RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 OR51G1Q8NGK1 321 aa11.4□□□□□ -0.59
POLR2J3-204ENST00000486319 OR5R1Q8NH85 324 aa11.4□□□□□ -0.59
POLR2J3-204ENST00000486319 TVP23CQ96ET8 276 aa11.4□□□□□ -0.59
POLR2J3-204ENST00000486319 FAM167A-AS1Q96KT0 104 aa11.4□□□□□ -0.59
POLR2J3-204ENST00000486319 SLC25A2Q9BXI2 301 aa11.4□□□□□ -0.59
POLR2J3-204ENST00000486319 TRBV9A0A0B4J1U6 114 aa11.39□□□□□ -0.59
POLR2J3-204ENST00000486319 TRAV41A0A0B4J266 112 aa11.39□□□□□ -0.59
POLR2J3-204ENST00000486319 FAM74A7A6NL05 159 aa11.39□□□□□ -0.59
POLR2J3-204ENST00000486319 ZNF727A8MUV8 499 aa11.39□□□□□ -0.59
POLR2J3-204ENST00000486319 G3V318 75 aa11.39□□□□□ -0.59
POLR2J3-204ENST00000486319 DNASE2O00115 360 aaPredicted RBP11.39□□□□□ -0.59
POLR2J3-204ENST00000486319 IGHG2P01859 326 aa11.39□□□□□ -0.59
POLR2J3-204ENST00000486319 IER3P46695 156 aa11.39□□□□□ -0.59
POLR2J3-204ENST00000486319 ATP5G3P48201 142 aa11.39□□□□□ -0.59
POLR2J3-204ENST00000486319 PNRC1Q12796 327 aaPredicted RBP11.39□□□□□ -0.59
POLR2J3-204ENST00000486319 C9orf152Q5JTZ5 239 aa11.39□□□□□ -0.59
POLR2J3-204ENST00000486319 NECAP1Q8NC96 275 aa11.39□□□□□ -0.59
POLR2J3-204ENST00000486319 ZNF503Q96F45 646 aa11.39□□□□□ -0.59
POLR2J3-204ENST00000486319 UHRF2Q96PU4 802 aa11.39□□□□□ -0.59
POLR2J3-204ENST00000486319 GAR1Q9NY12 217 aaKnown RBP11.39□□□□□ -0.59
POLR2J3-204ENST00000486319 HIGD1AQ9Y241 93 aa11.39□□□□□ -0.59
POLR2J3-204ENST00000486319 C7orf77A4D0Y5 90 aa11.38□□□□□ -0.59
POLR2J3-204ENST00000486319 IGHV4-59P01825 116 aa11.38□□□□□ -0.59
POLR2J3-204ENST00000486319 CRYBA1P05813 215 aa11.38□□□□□ -0.59
POLR2J3-204ENST00000486319 LYZP61626 148 aa11.38□□□□□ -0.59
POLR2J3-204ENST00000486319 FOXL1Q12952 345 aa11.38□□□□□ -0.59
POLR2J3-204ENST00000486319 C19orf54Q5BKX5 351 aa11.38□□□□□ -0.59
POLR2J3-204ENST00000486319 MORN5Q5VZ52 161 aa11.38□□□□□ -0.59
POLR2J3-204ENST00000486319 S100A7AQ86SG5 101 aa11.38□□□□□ -0.59
POLR2J3-204ENST00000486319 Q8WTZ3 238 aa11.38□□□□□ -0.59
POLR2J3-204ENST00000486319 SMIM7Q9BQ49 75 aa11.38□□□□□ -0.59
POLR2J3-204ENST00000486319 PAXXQ9BUH6 204 aa11.38□□□□□ -0.59
POLR2J3-204ENST00000486319 OR51M1Q9H341 326 aa11.38□□□□□ -0.59
POLR2J3-204ENST00000486319 RPS10P5Q9NQ39 176 aa11.38□□□□□ -0.59
POLR2J3-204ENST00000486319 TRAV5A0A0B4J249 113 aa11.37□□□□□ -0.59
POLR2J3-204ENST00000486319 A0A1W2PRE2 83 aa11.37□□□□□ -0.59
POLR2J3-204ENST00000486319 FAM181BA6NEQ2 426 aa11.37□□□□□ -0.59
POLR2J3-204ENST00000486319 B4DEV8 164 aa11.37□□□□□ -0.59
POLR2J3-204ENST00000486319 F8W735 103 aaPredicted RBP11.37□□□□□ -0.59
POLR2J3-204ENST00000486319 UBE2L3P68036 154 aaKnown RBP11.37□□□□□ -0.59
POLR2J3-204ENST00000486319 RHOGP84095 191 aa11.37□□□□□ -0.59
POLR2J3-204ENST00000486319 C15orf32Q32M92 178 aa11.37□□□□□ -0.59
POLR2J3-204ENST00000486319 C3orf56Q8N813 242 aa11.37□□□□□ -0.59
POLR2J3-204ENST00000486319 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.37□□□□□ -0.59
POLR2J3-204ENST00000486319 RPUSD4Q96CM3 377 aaKnown RBP11.37□□□□□ -0.59
POLR2J3-204ENST00000486319 C20orf24Q9BUV8 137 aa11.37□□□□□ -0.59
POLR2J3-204ENST00000486319 PARLQ9H300 379 aa11.37□□□□□ -0.59
POLR2J3-204ENST00000486319 NAT8Q9UHE5 227 aa11.37□□□□□ -0.59
POLR2J3-204ENST00000486319 YTHDF2Q9Y5A9 579 aaKnown RBP11.37□□□□□ -0.59
POLR2J3-204ENST00000486319 S4R3C0 116 aa11.37□□□□□ -0.59
POLR2J3-204ENST00000486319 OR2C1O95371 312 aa11.36□□□□□ -0.59
POLR2J3-204ENST00000486319 BRI3O95415 125 aa11.36□□□□□ -0.59
POLR2J3-204ENST00000486319 OR10J4P0C629 311 aa11.36□□□□□ -0.59
POLR2J3-204ENST00000486319 KIAA0141Q14154 515 aaPredicted RBP11.36□□□□□ -0.59
POLR2J3-204ENST00000486319 RNF125Q96EQ8 232 aa11.36□□□□□ -0.59
POLR2J3-204ENST00000486319 SDF2L1Q9HCN8 221 aa11.36□□□□□ -0.59
POLR2J3-204ENST00000486319 SMCO4Q9NRQ5 59 aa11.36□□□□□ -0.59
POLR2J3-204ENST00000486319 MRPL27Q9P0M9 148 aaKnown RBP11.36□□□□□ -0.59
POLR2J3-204ENST00000486319 WI2-2373I1.2A0A1W2PRP0 233 aa11.35□□□□□ -0.59
POLR2J3-204ENST00000486319 FAM223BA6NKX1 122 aa11.35□□□□□ -0.59
POLR2J3-204ENST00000486319 H3BUA1 57 aa11.35□□□□□ -0.59
POLR2J3-204ENST00000486319 AP4M1O00189 453 aa11.35□□□□□ -0.59
POLR2J3-204ENST00000486319 TMEM241Q24JQ0 296 aa11.35□□□□□ -0.59
POLR2J3-204ENST00000486319 ZNF674Q2M3X9 581 aa11.35□□□□□ -0.59
POLR2J3-204ENST00000486319 TMEM88Q6PEY1 159 aa11.35□□□□□ -0.59
POLR2J3-204ENST00000486319 FAM223AQ8IWN6 122 aa11.35□□□□□ -0.59
POLR2J3-204ENST00000486319 ZNF491Q8N8L2 437 aa11.35□□□□□ -0.59
POLR2J3-204ENST00000486319 ZNF502Q8TBZ5 544 aa11.35□□□□□ -0.59
POLR2J3-204ENST00000486319 EEF1AKMT3Q96AZ1 226 aa11.35□□□□□ -0.59
POLR2J3-204ENST00000486319 ATP6V0BQ99437 205 aa11.35□□□□□ -0.59
POLR2J3-204ENST00000486319 TRBV7-1A0A0A6YYK4 115 aa11.35□□□□□ -0.59
POLR2J3-204ENST00000486319 OR2T8A6NH00 312 aa11.35□□□□□ -0.59
POLR2J3-204ENST00000486319 HAX1O00165 279 aa11.35□□□□□ -0.59
POLR2J3-204ENST00000486319 NUPL2O15504 423 aaKnown RBP11.35□□□□□ -0.59
POLR2J3-204ENST00000486319 IL4P05112 153 aa11.35□□□□□ -0.59
POLR2J3-204ENST00000486319 CTSGP08311 255 aa11.35□□□□□ -0.59
POLR2J3-204ENST00000486319 SLC25A39Q9BZJ4 359 aaPredicted RBP11.35□□□□□ -0.59
POLR2J3-204ENST00000486319 ZNF580Q9UK33 172 aa11.35□□□□□ -0.59
POLR2J3-204ENST00000486319 A0A087WWC5 75 aa11.34□□□□□ -0.59
POLR2J3-204ENST00000486319 NDUFB4O95168 129 aa11.34□□□□□ -0.59
POLR2J3-204ENST00000486319 IGHV3-23P01764 117 aa11.34□□□□□ -0.59
POLR2J3-204ENST00000486319 PYYP10082 97 aa11.34□□□□□ -0.59
POLR2J3-204ENST00000486319 NPPCP23582 126 aa11.34□□□□□ -0.59
POLR2J3-204ENST00000486319 S100A7P31151 101 aa11.34□□□□□ -0.59
POLR2J3-204ENST00000486319 RPL15P61313 204 aaKnown RBP11.34□□□□□ -0.59
POLR2J3-204ENST00000486319 BLCAPP62952 87 aa11.34□□□□□ -0.59
POLR2J3-204ENST00000486319 ATP5G2Q06055 141 aa11.34□□□□□ -0.59
POLR2J3-204ENST00000486319 CBLN2Q8IUK8 224 aa11.34□□□□□ -0.59
POLR2J3-204ENST00000486319 C11orf52Q96A22 123 aa11.34□□□□□ -0.59
POLR2J3-204ENST00000486319 FXYD5Q96DB9 178 aa11.34□□□□□ -0.59
POLR2J3-204ENST00000486319 TUBA4BQ9H853 241 aa11.34□□□□□ -0.59
POLR2J3-204ENST00000486319 VPREB3Q9UKI3 123 aa11.34□□□□□ -0.59
POLR2J3-204ENST00000486319 PPIFP30405 207 aaKnown RBP11.33□□□□□ -0.6
POLR2J3-204ENST00000486319 ZNF600Q6ZNG1 722 aa11.33□□□□□ -0.6
POLR2J3-204ENST00000486319 MS4A10Q96PG2 267 aa11.33□□□□□ -0.6
POLR2J3-204ENST00000486319 SHANK2-AS3Q9BTD1 123 aa11.33□□□□□ -0.6
POLR2J3-204ENST00000486319 TMEM14CQ9P0S9 112 aa11.33□□□□□ -0.6
POLR2J3-204ENST00000486319 LINC00527Q9UJ94 153 aa11.33□□□□□ -0.6
POLR2J3-204ENST00000486319 RNF24Q9Y225 148 aa11.33□□□□□ -0.6
POLR2J3-204ENST00000486319 PRELID1Q9Y255 219 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms