RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 PKHD1L1Q86WI1 4243 aa3.52□□□□□ -1.85
PTPN4-210ENST00000485247 PGPEP1LA6NFU8 196 aa3.51□□□□□ -1.85
PTPN4-210ENST00000485247 EI24O14681 340 aa3.51□□□□□ -1.85
PTPN4-210ENST00000485247 BUB3O43684 328 aa3.51□□□□□ -1.85
PTPN4-210ENST00000485247 SCGB2A1O75556 95 aa3.51□□□□□ -1.85
PTPN4-210ENST00000485247 ADAP1O75689 374 aa3.51□□□□□ -1.85
PTPN4-210ENST00000485247 IGKV1-17P01599 117 aa3.51□□□□□ -1.85
PTPN4-210ENST00000485247 PTHLHP12272 177 aa3.51□□□□□ -1.85
PTPN4-210ENST00000485247 HIST1H1DP16402 221 aaKnown RBP3.51□□□□□ -1.85
PTPN4-210ENST00000485247 EVI2AP22794 236 aa3.51□□□□□ -1.85
PTPN4-210ENST00000485247 GADD45AP24522 165 aa3.51□□□□□ -1.85
PTPN4-210ENST00000485247 UCP1P25874 307 aa3.51□□□□□ -1.85
PTPN4-210ENST00000485247 FCGR2CP31995 323 aa3.51□□□□□ -1.85
PTPN4-210ENST00000485247 PSMB3P49720 205 aa3.51□□□□□ -1.85
PTPN4-210ENST00000485247 B2MP61769 119 aa3.51□□□□□ -1.85
PTPN4-210ENST00000485247 ERHP84090 104 aaKnown RBP3.51□□□□□ -1.85
PTPN4-210ENST00000485247 HSD17B12Q53GQ0 312 aa3.51□□□□□ -1.85
PTPN4-210ENST00000485247 SPINK9Q5DT21 86 aa3.51□□□□□ -1.85
PTPN4-210ENST00000485247 CNIH2Q6PI25 160 aa3.51□□□□□ -1.85
PTPN4-210ENST00000485247 TMEM144Q7Z5S9 345 aa3.51□□□□□ -1.85
PTPN4-210ENST00000485247 Q8WTZ3 238 aa3.51□□□□□ -1.85
PTPN4-210ENST00000485247 FCAMRQ8WWV6 532 aa3.51□□□□□ -1.85
PTPN4-210ENST00000485247 FAM3DQ96BQ1 224 aa3.51□□□□□ -1.85
PTPN4-210ENST00000485247 CENPNQ96H22 339 aaPredicted RBP3.51□□□□□ -1.85
PTPN4-210ENST00000485247 CHAC1Q9BUX1 264 aa3.51□□□□□ -1.85
PTPN4-210ENST00000485247 SLC5A7Q9GZV3 580 aa3.51□□□□□ -1.85
PTPN4-210ENST00000485247 FKBP11Q9NYL4 201 aa3.51□□□□□ -1.85
PTPN4-210ENST00000485247 DOK5Q9P104 306 aa3.51□□□□□ -1.85
PTPN4-210ENST00000485247 KLK11Q9UBX7 282 aa3.51□□□□□ -1.85
PTPN4-210ENST00000485247 RAB22AQ9UL26 194 aa3.51□□□□□ -1.85
PTPN4-210ENST00000485247 DIMT1Q9UNQ2 313 aaKnown RBP3.51□□□□□ -1.85
PTPN4-210ENST00000485247 IFITM10A6NMD0 228 aa3.5□□□□□ -1.85
PTPN4-210ENST00000485247 SOCS3O14543 225 aa3.5□□□□□ -1.85
PTPN4-210ENST00000485247 WBP4O75554 376 aaKnown RBP3.5□□□□□ -1.85
PTPN4-210ENST00000485247 IL4P05112 153 aa3.5□□□□□ -1.85
PTPN4-210ENST00000485247 CRYGDP07320 174 aa3.5□□□□□ -1.85
PTPN4-210ENST00000485247 FCGR1AP12314 374 aa3.5□□□□□ -1.85
PTPN4-210ENST00000485247 DTYMKP23919 212 aa3.5□□□□□ -1.85
PTPN4-210ENST00000485247 SNCAP37840 140 aa3.5□□□□□ -1.85
PTPN4-210ENST00000485247 OPRK1P41145 380 aa3.5□□□□□ -1.85
PTPN4-210ENST00000485247 LPAR6P43657 344 aa3.5□□□□□ -1.85
PTPN4-210ENST00000485247 TAS2R60P59551 318 aa3.5□□□□□ -1.85
PTPN4-210ENST00000485247 FXYD4P59646 89 aa3.5□□□□□ -1.85
PTPN4-210ENST00000485247 PRCDQ00LT1 54 aa3.5□□□□□ -1.85
PTPN4-210ENST00000485247 DHODHQ02127 395 aa3.5□□□□□ -1.85
PTPN4-210ENST00000485247 MSMO1Q15800 293 aa3.5□□□□□ -1.85
PTPN4-210ENST00000485247 HES5Q5TA89 166 aa3.5□□□□□ -1.85
PTPN4-210ENST00000485247 LYPD5Q6UWN5 251 aa3.5□□□□□ -1.85
PTPN4-210ENST00000485247 ZNF818PQ6ZRF7 136 aa3.5□□□□□ -1.85
PTPN4-210ENST00000485247 WFDC10BQ8IUB3 73 aa3.5□□□□□ -1.85
PTPN4-210ENST00000485247 LINC00612Q8N6U2 182 aa3.5□□□□□ -1.85
PTPN4-210ENST00000485247 TSPAN14Q8NG11 270 aa3.5□□□□□ -1.85
PTPN4-210ENST00000485247 OR4X1Q8NH49 305 aa3.5□□□□□ -1.85
PTPN4-210ENST00000485247 TMEM203Q969S6 136 aa3.5□□□□□ -1.85
PTPN4-210ENST00000485247 GPR146Q96CH1 333 aa3.5□□□□□ -1.85
PTPN4-210ENST00000485247 TMEM80Q96HE8 168 aa3.5□□□□□ -1.85
PTPN4-210ENST00000485247 LINC00467Q9BRT7 94 aa3.5□□□□□ -1.85
PTPN4-210ENST00000485247 ANXA10Q9UJ72 324 aa3.5□□□□□ -1.85
PTPN4-210ENST00000485247 DNAH8Q96JB1 4490 aa3.49□□□□□ -1.85
PTPN4-210ENST00000485247 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.49□□□□□ -1.85
PTPN4-210ENST00000485247 TRAV30A0A087WSZ9 112 aa3.49□□□□□ -1.85
PTPN4-210ENST00000485247 IRGMA1A4Y4 181 aa3.49□□□□□ -1.85
PTPN4-210ENST00000485247 ZNF98A6NK75 572 aa3.49□□□□□ -1.85
PTPN4-210ENST00000485247 GYG2O15488 501 aa3.49□□□□□ -1.85
PTPN4-210ENST00000485247 GSTZ1O43708 216 aaPredicted RBP3.49□□□□□ -1.85
PTPN4-210ENST00000485247 PPYP01298 95 aa3.49□□□□□ -1.85
PTPN4-210ENST00000485247 RLN2P04090 185 aa3.49□□□□□ -1.85
PTPN4-210ENST00000485247 RLN1P04808 185 aa3.49□□□□□ -1.85
PTPN4-210ENST00000485247 F2RP25116 425 aa3.49□□□□□ -1.85
PTPN4-210ENST00000485247 CNN1P51911 297 aaKnown RBP3.49□□□□□ -1.85
PTPN4-210ENST00000485247 ACOT6Q3I5F7 207 aaPredicted RBP3.49□□□□□ -1.85
PTPN4-210ENST00000485247 CDNFQ49AH0 187 aa3.49□□□□□ -1.85
PTPN4-210ENST00000485247 HACD4Q5VWC8 232 aa3.49□□□□□ -1.85
PTPN4-210ENST00000485247 ZNF493Q6ZR52 646 aa3.49□□□□□ -1.85
PTPN4-210ENST00000485247 GPR141Q7Z602 305 aa3.49□□□□□ -1.85
PTPN4-210ENST00000485247 TBC1D26Q86UD7 250 aa3.49□□□□□ -1.85
PTPN4-210ENST00000485247 NOXA1Q86UR1 476 aa3.49□□□□□ -1.85
PTPN4-210ENST00000485247 TMEM17Q86X19 198 aa3.49□□□□□ -1.85
PTPN4-210ENST00000485247 MS4A15Q8N5U1 240 aa3.49□□□□□ -1.85
PTPN4-210ENST00000485247 OR11H7Q8NGC8 314 aa3.49□□□□□ -1.85
PTPN4-210ENST00000485247 OR4A16Q8NH70 328 aa3.49□□□□□ -1.85
PTPN4-210ENST00000485247 RNASE8Q8TDE3 154 aaKnown RBP3.49□□□□□ -1.85
PTPN4-210ENST00000485247 RBPMSQ93062 196 aaKnown RBP3.49□□□□□ -1.85
PTPN4-210ENST00000485247 TSC22D3Q99576 134 aa3.49□□□□□ -1.85
PTPN4-210ENST00000485247 SLC25A39Q9BZJ4 359 aaPredicted RBP3.49□□□□□ -1.85
PTPN4-210ENST00000485247 RPRMQ9NS64 109 aa3.49□□□□□ -1.85
PTPN4-210ENST00000485247 ICOSQ9Y6W8 199 aa3.49□□□□□ -1.85
PTPN4-210ENST00000485247 A0A0U1RQV1 116 aa3.48□□□□□ -1.85
PTPN4-210ENST00000485247 LOC100130705A0A1B0GUX0 176 aa3.48□□□□□ -1.85
PTPN4-210ENST00000485247 TMEM235A6NFC5 223 aa3.48□□□□□ -1.85
PTPN4-210ENST00000485247 EFCAB10A6NFE3 127 aa3.48□□□□□ -1.85
PTPN4-210ENST00000485247 ERICH4A6NGS2 130 aa3.48□□□□□ -1.85
PTPN4-210ENST00000485247 A8MTW9 85 aa3.48□□□□□ -1.85
PTPN4-210ENST00000485247 K7EP13 123 aa3.48□□□□□ -1.85
PTPN4-210ENST00000485247 CORTO00230 105 aa3.48□□□□□ -1.85
PTPN4-210ENST00000485247 ISLRO14498 428 aa3.48□□□□□ -1.85
PTPN4-210ENST00000485247 MYL12BO14950 172 aa3.48□□□□□ -1.85
PTPN4-210ENST00000485247 LECT2O14960 151 aa3.48□□□□□ -1.85
PTPN4-210ENST00000485247 IGLV2-11P01706 119 aa3.48□□□□□ -1.85
PTPN4-210ENST00000485247 UCHL1P09936 223 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms