RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 LINC00322Q6ZN03 302 aaPredicted RBP0.53□□□□□ -2.32
LTN1-206ENST00000486427 BTF3L4Q96K17 158 aa0.53□□□□□ -2.32
LTN1-206ENST00000486427 KIFC1Q9BW19 673 aa0.53□□□□□ -2.32
LTN1-206ENST00000486427 NMNAT1Q9HAN9 279 aaPredicted RBP0.53□□□□□ -2.32
LTN1-206ENST00000486427 EML5Q05BV3 1969 aa0.53□□□□□ -2.32
LTN1-206ENST00000486427 MYH7BA7E2Y1 1941 aa0.52□□□□□ -2.33
LTN1-206ENST00000486427 PHGR1C9JFL3 82 aa0.52□□□□□ -2.33
LTN1-206ENST00000486427 DNAL4O96015 105 aa0.52□□□□□ -2.33
LTN1-206ENST00000486427 EFNA4P52798 201 aa0.52□□□□□ -2.33
LTN1-206ENST00000486427 ZNF833PQ6ZTB9 187 aa0.52□□□□□ -2.33
LTN1-206ENST00000486427 ST6GALNAC3Q8NDV1 305 aa0.52□□□□□ -2.33
LTN1-206ENST00000486427 MNS1Q8NEH6 495 aa0.52□□□□□ -2.33
LTN1-206ENST00000486427 OR2T35Q8NGX2 323 aa0.52□□□□□ -2.33
LTN1-206ENST00000486427 YPEL2Q96QA6 119 aa0.52□□□□□ -2.33
LTN1-206ENST00000486427 KDM6AO15550 1401 aaPredicted RBP0.52□□□□□ -2.33
LTN1-206ENST00000486427 IGHV1-58A0A0C4DH39 117 aa0.51□□□□□ -2.33
LTN1-206ENST00000486427 A8MWV9 139 aa0.51□□□□□ -2.33
LTN1-206ENST00000486427 ARHGEF11O15085 1522 aa0.51□□□□□ -2.33
LTN1-206ENST00000486427 NDUFB3O43676 98 aa0.51□□□□□ -2.33
LTN1-206ENST00000486427 NUPR1O60356 82 aa0.51□□□□□ -2.33
LTN1-206ENST00000486427 CST2P09228 141 aa0.51□□□□□ -2.33
LTN1-206ENST00000486427 SPA17Q15506 151 aa0.51□□□□□ -2.33
LTN1-206ENST00000486427 KRTAP21-1Q3LI58 79 aa0.51□□□□□ -2.33
LTN1-206ENST00000486427 KRTAP26-1Q6PEX3 210 aa0.51□□□□□ -2.33
LTN1-206ENST00000486427 OR10K1Q8NGX5 313 aa0.51□□□□□ -2.33
LTN1-206ENST00000486427 LINC00052Q96N35 136 aa0.51□□□□□ -2.33
LTN1-206ENST00000486427 IMUPQ9GZP8 106 aa0.51□□□□□ -2.33
LTN1-206ENST00000486427 TAS2R7Q9NYW3 318 aa0.51□□□□□ -2.33
LTN1-206ENST00000486427 ORMDL1Q9P0S3 153 aa0.51□□□□□ -2.33
LTN1-206ENST00000486427 A0A1W2PPM0 123 aa0.5□□□□□ -2.33
LTN1-206ENST00000486427 B4DSR2 109 aa0.5□□□□□ -2.33
LTN1-206ENST00000486427 FADDQ13158 208 aa0.5□□□□□ -2.33
LTN1-206ENST00000486427 AKIRIN2Q53H80 203 aa0.5□□□□□ -2.33
LTN1-206ENST00000486427 C2orf82Q6UX34 121 aa0.5□□□□□ -2.33
LTN1-206ENST00000486427 GOLT1AQ6ZVE7 132 aa0.5□□□□□ -2.33
LTN1-206ENST00000486427 GRINAQ7Z429 371 aa0.5□□□□□ -2.33
LTN1-206ENST00000486427 PLPP5Q8NEB5 264 aa0.5□□□□□ -2.33
LTN1-206ENST00000486427 OR10X1Q8NGY0 326 aa0.5□□□□□ -2.33
LTN1-206ENST00000486427 TP53RKQ96S44 253 aa0.5□□□□□ -2.33
LTN1-206ENST00000486427 SLC25A21Q9BQT8 299 aaPredicted RBP0.5□□□□□ -2.33
LTN1-206ENST00000486427 TMEM14CQ9P0S9 112 aa0.5□□□□□ -2.33
LTN1-206ENST00000486427 PLXNA4Q9HCM2 1894 aa0.5□□□□□ -2.33
LTN1-206ENST00000486427 ALPK3Q96L96 1907 aa0.49□□□□□ -2.33
LTN1-206ENST00000486427 M0R378 163 aa0.49□□□□□ -2.33
LTN1-206ENST00000486427 TAX1BP3O14907 124 aa0.49□□□□□ -2.33
LTN1-206ENST00000486427 HOXA6P31267 233 aa0.49□□□□□ -2.33
LTN1-206ENST00000486427 DSCR4P56555 118 aaPredicted RBP0.49□□□□□ -2.33
LTN1-206ENST00000486427 BCL2L15Q5TBC7 163 aa0.49□□□□□ -2.33
LTN1-206ENST00000486427 C4orf22Q6V702 233 aa0.49□□□□□ -2.33
LTN1-206ENST00000486427 PCTPQ9UKL6 214 aa0.49□□□□□ -2.33
LTN1-206ENST00000486427 FAM32AQ9Y421 112 aaKnown RBP0.49□□□□□ -2.33
LTN1-206ENST00000486427 TLCD2A6NGC4 264 aa0.48□□□□□ -2.33
LTN1-206ENST00000486427 E7EUB6 86 aa0.48□□□□□ -2.33
LTN1-206ENST00000486427 IFNA7P01567 189 aa0.48□□□□□ -2.33
LTN1-206ENST00000486427 C1QBP02746 253 aa0.48□□□□□ -2.33
LTN1-206ENST00000486427 IFNA6P05013 189 aa0.48□□□□□ -2.33
LTN1-206ENST00000486427 UBE2BP63146 152 aa0.48□□□□□ -2.33
LTN1-206ENST00000486427 GKN2Q86XP6 184 aa0.48□□□□□ -2.33
LTN1-206ENST00000486427 ENY2Q9NPA8 101 aa0.48□□□□□ -2.33
LTN1-206ENST00000486427 LY96Q9Y6Y9 160 aa0.48□□□□□ -2.33
LTN1-206ENST00000486427 PHRF1Q9P1Y6 1649 aaKnown RBP0.48□□□□□ -2.33
LTN1-206ENST00000486427 MYH10P35580 1976 aa0.48□□□□□ -2.33
LTN1-206ENST00000486427 CASP8AP2Q9UKL3 1982 aa0.48□□□□□ -2.33
LTN1-206ENST00000486427 CECR2Q9BXF3 1484 aa0.48□□□□□ -2.33
LTN1-206ENST00000486427 MUC5ACP98088 5654 aa0.47□□□□□ -2.33
LTN1-206ENST00000486427 SCN8AQ9UQD0 1980 aa0.47□□□□□ -2.33
LTN1-206ENST00000486427 TRAV10A0A0B4J240 114 aa0.47□□□□□ -2.33
LTN1-206ENST00000486427 TMEM256-PLSCR3K7ERE1 68 aa0.47□□□□□ -2.33
LTN1-206ENST00000486427 GGCTO75223 188 aaKnown RBP0.47□□□□□ -2.33
LTN1-206ENST00000486427 E2F6O75461 281 aa0.47□□□□□ -2.33
LTN1-206ENST00000486427 KLF7O75840 302 aaPredicted RBP0.47□□□□□ -2.33
LTN1-206ENST00000486427 SERPINA1P01009 418 aa0.47□□□□□ -2.33
LTN1-206ENST00000486427 S100A6P06703 90 aa0.47□□□□□ -2.33
LTN1-206ENST00000486427 HSPE1P61604 102 aaKnown RBP0.47□□□□□ -2.33
LTN1-206ENST00000486427 OR5D14Q8NGL3 314 aa0.47□□□□□ -2.33
LTN1-206ENST00000486427 CANT1Q8WVQ1 401 aa0.47□□□□□ -2.33
LTN1-206ENST00000486427 TEX37Q96LM6 180 aa0.47□□□□□ -2.33
LTN1-206ENST00000486427 OPTCQ9UBM4 332 aa0.47□□□□□ -2.33
LTN1-206ENST00000486427 ARL2BPQ9Y2Y0 163 aa0.47□□□□□ -2.33
LTN1-206ENST00000486427 ADGRL3Q9HAR2 1447 aa0.47□□□□□ -2.33
LTN1-206ENST00000486427 CAMSAP1Q5T5Y3 1602 aa0.46□□□□□ -2.34
LTN1-206ENST00000486427 A0A087WSZ3 146 aa0.46□□□□□ -2.34
LTN1-206ENST00000486427 HMGB3O15347 200 aaKnown RBP0.46□□□□□ -2.34
LTN1-206ENST00000486427 CD2P06729 351 aa0.46□□□□□ -2.34
LTN1-206ENST00000486427 REEP5Q00765 189 aa0.46□□□□□ -2.34
LTN1-206ENST00000486427 MYL5Q02045 173 aa0.46□□□□□ -2.34
LTN1-206ENST00000486427 HAGHLQ6PII5 290 aaPredicted RBP0.46□□□□□ -2.34
LTN1-206ENST00000486427 Q8TAT8 98 aa0.46□□□□□ -2.34
LTN1-206ENST00000486427 LYSMD1Q96S90 227 aa0.46□□□□□ -2.34
LTN1-206ENST00000486427 C9orf16Q9BUW7 83 aa0.46□□□□□ -2.34
LTN1-206ENST00000486427 PSTPIP2Q9H939 334 aa0.46□□□□□ -2.34
LTN1-206ENST00000486427 ARMC1Q9NVT9 282 aa0.46□□□□□ -2.34
LTN1-206ENST00000486427 RFX7Q2KHR2 1363 aa0.45□□□□□ -2.34
LTN1-206ENST00000486427 TMEM210A6NLX4 147 aa0.45□□□□□ -2.34
LTN1-206ENST00000486427 SNRNP200O75643 2136 aaKnown RBP0.45□□□□□ -2.34
LTN1-206ENST00000486427 ERC2-IT1O76042 136 aa0.45□□□□□ -2.34
LTN1-206ENST00000486427 IGLV1-51P01701 117 aa0.45□□□□□ -2.34
LTN1-206ENST00000486427 DYNLT3P51808 116 aa0.45□□□□□ -2.34
LTN1-206ENST00000486427 TAF1AQ15573 450 aaPredicted RBP0.45□□□□□ -2.34
LTN1-206ENST00000486427 PATE2Q6UY27 113 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms