RNA–Protein interactions for RNA: ENST00000485149.1

SORT1-206, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 442 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-206ENST00000485149 ZNF726P1Q15940 193 aa4.78□□□□□ -1.64
SORT1-206ENST00000485149 ZNF260Q3ZCT1 412 aa4.78□□□□□ -1.64
SORT1-206ENST00000485149 TMEM97Q5BJF2 176 aa4.78□□□□□ -1.64
SORT1-206ENST00000485149 C9orf66Q5T8R8 295 aa4.78□□□□□ -1.64
SORT1-206ENST00000485149 COMMD7Q86VX2 200 aa4.78□□□□□ -1.64
SORT1-206ENST00000485149 SAMD12Q8N8I0 201 aa4.78□□□□□ -1.64
SORT1-206ENST00000485149 LHFPL5Q8TAF8 219 aa4.78□□□□□ -1.64
SORT1-206ENST00000485149 STOML3Q8TAV4 291 aa4.78□□□□□ -1.64
SORT1-206ENST00000485149 PTX4Q96A99 478 aa4.78□□□□□ -1.64
SORT1-206ENST00000485149 SLC25A38Q96DW6 304 aa4.78□□□□□ -1.64
SORT1-206ENST00000485149 BIN3Q9NQY0 253 aa4.78□□□□□ -1.64
SORT1-206ENST00000485149 COMMD3Q9UBI1 195 aa4.78□□□□□ -1.64
SORT1-206ENST00000485149 RSL24D1Q9UHA3 163 aaKnown RBP4.78□□□□□ -1.64
SORT1-206ENST00000485149 ZNF256Q9Y2P7 627 aaPredicted RBP4.78□□□□□ -1.64
SORT1-206ENST00000485149 SELENOKQ9Y6D0 94 aa4.78□□□□□ -1.64
SORT1-206ENST00000485149 SAA2-SAA4A0A096LPE2 208 aa4.77□□□□□ -1.65
SORT1-206ENST00000485149 IGLV9-49A0A0B4J1Y8 123 aa4.77□□□□□ -1.65
SORT1-206ENST00000485149 FAM240AA0A1B0GVK7 77 aa4.77□□□□□ -1.65
SORT1-206ENST00000485149 PPP5D1E7EU14 171 aa4.77□□□□□ -1.65
SORT1-206ENST00000485149 GPR31O00270 319 aa4.77□□□□□ -1.65
SORT1-206ENST00000485149 GAGE7O76087 117 aa4.77□□□□□ -1.65
SORT1-206ENST00000485149 GABARAPO95166 117 aa4.77□□□□□ -1.65
SORT1-206ENST00000485149 NDUFB8O95169 186 aa4.77□□□□□ -1.65
SORT1-206ENST00000485149 IFNA1P01562 189 aa4.77□□□□□ -1.65
SORT1-206ENST00000485149 GIPP09681 153 aaPredicted RBP4.77□□□□□ -1.65
SORT1-206ENST00000485149 FRMD6-AS1P0C7T7 363 aa4.77□□□□□ -1.65
SORT1-206ENST00000485149 GAGE12FP0CL80 117 aa4.77□□□□□ -1.65
SORT1-206ENST00000485149 GAGE12GP0CL81 117 aa4.77□□□□□ -1.65
SORT1-206ENST00000485149 GAGE12IP0CL82 117 aa4.77□□□□□ -1.65
SORT1-206ENST00000485149 SAA2P0DJI9 122 aaPredicted RBP4.77□□□□□ -1.65
SORT1-206ENST00000485149 NFYAP23511 347 aaPredicted RBP4.77□□□□□ -1.65
SORT1-206ENST00000485149 IL3RAP26951 378 aa4.77□□□□□ -1.65
SORT1-206ENST00000485149 RORCP51449 518 aa4.77□□□□□ -1.65
SORT1-206ENST00000485149 CCR6P51684 374 aa4.77□□□□□ -1.65
SORT1-206ENST00000485149 GAGE4Q13068 117 aa4.77□□□□□ -1.65
SORT1-206ENST00000485149 EBI3Q14213 229 aa4.77□□□□□ -1.65
SORT1-206ENST00000485149 SPSB3Q6PJ21 355 aa4.77□□□□□ -1.65
SORT1-206ENST00000485149 Q6ZVH6 145 aa4.77□□□□□ -1.65
SORT1-206ENST00000485149 ZNF329Q86UD4 541 aa4.77□□□□□ -1.65
SORT1-206ENST00000485149 OR2T10Q8NGZ9 312 aa4.77□□□□□ -1.65
SORT1-206ENST00000485149 ACOT12Q8WYK0 555 aa4.77□□□□□ -1.65
SORT1-206ENST00000485149 S100A16Q96FQ6 103 aaKnown RBP4.77□□□□□ -1.65
SORT1-206ENST00000485149 NABP2Q9BQ15 211 aa4.77□□□□□ -1.65
SORT1-206ENST00000485149 QTRT1Q9BXR0 403 aaKnown RBP4.77□□□□□ -1.65
SORT1-206ENST00000485149 MRPL20Q9BYC9 149 aaKnown RBP4.77□□□□□ -1.65
SORT1-206ENST00000485149 KRTAP9-3Q9BYQ3 159 aa4.77□□□□□ -1.65
SORT1-206ENST00000485149 DCSTAMPQ9H295 470 aa4.77□□□□□ -1.65
SORT1-206ENST00000485149 IFI27L2Q9H2X8 130 aa4.77□□□□□ -1.65
SORT1-206ENST00000485149 EHFQ9NZC4 300 aa4.77□□□□□ -1.65
SORT1-206ENST00000485149 PRO0628Q9UI54 55 aa4.77□□□□□ -1.65
SORT1-206ENST00000485149 JPT1Q9UK76 154 aa4.77□□□□□ -1.65
SORT1-206ENST00000485149 PRELID3BQ9Y3B1 194 aa4.77□□□□□ -1.65
SORT1-206ENST00000485149 PLECQ15149 4684 aaKnown RBP4.76□□□□□ -1.65
SORT1-206ENST00000485149 TRBV6-7A0A0A0MS04 114 aa4.76□□□□□ -1.65
SORT1-206ENST00000485149 F6UB75 175 aa4.76□□□□□ -1.65
SORT1-206ENST00000485149 RGS5O15539 181 aa4.76□□□□□ -1.65
SORT1-206ENST00000485149 MT-CO2P00403 227 aa4.76□□□□□ -1.65
SORT1-206ENST00000485149 MOSP00540 346 aa4.76□□□□□ -1.65
SORT1-206ENST00000485149 EIF4EP06730 217 aaKnown RBP4.76□□□□□ -1.65
SORT1-206ENST00000485149 ELK1P19419 428 aa4.76□□□□□ -1.65
SORT1-206ENST00000485149 HNRNPA3P51991 378 aaKnown RBP4.76□□□□□ -1.65
SORT1-206ENST00000485149 GNG2P59768 71 aa4.76□□□□□ -1.65
SORT1-206ENST00000485149 RAB2AP61019 212 aa4.76□□□□□ -1.65
SORT1-206ENST00000485149 HERV-K104P61576 105 aa4.76□□□□□ -1.65
SORT1-206ENST00000485149 RPL24P83731 157 aaKnown RBP4.76□□□□□ -1.65
SORT1-206ENST00000485149 C1orf195Q5TG92 126 aa4.76□□□□□ -1.65
SORT1-206ENST00000485149 ZNF833PQ6ZTB9 187 aa4.76□□□□□ -1.65
SORT1-206ENST00000485149 FAM231DQ6ZW35 169 aa4.76□□□□□ -1.65
SORT1-206ENST00000485149 EIF4E3Q8N5X7 224 aaKnown RBP4.76□□□□□ -1.65
SORT1-206ENST00000485149 Q8N6K4 173 aa4.76□□□□□ -1.65
SORT1-206ENST00000485149 C5orf56Q8N8D9 126 aa4.76□□□□□ -1.65
SORT1-206ENST00000485149 Q8N9W7 124 aa4.76□□□□□ -1.65
SORT1-206ENST00000485149 MARC2Q969Z3 335 aa4.76□□□□□ -1.65
SORT1-206ENST00000485149 SLC25A46Q96AG3 418 aa4.76□□□□□ -1.65
SORT1-206ENST00000485149 BTF3L4Q96K17 158 aa4.76□□□□□ -1.65
SORT1-206ENST00000485149 TM2D3Q9BRN9 247 aa4.76□□□□□ -1.65
SORT1-206ENST00000485149 ARV1Q9H2C2 271 aa4.76□□□□□ -1.65
SORT1-206ENST00000485149 HSPB11Q9Y547 144 aa4.76□□□□□ -1.65
SORT1-206ENST00000485149 RBM7Q9Y580 266 aaKnown RBP4.76□□□□□ -1.65
SORT1-206ENST00000485149 IGKV1D-13A0A0B4J2D9 117 aa4.75□□□□□ -1.65
SORT1-206ENST00000485149 FAM25AB3EWG3 89 aa4.75□□□□□ -1.65
SORT1-206ENST00000485149 FAM25CB3EWG5 89 aa4.75□□□□□ -1.65
SORT1-206ENST00000485149 FAM25GB3EWG6 89 aa4.75□□□□□ -1.65
SORT1-206ENST00000485149 M0R1X1 148 aa4.75□□□□□ -1.65
SORT1-206ENST00000485149 HPRT1P00492 218 aa4.75□□□□□ -1.65
SORT1-206ENST00000485149 HLA-DQB1P01920 261 aa4.75□□□□□ -1.65
SORT1-206ENST00000485149 OR10J4P0C629 311 aa4.75□□□□□ -1.65
SORT1-206ENST00000485149 IGKV1-13P0DP09 117 aa4.75□□□□□ -1.65
SORT1-206ENST00000485149 GPR183P32249 361 aa4.75□□□□□ -1.65
SORT1-206ENST00000485149 GPX4P36969 197 aaPredicted RBP4.75□□□□□ -1.65
SORT1-206ENST00000485149 RFX2P48378 723 aa4.75□□□□□ -1.65
SORT1-206ENST00000485149 ZNF137PP52743 207 aa4.75□□□□□ -1.65
SORT1-206ENST00000485149 SMAGPQ0VAQ4 97 aa4.75□□□□□ -1.65
SORT1-206ENST00000485149 IZUMO4Q1ZYL8 232 aa4.75□□□□□ -1.65
SORT1-206ENST00000485149 TMEM30BQ3MIR4 351 aa4.75□□□□□ -1.65
SORT1-206ENST00000485149 UBE2NLQ5JXB2 153 aa4.75□□□□□ -1.65
SORT1-206ENST00000485149 LCE5AQ5TCM9 118 aa4.75□□□□□ -1.65
SORT1-206ENST00000485149 ZNF57Q68EA5 555 aaPredicted RBP4.75□□□□□ -1.65
SORT1-206ENST00000485149 CNIH2Q6PI25 160 aa4.75□□□□□ -1.65
SORT1-206ENST00000485149 C18orf65Q6ZTR6 163 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms