RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 PDZD9Q8IXQ8 264 aa0.31□□□□□ -2.36
CCDC66-221ENST00000487739 ITFG2Q969R8 447 aa0.31□□□□□ -2.36
CCDC66-221ENST00000487739 DOCK4Q8N1I0 1966 aa0.31□□□□□ -2.36
CCDC66-221ENST00000487739 UBR2Q8IWV8 1755 aa0.31□□□□□ -2.36
CCDC66-221ENST00000487739 ARHGEF11O15085 1522 aa0.3□□□□□ -2.36
CCDC66-221ENST00000487739 TRAV4A0A0B4J268 109 aa0.3□□□□□ -2.36
CCDC66-221ENST00000487739 IGHV1-58A0A0C4DH39 117 aa0.3□□□□□ -2.36
CCDC66-221ENST00000487739 A0A1W2PPM0 123 aa0.3□□□□□ -2.36
CCDC66-221ENST00000487739 B4DSR2 109 aa0.3□□□□□ -2.36
CCDC66-221ENST00000487739 J3QRK9 145 aa0.3□□□□□ -2.36
CCDC66-221ENST00000487739 CDKN2CP42773 168 aa0.3□□□□□ -2.36
CCDC66-221ENST00000487739 KRR1Q13601 381 aaKnown RBP0.3□□□□□ -2.36
CCDC66-221ENST00000487739 LYRM7Q5U5X0 104 aa0.3□□□□□ -2.36
CCDC66-221ENST00000487739 SPATA8Q6RVD6 105 aa0.3□□□□□ -2.36
CCDC66-221ENST00000487739 LINC00052Q96N35 136 aa0.3□□□□□ -2.36
CCDC66-221ENST00000487739 GPER1Q99527 375 aa0.3□□□□□ -2.36
CCDC66-221ENST00000487739 SIGMAR1Q99720 223 aa0.3□□□□□ -2.36
CCDC66-221ENST00000487739 TMEM126AQ9H061 195 aa0.3□□□□□ -2.36
CCDC66-221ENST00000487739 RNF122Q9H9V4 155 aa0.3□□□□□ -2.36
CCDC66-221ENST00000487739 ORMDL1Q9P0S3 153 aa0.3□□□□□ -2.36
CCDC66-221ENST00000487739 MGAMO43451 1857 aa0.3□□□□□ -2.36
CCDC66-221ENST00000487739 TMEM114B3SHH9 223 aa0.29□□□□□ -2.36
CCDC66-221ENST00000487739 NDUFB3O43676 98 aa0.29□□□□□ -2.36
CCDC66-221ENST00000487739 HAND1O96004 215 aa0.29□□□□□ -2.36
CCDC66-221ENST00000487739 ERP29P30040 261 aaKnown RBP0.29□□□□□ -2.36
CCDC66-221ENST00000487739 HOXA6P31267 233 aa0.29□□□□□ -2.36
CCDC66-221ENST00000487739 ATP5G3P48201 142 aa0.29□□□□□ -2.36
CCDC66-221ENST00000487739 PLPP5Q8NEB5 264 aa0.29□□□□□ -2.36
CCDC66-221ENST00000487739 C10orf95Q9H7T3 257 aa0.29□□□□□ -2.36
CCDC66-221ENST00000487739 PSTPIP2Q9H939 334 aa0.29□□□□□ -2.36
CCDC66-221ENST00000487739 PCTPQ9UKL6 214 aa0.29□□□□□ -2.36
CCDC66-221ENST00000487739 TNS3Q68CZ2 1445 aa0.29□□□□□ -2.36
CCDC66-221ENST00000487739 CECR2Q9BXF3 1484 aa0.29□□□□□ -2.36
CCDC66-221ENST00000487739 UNC13CQ8NB66 2214 aa0.28□□□□□ -2.36
CCDC66-221ENST00000487739 N4BP2Q86UW6 1770 aaPredicted RBP0.28□□□□□ -2.36
CCDC66-221ENST00000487739 TRAV10A0A0B4J240 114 aa0.28□□□□□ -2.36
CCDC66-221ENST00000487739 NUPR1O60356 82 aa0.28□□□□□ -2.36
CCDC66-221ENST00000487739 OR7C1O76099 320 aaPredicted RBP0.28□□□□□ -2.36
CCDC66-221ENST00000487739 ROMO1P60602 79 aa0.28□□□□□ -2.36
CCDC66-221ENST00000487739 RRN3P1Q2M238 152 aa0.28□□□□□ -2.36
CCDC66-221ENST00000487739 ZNF833PQ6ZTB9 187 aa0.28□□□□□ -2.36
CCDC66-221ENST00000487739 OR5D14Q8NGL3 314 aa0.28□□□□□ -2.36
CCDC66-221ENST00000487739 OR10K1Q8NGX5 313 aa0.28□□□□□ -2.36
CCDC66-221ENST00000487739 PRAP1Q96NZ9 151 aa0.28□□□□□ -2.36
CCDC66-221ENST00000487739 TP53RKQ96S44 253 aa0.28□□□□□ -2.36
CCDC66-221ENST00000487739 KIFC1Q9BW19 673 aa0.28□□□□□ -2.36
CCDC66-221ENST00000487739 MED12Q93074 2177 aa0.28□□□□□ -2.37
CCDC66-221ENST00000487739 TRGV10A0A0A0MS01 117 aa0.27□□□□□ -2.37
CCDC66-221ENST00000487739 TAX1BP3O14907 124 aa0.27□□□□□ -2.37
CCDC66-221ENST00000487739 CST8O60676 142 aa0.27□□□□□ -2.37
CCDC66-221ENST00000487739 CCL7P80098 99 aa0.27□□□□□ -2.37
CCDC66-221ENST00000487739 RGS21Q2M5E4 152 aa0.27□□□□□ -2.37
CCDC66-221ENST00000487739 C22orf39Q6P5X5 142 aa0.27□□□□□ -2.37
CCDC66-221ENST00000487739 KRTAP26-1Q6PEX3 210 aa0.27□□□□□ -2.37
CCDC66-221ENST00000487739 C2orf82Q6UX34 121 aa0.27□□□□□ -2.37
CCDC66-221ENST00000487739 C4orf22Q6V702 233 aa0.27□□□□□ -2.37
CCDC66-221ENST00000487739 OR11H6Q8NGC7 330 aa0.27□□□□□ -2.37
CCDC66-221ENST00000487739 Q8TAT8 98 aa0.27□□□□□ -2.37
CCDC66-221ENST00000487739 GNPDA2Q8TDQ7 276 aa0.27□□□□□ -2.37
CCDC66-221ENST00000487739 SLC25A21Q9BQT8 299 aaPredicted RBP0.27□□□□□ -2.37
CCDC66-221ENST00000487739 LINC00467Q9BRT7 94 aa0.27□□□□□ -2.37
CCDC66-221ENST00000487739 ENY2Q9NPA8 101 aa0.27□□□□□ -2.37
CCDC66-221ENST00000487739 FAM32AQ9Y421 112 aaKnown RBP0.27□□□□□ -2.37
CCDC66-221ENST00000487739 FMN1Q68DA7 1419 aa0.27□□□□□ -2.37
CCDC66-221ENST00000487739 PCF11O94913 1555 aaKnown RBP0.27□□□□□ -2.37
CCDC66-221ENST00000487739 TRBV19A0A075B6N1 114 aa0.26□□□□□ -2.37
CCDC66-221ENST00000487739 A8MWV9 139 aa0.26□□□□□ -2.37
CCDC66-221ENST00000487739 HMGB3O15347 200 aaKnown RBP0.26□□□□□ -2.37
CCDC66-221ENST00000487739 BCL2L15Q5TBC7 163 aa0.26□□□□□ -2.37
CCDC66-221ENST00000487739 HAGHLQ6PII5 290 aaPredicted RBP0.26□□□□□ -2.37
CCDC66-221ENST00000487739 YPEL2Q96QA6 119 aa0.26□□□□□ -2.37
CCDC66-221ENST00000487739 TNFSF18Q9UNG2 199 aa0.26□□□□□ -2.37
CCDC66-221ENST00000487739 SLC22A13Q9Y226 551 aa0.26□□□□□ -2.37
CCDC66-221ENST00000487739 LY96Q9Y6Y9 160 aa0.26□□□□□ -2.37
CCDC66-221ENST00000487739 KDM6AO15550 1401 aaPredicted RBP0.26□□□□□ -2.37
CCDC66-221ENST00000487739 TET1Q8NFU7 2136 aa0.26□□□□□ -2.37
CCDC66-221ENST00000487739 ASCC3Q8N3C0 2202 aaKnown RBP0.25□□□□□ -2.37
CCDC66-221ENST00000487739 PTPRDP23468 1912 aa0.25□□□□□ -2.37
CCDC66-221ENST00000487739 COL24A1Q17RW2 1714 aa0.25□□□□□ -2.37
CCDC66-221ENST00000487739 FRAS1Q86XX4 4008 aa0.25□□□□□ -2.37
CCDC66-221ENST00000487739 FAM159BA6NKW6 160 aa0.25□□□□□ -2.37
CCDC66-221ENST00000487739 F8W1H4 67 aa0.25□□□□□ -2.37
CCDC66-221ENST00000487739 H3BRM9 83 aa0.25□□□□□ -2.37
CCDC66-221ENST00000487739 TMEM256-PLSCR3K7ERE1 68 aa0.25□□□□□ -2.37
CCDC66-221ENST00000487739 M0R378 163 aa0.25□□□□□ -2.37
CCDC66-221ENST00000487739 ERC2-IT1O76042 136 aa0.25□□□□□ -2.37
CCDC66-221ENST00000487739 PRH1P02810 166 aa0.25□□□□□ -2.37
CCDC66-221ENST00000487739 DSCR4P56555 118 aaPredicted RBP0.25□□□□□ -2.37
CCDC66-221ENST00000487739 UBE2BP63146 152 aa0.25□□□□□ -2.37
CCDC66-221ENST00000487739 LIN52Q52LA3 116 aa0.25□□□□□ -2.37
CCDC66-221ENST00000487739 C1orf134Q5TEV5 83 aa0.25□□□□□ -2.37
CCDC66-221ENST00000487739 GRINAQ7Z429 371 aa0.25□□□□□ -2.37
CCDC66-221ENST00000487739 BTF3L4Q96K17 158 aa0.25□□□□□ -2.37
CCDC66-221ENST00000487739 GGACTQ9BVM4 153 aa0.25□□□□□ -2.37
CCDC66-221ENST00000487739 PARVBQ9HBI1 364 aa0.25□□□□□ -2.37
CCDC66-221ENST00000487739 E7EUB6 86 aa0.24□□□□□ -2.37
CCDC66-221ENST00000487739 IGLV1-51P01701 117 aa0.24□□□□□ -2.37
CCDC66-221ENST00000487739 IGLV3-1P01715 115 aa0.24□□□□□ -2.37
CCDC66-221ENST00000487739 CYBAP13498 195 aa0.24□□□□□ -2.37
CCDC66-221ENST00000487739 ERVS71-1P61550 626 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms