RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 DCANP1Q8TF63 244 aa5.28□□□□□ -1.56
UBE4B-209ENST00000487244 C20orf173Q96LM9 149 aa5.28□□□□□ -1.56
UBE4B-209ENST00000487244 TRGV9Q99603 122 aa5.28□□□□□ -1.56
UBE4B-209ENST00000487244 PBDC1Q9BVG4 233 aa5.28□□□□□ -1.56
UBE4B-209ENST00000487244 STRAPQ9Y3F4 350 aaKnown RBP5.28□□□□□ -1.56
UBE4B-209ENST00000487244 CSMD3Q7Z407 3707 aa5.28□□□□□ -1.56
UBE4B-209ENST00000487244 KMT2CQ8NEZ4 4911 aaKnown RBP5.28□□□□□ -1.56
UBE4B-209ENST00000487244 A0A1W2PS18 150 aa5.27□□□□□ -1.57
UBE4B-209ENST00000487244 C7orf66A4D0T2 115 aa5.27□□□□□ -1.57
UBE4B-209ENST00000487244 DNASE2O00115 360 aaPredicted RBP5.27□□□□□ -1.57
UBE4B-209ENST00000487244 BUB3O43684 328 aa5.27□□□□□ -1.57
UBE4B-209ENST00000487244 ZNF688P0C7X2 276 aa5.27□□□□□ -1.57
UBE4B-209ENST00000487244 GATA2P23769 480 aaPredicted RBP5.27□□□□□ -1.57
UBE4B-209ENST00000487244 BMI1P35226 326 aa5.27□□□□□ -1.57
UBE4B-209ENST00000487244 DEFB131AP59861 70 aa5.27□□□□□ -1.57
UBE4B-209ENST00000487244 RRAS2P62070 204 aaPredicted RBP5.27□□□□□ -1.57
UBE4B-209ENST00000487244 RPP30P78346 268 aaKnown RBP5.27□□□□□ -1.57
UBE4B-209ENST00000487244 AKR1C1Q04828 323 aa5.27□□□□□ -1.57
UBE4B-209ENST00000487244 ARL16Q0P5N6 197 aa5.27□□□□□ -1.57
UBE4B-209ENST00000487244 DEFB135Q30KP9 77 aa5.27□□□□□ -1.57
UBE4B-209ENST00000487244 ZFAND6Q6FIF0 208 aa5.27□□□□□ -1.57
UBE4B-209ENST00000487244 TMEM14EPQ6UXP3 125 aa5.27□□□□□ -1.57
UBE4B-209ENST00000487244 C12orf45Q8N5I9 185 aaPredicted RBP5.27□□□□□ -1.57
UBE4B-209ENST00000487244 MUC7Q8TAX7 377 aa5.27□□□□□ -1.57
UBE4B-209ENST00000487244 ENKURQ8TC29 256 aa5.27□□□□□ -1.57
UBE4B-209ENST00000487244 SMIM8Q96KF7 97 aa5.27□□□□□ -1.57
UBE4B-209ENST00000487244 OVOL2Q9BRP0 275 aa5.27□□□□□ -1.57
UBE4B-209ENST00000487244 TMEM231Q9H6L2 316 aa5.27□□□□□ -1.57
UBE4B-209ENST00000487244 BATF3Q9NR55 127 aa5.27□□□□□ -1.57
UBE4B-209ENST00000487244 PFDN2Q9UHV9 154 aa5.27□□□□□ -1.57
UBE4B-209ENST00000487244 LSM5Q9Y4Y9 91 aaKnown RBP5.27□□□□□ -1.57
UBE4B-209ENST00000487244 TRAV2A0A0B4J234 112 aa5.26□□□□□ -1.57
UBE4B-209ENST00000487244 SMCO3A2RU48 225 aa5.26□□□□□ -1.57
UBE4B-209ENST00000487244 C5orf51A6NDU8 294 aa5.26□□□□□ -1.57
UBE4B-209ENST00000487244 KNCNA6PVL3 124 aa5.26□□□□□ -1.57
UBE4B-209ENST00000487244 K7EPK0 472 aa5.26□□□□□ -1.57
UBE4B-209ENST00000487244 SIX6O95475 246 aa5.26□□□□□ -1.57
UBE4B-209ENST00000487244 CD5P06127 495 aa5.26□□□□□ -1.57
UBE4B-209ENST00000487244 EIF2B2P49770 351 aaKnown RBP5.26□□□□□ -1.57
UBE4B-209ENST00000487244 DEFB1P60022 68 aa5.26□□□□□ -1.57
UBE4B-209ENST00000487244 PAFAH1B2P68402 229 aa5.26□□□□□ -1.57
UBE4B-209ENST00000487244 IL15RAQ13261 267 aa5.26□□□□□ -1.57
UBE4B-209ENST00000487244 GRAMD2BQ96HH9 432 aa5.26□□□□□ -1.57
UBE4B-209ENST00000487244 NARS2Q96I59 477 aaKnown RBP5.26□□□□□ -1.57
UBE4B-209ENST00000487244 RAB40CQ96S21 281 aa5.26□□□□□ -1.57
UBE4B-209ENST00000487244 CDIP1Q9H305 208 aa5.26□□□□□ -1.57
UBE4B-209ENST00000487244 C11orf1Q9H5F2 150 aa5.26□□□□□ -1.57
UBE4B-209ENST00000487244 SNRPGP15A8MWD9 76 aa5.25□□□□□ -1.57
UBE4B-209ENST00000487244 TSC22D2O75157 780 aa5.25□□□□□ -1.57
UBE4B-209ENST00000487244 IL5P05113 134 aa5.25□□□□□ -1.57
UBE4B-209ENST00000487244 APOC4P55056 127 aa5.25□□□□□ -1.57
UBE4B-209ENST00000487244 TAS2R30P59541 319 aa5.25□□□□□ -1.57
UBE4B-209ENST00000487244 S100A10P60903 97 aa5.25□□□□□ -1.57
UBE4B-209ENST00000487244 DLK1P80370 383 aa5.25□□□□□ -1.57
UBE4B-209ENST00000487244 EWSR1Q01844 656 aaKnown RBP eCLIP5.25□□□□□ -1.57
UBE4B-209ENST00000487244 SLC38A11Q08AI6 406 aa5.25□□□□□ -1.57
UBE4B-209ENST00000487244 RAB32Q13637 225 aa5.25□□□□□ -1.57
UBE4B-209ENST00000487244 PSMG4Q5JS54 123 aa5.25□□□□□ -1.57
UBE4B-209ENST00000487244 CASC10Q5T4H9 136 aa5.25□□□□□ -1.57
UBE4B-209ENST00000487244 SIGLEC15Q6ZMC9 328 aa5.25□□□□□ -1.57
UBE4B-209ENST00000487244 TMEM144Q7Z5S9 345 aa5.25□□□□□ -1.57
UBE4B-209ENST00000487244 C2orf50Q96LR7 162 aa5.25□□□□□ -1.57
UBE4B-209ENST00000487244 C17orf77Q96MU5 243 aa5.25□□□□□ -1.57
UBE4B-209ENST00000487244 NRN1Q9NPD7 142 aa5.25□□□□□ -1.57
UBE4B-209ENST00000487244 DOK5Q9P104 306 aa5.25□□□□□ -1.57
UBE4B-209ENST00000487244 STARD9Q9P2P6 4700 aa5.24□□□□□ -1.57
UBE4B-209ENST00000487244 KIR2DL5BA0A0G2JN68 375 aa5.24□□□□□ -1.57
UBE4B-209ENST00000487244 KIR2DL5BA0A0G2JPC4 375 aa5.24□□□□□ -1.57
UBE4B-209ENST00000487244 IGSF23A1L1A6 192 aa5.24□□□□□ -1.57
UBE4B-209ENST00000487244 HELTA6NFD8 242 aa5.24□□□□□ -1.57
UBE4B-209ENST00000487244 FAM24AA6NFZ4 105 aa5.24□□□□□ -1.57
UBE4B-209ENST00000487244 INMT-MINDY4F8WBC2 141 aa5.24□□□□□ -1.57
UBE4B-209ENST00000487244 C3orf84H3BNL1 204 aa5.24□□□□□ -1.57
UBE4B-209ENST00000487244 L7N2F9 121 aa5.24□□□□□ -1.57
UBE4B-209ENST00000487244 SOCS3O14543 225 aa5.24□□□□□ -1.57
UBE4B-209ENST00000487244 GOSR2O14653 212 aa5.24□□□□□ -1.57
UBE4B-209ENST00000487244 SPRY2O43597 315 aa5.24□□□□□ -1.57
UBE4B-209ENST00000487244 CST7O76096 145 aa5.24□□□□□ -1.57
UBE4B-209ENST00000487244 FABP1P07148 127 aa5.24□□□□□ -1.57
UBE4B-209ENST00000487244 GIG44P09565 113 aaPredicted RBP5.24□□□□□ -1.57
UBE4B-209ENST00000487244 LINC00869P0C866 280 aa5.24□□□□□ -1.57
UBE4B-209ENST00000487244 LYL1P12980 280 aa5.24□□□□□ -1.57
UBE4B-209ENST00000487244 ORM2P19652 201 aa5.24□□□□□ -1.57
UBE4B-209ENST00000487244 C4BPBP20851 252 aa5.24□□□□□ -1.57
UBE4B-209ENST00000487244 CAV2P51636 162 aa5.24□□□□□ -1.57
UBE4B-209ENST00000487244 VAMP2P63027 116 aa5.24□□□□□ -1.57
UBE4B-209ENST00000487244 ACTL10Q5JWF8 245 aa5.24□□□□□ -1.57
UBE4B-209ENST00000487244 CYP2G1PQ6ZSU1 146 aa5.24□□□□□ -1.57
UBE4B-209ENST00000487244 Q6ZWC4 215 aa5.24□□□□□ -1.57
UBE4B-209ENST00000487244 TRPT1Q86TN4 253 aaKnown RBP5.24□□□□□ -1.57
UBE4B-209ENST00000487244 KIR2DL5AQ8N109 375 aa5.24□□□□□ -1.57
UBE4B-209ENST00000487244 TMEM217Q8N7C4 229 aa5.24□□□□□ -1.57
UBE4B-209ENST00000487244 OR10P1Q8NGE3 313 aa5.24□□□□□ -1.57
UBE4B-209ENST00000487244 OR1B1Q8NGR6 318 aa5.24□□□□□ -1.57
UBE4B-209ENST00000487244 KIR2DL5BQ8NHK3 375 aa5.24□□□□□ -1.57
UBE4B-209ENST00000487244 PPP1R14BQ96C90 147 aa5.24□□□□□ -1.57
UBE4B-209ENST00000487244 RNF183Q96D59 192 aa5.24□□□□□ -1.57
UBE4B-209ENST00000487244 UHRF2Q96PU4 802 aa5.24□□□□□ -1.57
UBE4B-209ENST00000487244 MARVELD1Q9BSK0 173 aa5.24□□□□□ -1.57
UBE4B-209ENST00000487244 SCRT1Q9BWW7 348 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms