RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 SOSTQ9BQB4 213 aa7.62□□□□□ -1.19
HMGN1-215ENST00000485550 SLIRPQ9GZT3 109 aaKnown RBP7.62□□□□□ -1.19
HMGN1-215ENST00000485550 IGHV4-4A0A075B6R2 117 aa7.61□□□□□ -1.19
HMGN1-215ENST00000485550 IGKV1D-37A0A075B6S9 117 aa7.61□□□□□ -1.19
HMGN1-215ENST00000485550 IGHV3OR16-12A0A075B7B8 117 aa7.61□□□□□ -1.19
HMGN1-215ENST00000485550 TRAV10A0A0B4J240 114 aa7.61□□□□□ -1.19
HMGN1-215ENST00000485550 H3BMQ9 156 aa7.61□□□□□ -1.19
HMGN1-215ENST00000485550 EREGO14944 169 aa7.61□□□□□ -1.19
HMGN1-215ENST00000485550 NOL3O60936 208 aaKnown RBP7.61□□□□□ -1.19
HMGN1-215ENST00000485550 TCTAP57738 103 aa7.61□□□□□ -1.19
HMGN1-215ENST00000485550 NUTF2P61970 127 aaKnown RBP7.61□□□□□ -1.19
HMGN1-215ENST00000485550 GDF5OSQ5U4N7 250 aa7.61□□□□□ -1.19
HMGN1-215ENST00000485550 SLC35E1Q96K37 410 aa7.61□□□□□ -1.19
HMGN1-215ENST00000485550 SCRT1Q9BWW7 348 aa7.61□□□□□ -1.19
HMGN1-215ENST00000485550 WDR12Q9GZL7 423 aaKnown RBP7.61□□□□□ -1.19
HMGN1-215ENST00000485550 CACFD1Q9UGQ2 172 aa7.61□□□□□ -1.19
HMGN1-215ENST00000485550 HSPG2P98160 4391 aa7.6□□□□□ -1.19
HMGN1-215ENST00000485550 M0R2N4 97 aa7.6□□□□□ -1.19
HMGN1-215ENST00000485550 VAMP1P23763 118 aa7.6□□□□□ -1.19
HMGN1-215ENST00000485550 GPX4P36969 197 aaPredicted RBP7.6□□□□□ -1.19
HMGN1-215ENST00000485550 EMP1P54849 157 aa7.6□□□□□ -1.19
HMGN1-215ENST00000485550 C12orf74Q32Q52 190 aa7.6□□□□□ -1.19
HMGN1-215ENST00000485550 PYDC2Q56P42 97 aa7.6□□□□□ -1.19
HMGN1-215ENST00000485550 OR4B1Q8NGF8 309 aa7.6□□□□□ -1.19
HMGN1-215ENST00000485550 PPP1R14BQ96C90 147 aa7.6□□□□□ -1.19
HMGN1-215ENST00000485550 BCL7BQ9BQE9 202 aa7.6□□□□□ -1.19
HMGN1-215ENST00000485550 C1QTNF4Q9BXJ3 329 aa7.6□□□□□ -1.19
HMGN1-215ENST00000485550 MAGT1Q9H0U3 335 aa7.6□□□□□ -1.19
HMGN1-215ENST00000485550 DEFB131BA0A096LNP1 70 aa7.59□□□□□ -1.19
HMGN1-215ENST00000485550 SNRPGP15A8MWD9 76 aa7.59□□□□□ -1.19
HMGN1-215ENST00000485550 HLA-DRB4P13762 266 aa7.59□□□□□ -1.19
HMGN1-215ENST00000485550 NKX2-1P43699 371 aaPredicted RBP7.59□□□□□ -1.19
HMGN1-215ENST00000485550 RAB11AP62491 216 aa7.59□□□□□ -1.19
HMGN1-215ENST00000485550 SRPXP78539 464 aa7.59□□□□□ -1.19
HMGN1-215ENST00000485550 TMEM128Q5BJH2 165 aa7.59□□□□□ -1.19
HMGN1-215ENST00000485550 OR8G2PQ6IF36 304 aa7.59□□□□□ -1.19
HMGN1-215ENST00000485550 KRTAP19-1Q8IUB9 90 aa7.59□□□□□ -1.19
HMGN1-215ENST00000485550 TOMM5Q8N4H5 51 aa7.59□□□□□ -1.19
HMGN1-215ENST00000485550 SEPSECSQ9HD40 501 aaKnown RBP7.59□□□□□ -1.19
HMGN1-215ENST00000485550 PFDN2Q9UHV9 154 aa7.59□□□□□ -1.19
HMGN1-215ENST00000485550 HLA-DRB4X5D2U9 266 aa7.59□□□□□ -1.19
HMGN1-215ENST00000485550 F6UB75 175 aa7.58□□□□□ -1.2
HMGN1-215ENST00000485550 WRBO00258 174 aa7.58□□□□□ -1.2
HMGN1-215ENST00000485550 PITX3O75364 302 aa7.58□□□□□ -1.2
HMGN1-215ENST00000485550 HOXB5P09067 269 aa7.58□□□□□ -1.2
HMGN1-215ENST00000485550 FAUP35544 74 aaKnown RBP7.58□□□□□ -1.2
HMGN1-215ENST00000485550 ID1P41134 155 aa7.58□□□□□ -1.2
HMGN1-215ENST00000485550 OR8I2Q8N0Y5 310 aa7.58□□□□□ -1.2
HMGN1-215ENST00000485550 COQ8AQ8NI60 647 aa7.58□□□□□ -1.2
HMGN1-215ENST00000485550 TRIM63Q969Q1 353 aa7.58□□□□□ -1.2
HMGN1-215ENST00000485550 SAV1Q9H4B6 383 aaPredicted RBP7.58□□□□□ -1.2
HMGN1-215ENST00000485550 NACAE9PAV3 2078 aa7.57□□□□□ -1.2
HMGN1-215ENST00000485550 IGKV1OR2-108A0A075B7D4 117 aa7.57□□□□□ -1.2
HMGN1-215ENST00000485550 CCDC160A6NGH7 325 aa7.57□□□□□ -1.2
HMGN1-215ENST00000485550 FABP1P07148 127 aa7.57□□□□□ -1.2
HMGN1-215ENST00000485550 GATA2P23769 480 aaPredicted RBP7.57□□□□□ -1.2
HMGN1-215ENST00000485550 NUP62P37198 522 aaPredicted RBP7.57□□□□□ -1.2
HMGN1-215ENST00000485550 ATP5IP56385 69 aaPredicted RBP7.57□□□□□ -1.2
HMGN1-215ENST00000485550 AP3S2P59780 193 aa7.57□□□□□ -1.2
HMGN1-215ENST00000485550 PPP1R1AQ13522 171 aa7.57□□□□□ -1.2
HMGN1-215ENST00000485550 TRGV9Q99603 122 aa7.57□□□□□ -1.2
HMGN1-215ENST00000485550 RNF126Q9BV68 326 aa7.57□□□□□ -1.2
HMGN1-215ENST00000485550 SLC35B3Q9H1N7 401 aa7.57□□□□□ -1.2
HMGN1-215ENST00000485550 SLC25A22Q9H936 323 aa7.57□□□□□ -1.2
HMGN1-215ENST00000485550 V9GYH0 126 aa7.57□□□□□ -1.2
HMGN1-215ENST00000485550 DUXBA0A1W2PPF3 345 aa7.56□□□□□ -1.2
HMGN1-215ENST00000485550 H3BP45 60 aa7.56□□□□□ -1.2
HMGN1-215ENST00000485550 SOCS3O14543 225 aa7.56□□□□□ -1.2
HMGN1-215ENST00000485550 SYNGR2O43760 224 aa7.56□□□□□ -1.2
HMGN1-215ENST00000485550 SFT2D2O95562 160 aa7.56□□□□□ -1.2
HMGN1-215ENST00000485550 ORM2P19652 201 aa7.56□□□□□ -1.2
HMGN1-215ENST00000485550 PSMB3P49720 205 aa7.56□□□□□ -1.2
HMGN1-215ENST00000485550 ZNF79Q15937 498 aa7.56□□□□□ -1.2
HMGN1-215ENST00000485550 SPANXN5Q5MJ07 72 aa7.56□□□□□ -1.2
HMGN1-215ENST00000485550 C1orf194Q5T5A4 169 aa7.56□□□□□ -1.2
HMGN1-215ENST00000485550 FAM78BQ5VT40 261 aa7.56□□□□□ -1.2
HMGN1-215ENST00000485550 GGNBP1Q5YKI7 109 aa7.56□□□□□ -1.2
HMGN1-215ENST00000485550 IGFL4Q6B9Z1 124 aa7.56□□□□□ -1.2
HMGN1-215ENST00000485550 ZNF705AQ6ZN79 300 aaPredicted RBP7.56□□□□□ -1.2
HMGN1-215ENST00000485550 TMEM182Q6ZP80 229 aaPredicted RBP7.56□□□□□ -1.2
HMGN1-215ENST00000485550 FOXI2Q6ZQN5 318 aa7.56□□□□□ -1.2
HMGN1-215ENST00000485550 MAPKAPK5-AS1Q8N8E1 139 aa7.56□□□□□ -1.2
HMGN1-215ENST00000485550 LRTM2Q8N967 370 aa7.56□□□□□ -1.2
HMGN1-215ENST00000485550 THAP8Q8NA92 274 aa7.56□□□□□ -1.2
HMGN1-215ENST00000485550 C16orf92Q96LL3 132 aa7.56□□□□□ -1.2
HMGN1-215ENST00000485550 C20orf173Q96LM9 149 aa7.56□□□□□ -1.2
HMGN1-215ENST00000485550 RSG1Q9BU20 258 aa7.56□□□□□ -1.2
HMGN1-215ENST00000485550 ZNF98A6NK75 572 aa7.55□□□□□ -1.2
HMGN1-215ENST00000485550 ZNF705FA8MVS1 300 aaPredicted RBP7.55□□□□□ -1.2
HMGN1-215ENST00000485550 MED6O75586 246 aa7.55□□□□□ -1.2
HMGN1-215ENST00000485550 ZNF705DP0CH99 300 aaPredicted RBP7.55□□□□□ -1.2
HMGN1-215ENST00000485550 ZNF705BP0CI00 300 aaPredicted RBP7.55□□□□□ -1.2
HMGN1-215ENST00000485550 SPART-AS1P0CW21 52 aa7.55□□□□□ -1.2
HMGN1-215ENST00000485550 SLC25A6P12236 298 aa7.55□□□□□ -1.2
HMGN1-215ENST00000485550 S100A5P33763 92 aa7.55□□□□□ -1.2
HMGN1-215ENST00000485550 RPP30P78346 268 aaKnown RBP7.55□□□□□ -1.2
HMGN1-215ENST00000485550 PSG9Q00887 426 aa7.55□□□□□ -1.2
HMGN1-215ENST00000485550 EBLN2Q6P2I7 272 aa7.55□□□□□ -1.2
HMGN1-215ENST00000485550 ZNF709Q8N972 641 aa7.55□□□□□ -1.2
HMGN1-215ENST00000485550 NEU1Q99519 415 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms