RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 A0A1B0GW15 77 aa2.93□□□□□ -1.94
BRCA1-217ENST00000487825 OR2T8A6NH00 312 aa2.93□□□□□ -1.94
BRCA1-217ENST00000487825 F5H768 121 aa2.93□□□□□ -1.94
BRCA1-217ENST00000487825 H3BN98 237 aa2.93□□□□□ -1.94
BRCA1-217ENST00000487825 DNASE2O00115 360 aaPredicted RBP2.93□□□□□ -1.94
BRCA1-217ENST00000487825 TNFRSF11BO00300 401 aa2.93□□□□□ -1.94
BRCA1-217ENST00000487825 SULT1C4O75897 302 aa2.93□□□□□ -1.94
BRCA1-217ENST00000487825 CDRT1O95170 752 aa2.93□□□□□ -1.94
BRCA1-217ENST00000487825 HMGN1P05114 100 aa2.93□□□□□ -1.94
BRCA1-217ENST00000487825 FABP3P05413 133 aa2.93□□□□□ -1.94
BRCA1-217ENST00000487825 CTXN2P0C2S0 81 aa2.93□□□□□ -1.94
BRCA1-217ENST00000487825 SERPINA2P20848 420 aa2.93□□□□□ -1.94
BRCA1-217ENST00000487825 ATP6V1B2P21281 511 aa2.93□□□□□ -1.94
BRCA1-217ENST00000487825 PSMD7P51665 324 aa2.93□□□□□ -1.94
BRCA1-217ENST00000487825 MAGOHP61326 146 aaKnown RBP2.93□□□□□ -1.94
BRCA1-217ENST00000487825 NUTF2P61970 127 aaKnown RBP2.93□□□□□ -1.94
BRCA1-217ENST00000487825 S100A12P80511 92 aa2.93□□□□□ -1.94
BRCA1-217ENST00000487825 CDK10Q15131 360 aa2.93□□□□□ -1.94
BRCA1-217ENST00000487825 ATP6AP1Q15904 470 aa2.93□□□□□ -1.94
BRCA1-217ENST00000487825 ESRGQ1W209 222 aa2.93□□□□□ -1.94
BRCA1-217ENST00000487825 C5orf47Q569G3 176 aa2.93□□□□□ -1.94
BRCA1-217ENST00000487825 ACTL10Q5JWF8 245 aa2.93□□□□□ -1.94
BRCA1-217ENST00000487825 THOC7Q6I9Y2 204 aaKnown RBP2.93□□□□□ -1.94
BRCA1-217ENST00000487825 CBR4Q8N4T8 237 aa2.93□□□□□ -1.94
BRCA1-217ENST00000487825 SAMD12Q8N8I0 201 aa2.93□□□□□ -1.94
BRCA1-217ENST00000487825 IL1F10Q8WWZ1 152 aa2.93□□□□□ -1.94
BRCA1-217ENST00000487825 PYURFQ96I23 114 aa2.93□□□□□ -1.94
BRCA1-217ENST00000487825 OR10C1Q96KK4 312 aa2.93□□□□□ -1.94
BRCA1-217ENST00000487825 IL4I1Q96RQ9 567 aa2.93□□□□□ -1.94
BRCA1-217ENST00000487825 NIPSNAP1Q9BPW8 284 aa2.93□□□□□ -1.94
BRCA1-217ENST00000487825 C7orf50Q9BRJ6 194 aaKnown RBP2.93□□□□□ -1.94
BRCA1-217ENST00000487825 METTL9Q9H1A3 318 aa2.93□□□□□ -1.94
BRCA1-217ENST00000487825 S100A14Q9HCY8 104 aa2.93□□□□□ -1.94
BRCA1-217ENST00000487825 LRRC42Q9Y546 428 aa2.93□□□□□ -1.94
BRCA1-217ENST00000487825 FABP12A6NFH5 140 aa2.92□□□□□ -1.94
BRCA1-217ENST00000487825 METTL15A6NJ78 407 aa2.92□□□□□ -1.94
BRCA1-217ENST00000487825 E7EUB6 86 aa2.92□□□□□ -1.94
BRCA1-217ENST00000487825 M0R1X1 148 aa2.92□□□□□ -1.94
BRCA1-217ENST00000487825 NUPL2O15504 423 aaKnown RBP2.92□□□□□ -1.94
BRCA1-217ENST00000487825 SAA1P0DJI8 122 aaPredicted RBP2.92□□□□□ -1.94
BRCA1-217ENST00000487825 GTF2F2P13984 249 aa2.92□□□□□ -1.94
BRCA1-217ENST00000487825 GTF2A1P52655 376 aaPredicted RBP2.92□□□□□ -1.94
BRCA1-217ENST00000487825 OR2B8PP59922 312 aa2.92□□□□□ -1.94
BRCA1-217ENST00000487825 CDK5Q00535 292 aa2.92□□□□□ -1.94
BRCA1-217ENST00000487825 GINS1Q14691 196 aa2.92□□□□□ -1.94
BRCA1-217ENST00000487825 MEF2DQ14814 521 aa2.92□□□□□ -1.94
BRCA1-217ENST00000487825 MRPL23Q16540 153 aaKnown RBP2.92□□□□□ -1.94
BRCA1-217ENST00000487825 RTL8BQ17RB0 113 aa2.92□□□□□ -1.94
BRCA1-217ENST00000487825 OGFRL1Q5TC84 451 aaPredicted RBP2.92□□□□□ -1.94
BRCA1-217ENST00000487825 GLYATQ6IB77 296 aa2.92□□□□□ -1.94
BRCA1-217ENST00000487825 Q6ZRU5 148 aa2.92□□□□□ -1.94
BRCA1-217ENST00000487825 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.92□□□□□ -1.94
BRCA1-217ENST00000487825 OR51A2Q8NGJ7 313 aa2.92□□□□□ -1.94
BRCA1-217ENST00000487825 OR2G2Q8NGZ5 317 aa2.92□□□□□ -1.94
BRCA1-217ENST00000487825 VN1R17PQ8TDU5 208 aa2.92□□□□□ -1.94
BRCA1-217ENST00000487825 PTX4Q96A99 478 aa2.92□□□□□ -1.94
BRCA1-217ENST00000487825 DGCR14Q96DF8 476 aaKnown RBP2.92□□□□□ -1.94
BRCA1-217ENST00000487825 GPER1Q99527 375 aa2.92□□□□□ -1.94
BRCA1-217ENST00000487825 MAP1LC3CQ9BXW4 147 aa2.92□□□□□ -1.94
BRCA1-217ENST00000487825 SRRQ9GZT4 340 aa2.92□□□□□ -1.94
BRCA1-217ENST00000487825 VSIRQ9H7M9 311 aa2.92□□□□□ -1.94
BRCA1-217ENST00000487825 ISG20L2Q9H9L3 353 aaKnown RBP2.92□□□□□ -1.94
BRCA1-217ENST00000487825 C8orf4Q9NR00 106 aa2.92□□□□□ -1.94
BRCA1-217ENST00000487825 PAK1IP1Q9NWT1 392 aaPredicted RBP2.92□□□□□ -1.94
BRCA1-217ENST00000487825 ABRACLQ9P1F3 81 aa2.92□□□□□ -1.94
BRCA1-217ENST00000487825 DIMT1Q9UNQ2 313 aaKnown RBP2.92□□□□□ -1.94
BRCA1-217ENST00000487825 PEX16Q9Y5Y5 336 aa2.92□□□□□ -1.94
BRCA1-217ENST00000487825 URGCP-MRPS24S4R325 110 aa2.92□□□□□ -1.94
BRCA1-217ENST00000487825 IGHV3OR16-12A0A075B7B8 117 aa2.91□□□□□ -1.94
BRCA1-217ENST00000487825 IGHV3OR16-13A0A075B7E8 117 aa2.91□□□□□ -1.94
BRCA1-217ENST00000487825 TRAV14DV4A0A0A6YYC5 116 aa2.91□□□□□ -1.94
BRCA1-217ENST00000487825 IGHV3-74A0A0B4J1X5 117 aa2.91□□□□□ -1.94
BRCA1-217ENST00000487825 TRAV3A0A0B4J244 114 aa2.91□□□□□ -1.94
BRCA1-217ENST00000487825 LOC105371267A0A1B0GV96 52 aa2.91□□□□□ -1.94
BRCA1-217ENST00000487825 A0A1W2PQL4 384 aaPredicted RBP2.91□□□□□ -1.94
BRCA1-217ENST00000487825 LRCOL1A6NCL2 159 aa2.91□□□□□ -1.94
BRCA1-217ENST00000487825 LYRM9A8MSI8 78 aa2.91□□□□□ -1.94
BRCA1-217ENST00000487825 SIVA1O15304 175 aa2.91□□□□□ -1.94
BRCA1-217ENST00000487825 ZNF780AO75290 641 aaPredicted RBP2.91□□□□□ -1.94
BRCA1-217ENST00000487825 IGLV2-8P01709 118 aa2.91□□□□□ -1.94
BRCA1-217ENST00000487825 HBE1P02100 147 aa2.91□□□□□ -1.94
BRCA1-217ENST00000487825 ATP5G1P05496 136 aa2.91□□□□□ -1.94
BRCA1-217ENST00000487825 CD3GP09693 182 aa2.91□□□□□ -1.94
BRCA1-217ENST00000487825 ZNF688P0C7X2 276 aa2.91□□□□□ -1.94
BRCA1-217ENST00000487825 DEFA4P12838 97 aa2.91□□□□□ -1.94
BRCA1-217ENST00000487825 RPL27AP46776 148 aaKnown RBP2.91□□□□□ -1.94
BRCA1-217ENST00000487825 P2RY1P47900 373 aa2.91□□□□□ -1.94
BRCA1-217ENST00000487825 ATP5G3P48201 142 aa2.91□□□□□ -1.94
BRCA1-217ENST00000487825 RPL37AP61513 92 aaKnown RBP2.91□□□□□ -1.94
BRCA1-217ENST00000487825 GPR107Q5VW38 600 aa2.91□□□□□ -1.94
BRCA1-217ENST00000487825 OR10K2Q6IF99 312 aa2.91□□□□□ -1.94
BRCA1-217ENST00000487825 TMPRSS11AQ6ZMR5 421 aa2.91□□□□□ -1.94
BRCA1-217ENST00000487825 SYS1Q8N2H4 156 aa2.91□□□□□ -1.94
BRCA1-217ENST00000487825 Q8N814 137 aa2.91□□□□□ -1.94
BRCA1-217ENST00000487825 DUSP18Q8NEJ0 188 aa2.91□□□□□ -1.94
BRCA1-217ENST00000487825 OR5D14Q8NGL3 314 aa2.91□□□□□ -1.94
BRCA1-217ENST00000487825 OR4A4PQ8NGN8 299 aa2.91□□□□□ -1.94
BRCA1-217ENST00000487825 DCANP1Q8TF63 244 aa2.91□□□□□ -1.94
BRCA1-217ENST00000487825 TBX5Q99593 518 aa2.91□□□□□ -1.94
BRCA1-217ENST00000487825 OR1A1Q9P1Q5 309 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms