RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 FAM236DA0A1B0GTK5 79 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 A0A1W2PP18 115 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 A6NDX4 124 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 EFCAB10A6NFE3 127 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 M0QZK8 103 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 AIPO00170 330 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 IGKV1-17P01599 117 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 HLA-DRB1P01911 266 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 SEC11BP0C7V7 166 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 C1GALT1C1LP0DN25 315 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 FAM236CP0DP71 79 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 PRB4P10163 310 aaPredicted RBP2.14□□□□□ -2.07
UBR3-211ENST00000487689 CCL1P22362 96 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 CDK2P24941 298 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 PHBP35232 272 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 RHOBP62745 196 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 RUNX1Q01196 453 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 IL15RAQ13261 267 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 NANOGP8Q6NSW7 305 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 TOMM20LQ6UXN7 152 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 GOLT1AQ6ZVE7 132 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 LRP11Q86VZ4 500 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 ANKRD29Q8N6D5 301 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 GDPD1Q8N9F7 314 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 Q8N9W7 124 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 OR10G2Q8NGC3 310 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 OR8B12Q8NGG6 310 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 OR2T27Q8NH04 317 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 OR52N1Q8NH53 320 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 BORCS5Q969J3 196 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 C12orf43Q96C57 262 aaKnown RBP2.14□□□□□ -2.07
UBR3-211ENST00000487689 LINC00477Q96M19 166 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 CNBD2Q96M20 576 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 DERL3Q96Q80 235 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 COMMD5Q9GZQ3 224 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 LYRM2Q9NU23 88 aaPredicted RBP2.14□□□□□ -2.07
UBR3-211ENST00000487689 UQCC1Q9NVA1 299 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 SPANXCQ9NY87 97 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 ZNRD1Q9P1U0 126 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 ZNF492Q9P255 531 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 AK3Q9UIJ7 227 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 DNAJC12Q9UKB3 198 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 PKHD1L1Q86WI1 4243 aa2.14□□□□□ -2.07
UBR3-211ENST00000487689 CCDC88CQ9P219 2028 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 TCHHQ07283 1943 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 TMED7-TICAM2A0A0A6YYA0 188 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 IGHV1-3A0A0C4DH29 117 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 IGKV1-6A0A0C4DH72 117 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 TRAPPC13A5PLN9 417 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 C5orf63A6NC05 138 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 MAP1LC3B2A6NCE7 125 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 LRCOL1A6NCL2 159 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 PRORSD1PA6NEY8 169 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 INMT-MINDY4F8WBC2 141 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 G3V2T6 193 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 KPNA4O00629 521 aaPredicted RBP2.13□□□□□ -2.07
UBR3-211ENST00000487689 NDUFC2O95298 119 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 FSTL3O95633 263 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 IGKV1-39P01597 117 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 IGLV3-25P01717 112 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 C1QBP02746 253 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 IGKV1D-39P04432 117 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 HLA-DQB2P05538 268 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 TLX1NBP0CAT3 122 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 SLC25A16P16260 332 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 SPI1P17947 270 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 IL1RNP18510 177 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 CRYGSP22914 178 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 CRABP1P29762 137 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 LHX2P50458 406 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 FLI1Q01543 452 aaPredicted RBP2.13□□□□□ -2.07
UBR3-211ENST00000487689 GNA12Q03113 381 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 TMEM78Q5T7P6 136 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 FAM104BQ5XKR9 115 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 ZFAND6Q6FIF0 208 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 LAIR2Q6ISS4 152 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 DCUN1D2Q6PH85 259 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 DAZ4Q86SG3 579 aaKnown RBP2.13□□□□□ -2.07
UBR3-211ENST00000487689 LINC01551Q86U37 167 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 MARCH3Q86UD3 253 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 FER1L6-AS1Q8NA97 138 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 OR9A2Q8NGT5 310 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 OR13D1Q8NGV5 346 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 OR2T4Q8NH00 348 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 OR5W2Q8NH69 310 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 RTN4IP1Q8WWV3 396 aaPredicted RBP2.13□□□□□ -2.07
UBR3-211ENST00000487689 C11orf40Q8WZ69 217 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 ROPN1LQ96C74 230 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 CMBLQ96DG6 245 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 CCL13Q99616 98 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 MAP1LC3BQ9GZQ8 125 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 RNASE7Q9H1E1 156 aaKnown RBP2.13□□□□□ -2.07
UBR3-211ENST00000487689 DAZ1Q9NQZ3 744 aaKnown RBP2.13□□□□□ -2.07
UBR3-211ENST00000487689 KCNIP2Q9NS61 270 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 ACER3Q9NUN7 267 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 PRNDQ9UKY0 176 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 ANAPC10Q9UM13 185 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 SSR3Q9UNL2 185 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 RFNGQ9Y644 331 aa2.13□□□□□ -2.07
UBR3-211ENST00000487689 IGHV3-43A0A0B4J1X8 118 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms