IGHV3-7P01780 117 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 IFNA4P05014 189 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 IGHV1-8P0DP01 117 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 CD28P10747 220 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 ESDP10768 282 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 CCL1P22362 96 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 CDK2P24941 298 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 CD24P25063 80 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 HTR1DP28221 377 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 RPL12P30050 165 aaKnown RBP2.33□□□□□ -2.04
GPNMB-212ENST00000487890 PPP3R1P63098 170 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 ZNF616Q08AN1 781 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 PPP1R1AQ13522 171 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 HES1Q14469 280 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 RSU1Q15404 277 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 TMEM244Q5VVB8 128 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 ZNF493Q6ZR52 646 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 MRPL55Q7Z7F7 128 aaKnown RBP2.33□□□□□ -2.04
GPNMB-212ENST00000487890 DYNAPQ8N1N2 210 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 CBR4Q8N4T8 237 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 ACBD7Q8N6N7 88 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 NPBQ8NG41 125 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 OR51A4Q8NGJ6 313 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 OR1P1Q8NH06 330 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 OR10AC1Q8NH08 325 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 CYGBQ8WWM9 190 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 SCGB3A2Q96PL1 93 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 SIGMAR1Q99720 223 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 PDCD1LG2Q9BQ51 273 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 HES4Q9HCC6 221 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 NIT2Q9NQR4 276 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 BIN3Q9NQY0 253 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 PSG8Q9UQ74 426 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 RBM7Q9Y580 266 aaKnown RBP2.33□□□□□ -2.04
GPNMB-212ENST00000487890 LINC00312Q9Y6C7 94 aa2.33□□□□□ -2.04
GPNMB-212ENST00000487890 STAB2Q8WWQ8 2551 aa2.32□□□□□ -2.04
GPNMB-212ENST00000487890 MEIKINA0A087WXM9 373 aa2.32□□□□□ -2.04
GPNMB-212ENST00000487890 IGKV1-9A0A0C4DH69 117 aa2.32□□□□□ -2.04
GPNMB-212ENST00000487890 PNMA8CA0A1B0GUJ8 204 aa2.32□□□□□ -2.04
GPNMB-212ENST00000487890 TCRBV4S1A1TA0A5B7 111 aa2.32□□□□□ -2.04
GPNMB-212ENST00000487890 ODAMA1E959 279 aa2.32□□□□□ -2.04
GPNMB-212ENST00000487890 A6NDN8 102 aa2.32□□□□□ -2.04
GPNMB-212ENST00000487890 A6NDX4 124 aa2.32□□□□□ -2.04
GPNMB-212ENST00000487890 OR4C45A6NMZ5 311 aa2.32□□□□□ -2.04
GPNMB-212ENST00000487890 C17orf98A8MV24 154 aa2.32□□□□□ -2.04
GPNMB-212ENST00000487890 ODF3BA8MYP8 253 aa2.32□□□□□ -2.04
GPNMB-212ENST00000487890 C15orf65H3BRN8 121 aa2.32□□□□□ -2.04
GPNMB-212ENST00000487890 SLC22A1O15245 554 aa2.32□□□□□ -2.04
GPNMB-212ENST00000487890 PIN1P1O15428 100 aa2.32□□□□□ -2.04
GPNMB-212ENST00000487890 SSNA1O43805 119 aa2.32□□□□□ -2.04
GPNMB-212ENST00000487890 PDE6DO43924 150 aa2.32□□□□□ -2.04
GPNMB-212ENST00000487890 ZNF737O75373 536 aa2.32□□□□□ -2.04
GPNMB-212ENST00000487890 CDRT1O95170 752 aa2.32□□□□□ -2.04
GPNMB-212ENST00000487890 IFNA1P01562 189 aa2.32□□□□□ -2.04
GPNMB-212ENST00000487890 RBP4P02753 201 aa2.32□□□□□ -2.04
GPNMB-212ENST00000487890 S100A8P05109 93 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms