RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 MED6O75586 246 aa17.65■□□□□ 0.42
LIME1-206ENST00000487026 C1orf194Q5T5A4 169 aa17.65■□□□□ 0.42
LIME1-206ENST00000487026 CCDC190Q86UF4 302 aa17.65■□□□□ 0.42
LIME1-206ENST00000487026 OR8I2Q8N0Y5 310 aa17.65■□□□□ 0.42
LIME1-206ENST00000487026 THAP8Q8NA92 274 aa17.65■□□□□ 0.42
LIME1-206ENST00000487026 SAV1Q9H4B6 383 aaPredicted RBP17.65■□□□□ 0.42
LIME1-206ENST00000487026 ZNF701M0R085 212 aaPredicted RBP17.64■□□□□ 0.41
LIME1-206ENST00000487026 GGNBP1Q5YKI7 109 aa17.64■□□□□ 0.41
LIME1-206ENST00000487026 OR4B1Q8NGF8 309 aa17.64■□□□□ 0.41
LIME1-206ENST00000487026 COQ8AQ8NI60 647 aa17.64■□□□□ 0.41
LIME1-206ENST00000487026 SCRT1Q9BWW7 348 aa17.64■□□□□ 0.41
LIME1-206ENST00000487026 IGHV3OR16-12A0A075B7B8 117 aa17.63■□□□□ 0.41
LIME1-206ENST00000487026 PSMB3P49720 205 aa17.63■□□□□ 0.41
LIME1-206ENST00000487026 ZNF705AQ6ZN79 300 aaPredicted RBP17.63■□□□□ 0.41
LIME1-206ENST00000487026 FOXI2Q6ZQN5 318 aa17.63■□□□□ 0.41
LIME1-206ENST00000487026 CIB3Q96Q77 187 aaPredicted RBP17.63■□□□□ 0.41
LIME1-206ENST00000487026 DEFB131BA0A096LNP1 70 aa17.62■□□□□ 0.41
LIME1-206ENST00000487026 PRSS46E5RG02 174 aa17.62■□□□□ 0.41
LIME1-206ENST00000487026 F6UB75 175 aa17.62■□□□□ 0.41
LIME1-206ENST00000487026 H3BP45 60 aa17.62■□□□□ 0.41
LIME1-206ENST00000487026 GATA2P23769 480 aaPredicted RBP17.62■□□□□ 0.41
LIME1-206ENST00000487026 EMP1P54849 157 aa17.62■□□□□ 0.41
LIME1-206ENST00000487026 RPP30P78346 268 aaKnown RBP17.62■□□□□ 0.41
LIME1-206ENST00000487026 SPANXN5Q5MJ07 72 aa17.62■□□□□ 0.41
LIME1-206ENST00000487026 TMEM182Q6ZP80 229 aaPredicted RBP17.62■□□□□ 0.41
LIME1-206ENST00000487026 SLC35B3Q9H1N7 401 aa17.62■□□□□ 0.41
LIME1-206ENST00000487026 ZNF709Q8N972 641 aa17.61■□□□□ 0.41
LIME1-206ENST00000487026 RNF126Q9BV68 326 aa17.61■□□□□ 0.41
LIME1-206ENST00000487026 SLC25A22Q9H936 323 aa17.61■□□□□ 0.41
LIME1-206ENST00000487026 ZNF705FA8MVS1 300 aaPredicted RBP17.6■□□□□ 0.41
LIME1-206ENST00000487026 ADAP1O75689 374 aa17.6■□□□□ 0.41
LIME1-206ENST00000487026 ZNF705DP0CH99 300 aaPredicted RBP17.6■□□□□ 0.41
LIME1-206ENST00000487026 ZNF705BP0CI00 300 aaPredicted RBP17.6■□□□□ 0.41
LIME1-206ENST00000487026 DEDD2Q8WXF8 326 aa17.6■□□□□ 0.41
LIME1-206ENST00000487026 C20orf173Q96LM9 149 aa17.6■□□□□ 0.41
LIME1-206ENST00000487026 C17orf77Q96MU5 243 aa17.6■□□□□ 0.41
LIME1-206ENST00000487026 NEU1Q99519 415 aa17.6■□□□□ 0.41
LIME1-206ENST00000487026 SLC25A32Q9H2D1 315 aa17.6■□□□□ 0.41
LIME1-206ENST00000487026 HECTD4Q9Y4D8 3996 aa17.59■□□□□ 0.41
LIME1-206ENST00000487026 ISLRO14498 428 aa17.59■□□□□ 0.41
LIME1-206ENST00000487026 ORM2P19652 201 aa17.59■□□□□ 0.41
LIME1-206ENST00000487026 FAM78BQ5VT40 261 aa17.59■□□□□ 0.41
LIME1-206ENST00000487026 C16orf92Q96LL3 132 aa17.59■□□□□ 0.41
LIME1-206ENST00000487026 RSG1Q9BU20 258 aa17.59■□□□□ 0.41
LIME1-206ENST00000487026 ZNF98A6NK75 572 aa17.58■□□□□ 0.4
LIME1-206ENST00000487026 PSG9Q00887 426 aa17.58■□□□□ 0.4
LIME1-206ENST00000487026 EBLN2Q6P2I7 272 aa17.58■□□□□ 0.4
LIME1-206ENST00000487026 SRRQ9GZT4 340 aa17.58■□□□□ 0.4
LIME1-206ENST00000487026 RBM38Q9H0Z9 239 aaKnown RBP17.58■□□□□ 0.4
LIME1-206ENST00000487026 FLVCR2Q9UPI3 526 aa17.58■□□□□ 0.4
LIME1-206ENST00000487026 STRAPQ9Y3F4 350 aaKnown RBP17.58■□□□□ 0.4
LIME1-206ENST00000487026 A0A0J9YX75 114 aa17.57■□□□□ 0.4
LIME1-206ENST00000487026 C9orf170A2RU37 121 aa17.57■□□□□ 0.4
LIME1-206ENST00000487026 CFDP00746 253 aaPredicted RBP17.57■□□□□ 0.4
LIME1-206ENST00000487026 GALR1P47211 349 aa17.57■□□□□ 0.4
LIME1-206ENST00000487026 POLR2GP62487 172 aaKnown RBP eCLIP17.57■□□□□ 0.4
LIME1-206ENST00000487026 AKR1C1Q04828 323 aa17.57■□□□□ 0.4
LIME1-206ENST00000487026 BAK1Q16611 211 aa17.57■□□□□ 0.4
LIME1-206ENST00000487026 SPANXN2Q5MJ10 180 aa17.57■□□□□ 0.4
LIME1-206ENST00000487026 BPIFCQ8NFQ6 507 aa17.57■□□□□ 0.4
LIME1-206ENST00000487026 CLUHP3Q96NS8 147 aa17.57■□□□□ 0.4
LIME1-206ENST00000487026 BATF3Q9NR55 127 aa17.57■□□□□ 0.4
LIME1-206ENST00000487026 LINC00854A0A1B0GVQ3 168 aa17.56■□□□□ 0.4
LIME1-206ENST00000487026 SMIM9A6NGZ8 99 aa17.56■□□□□ 0.4
LIME1-206ENST00000487026 SPART-AS1P0CW21 52 aa17.56■□□□□ 0.4
LIME1-206ENST00000487026 PAX9P55771 341 aa17.56■□□□□ 0.4
LIME1-206ENST00000487026 ID3Q02535 119 aa17.56■□□□□ 0.4
LIME1-206ENST00000487026 SPATA31B1PQ5VZV4 182 aa17.56■□□□□ 0.4
LIME1-206ENST00000487026 ACOT7LQ6ZUV0 252 aa17.56■□□□□ 0.4
LIME1-206ENST00000487026 OR1B1Q8NGR6 318 aa17.56■□□□□ 0.4
LIME1-206ENST00000487026 RPRMQ9NS64 109 aa17.56■□□□□ 0.4
LIME1-206ENST00000487026 PLA2G2EQ9NZK7 142 aa17.56■□□□□ 0.4
LIME1-206ENST00000487026 SMCO3A2RU48 225 aa17.55■□□□□ 0.4
LIME1-206ENST00000487026 AMBPP02760 352 aa17.55■□□□□ 0.4
LIME1-206ENST00000487026 INPP1P49441 399 aa17.55■□□□□ 0.4
LIME1-206ENST00000487026 UBE2MP61081 183 aaKnown RBP17.55■□□□□ 0.4
LIME1-206ENST00000487026 IGFL4Q6B9Z1 124 aa17.55■□□□□ 0.4
LIME1-206ENST00000487026 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.55■□□□□ 0.4
LIME1-206ENST00000487026 C1orf158Q8N1D5 194 aa17.55■□□□□ 0.4
LIME1-206ENST00000487026 SLC45A2Q9UMX9 530 aa17.55■□□□□ 0.4
LIME1-206ENST00000487026 RFNGQ9Y644 331 aa17.55■□□□□ 0.4
LIME1-206ENST00000487026 NDUFB6O95139 128 aa17.54■□□□□ 0.4
LIME1-206ENST00000487026 MEOX2P50222 304 aa17.54■□□□□ 0.4
LIME1-206ENST00000487026 NDUFAF3Q9BU61 184 aa17.54■□□□□ 0.4
LIME1-206ENST00000487026 TMEM147Q9BVK8 224 aa17.54■□□□□ 0.4
LIME1-206ENST00000487026 PSENENQ9NZ42 101 aa17.54■□□□□ 0.4
LIME1-206ENST00000487026 DOK5Q9P104 306 aa17.54■□□□□ 0.4
LIME1-206ENST00000487026 TMEM189A5PLL7 270 aa17.53■□□□□ 0.4
LIME1-206ENST00000487026 TRIQKQ629K1 86 aa17.53■□□□□ 0.4
LIME1-206ENST00000487026 C7orf50Q9BRJ6 194 aaKnown RBP17.53■□□□□ 0.4
LIME1-206ENST00000487026 GOLT1BQ9Y3E0 138 aa17.53■□□□□ 0.4
LIME1-206ENST00000487026 SSSCA1O60232 199 aa17.52■□□□□ 0.4
LIME1-206ENST00000487026 CCNKO75909 580 aa17.52■□□□□ 0.4
LIME1-206ENST00000487026 FAM222AQ5U5X8 452 aa17.52■□□□□ 0.4
LIME1-206ENST00000487026 SAMD13Q5VXD3 122 aa17.52■□□□□ 0.4
LIME1-206ENST00000487026 TMEM144Q7Z5S9 345 aa17.52■□□□□ 0.4
LIME1-206ENST00000487026 OR4D5Q8NGN0 318 aa17.52■□□□□ 0.4
LIME1-206ENST00000487026 DKK2Q9UBU2 259 aa17.52■□□□□ 0.4
LIME1-206ENST00000487026 NAP1L6A6NFF2 107 aa17.51■□□□□ 0.39
LIME1-206ENST00000487026 IL5P05113 134 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms