RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 EFCAB11Q9BUY7 163 aa2□□□□□ -2.09
VPS13A-211ENST00000484581 BCL2L10Q9HD36 194 aa2□□□□□ -2.09
VPS13A-211ENST00000484581 NUP210LQ5VU65 1888 aa2□□□□□ -2.09
VPS13A-211ENST00000484581 ZFHX2Q9C0A1 2572 aaPredicted RBP2□□□□□ -2.09
VPS13A-211ENST00000484581 PRORSD1PA6NEY8 169 aa1.99□□□□□ -2.09
VPS13A-211ENST00000484581 A8MWV9 139 aa1.99□□□□□ -2.09
VPS13A-211ENST00000484581 F8W036 122 aa1.99□□□□□ -2.09
VPS13A-211ENST00000484581 AKR1C3P42330 323 aa1.99□□□□□ -2.09
VPS13A-211ENST00000484581 PLCXD2Q0VAA5 305 aa1.99□□□□□ -2.09
VPS13A-211ENST00000484581 EIF5AL1Q6IS14 154 aaKnown RBP1.99□□□□□ -2.09
VPS13A-211ENST00000484581 SKA2Q8WVK7 121 aaPredicted RBP1.99□□□□□ -2.09
VPS13A-211ENST00000484581 ISOC1Q96CN7 298 aa1.99□□□□□ -2.09
VPS13A-211ENST00000484581 CARD19Q96LW7 228 aa1.99□□□□□ -2.09
VPS13A-211ENST00000484581 SLC50A1Q9BRV3 221 aa1.99□□□□□ -2.09
VPS13A-211ENST00000484581 NPCDR1Q9BY65 106 aa1.99□□□□□ -2.09
VPS13A-211ENST00000484581 LRTM1Q9HBL6 345 aa1.99□□□□□ -2.09
VPS13A-211ENST00000484581 HS3ST2Q9Y278 367 aa1.99□□□□□ -2.09
VPS13A-211ENST00000484581 HSPB11Q9Y547 144 aa1.99□□□□□ -2.09
VPS13A-211ENST00000484581 DOCK10Q96BY6 2186 aa1.99□□□□□ -2.09
VPS13A-211ENST00000484581 BAZ2BQ9UIF8 2168 aaKnown RBP1.99□□□□□ -2.09
VPS13A-211ENST00000484581 SETD5Q9C0A6 1442 aa1.99□□□□□ -2.09
VPS13A-211ENST00000484581 TRAV5A0A0B4J249 113 aa1.98□□□□□ -2.09
VPS13A-211ENST00000484581 ESRGQ1W209 222 aa1.98□□□□□ -2.09
VPS13A-211ENST00000484581 SOSTDC1Q6X4U4 206 aa1.98□□□□□ -2.09
VPS13A-211ENST00000484581 CROCCP2Q86T23 111 aa1.98□□□□□ -2.09
VPS13A-211ENST00000484581 OR9Q1Q8NGQ5 310 aa1.98□□□□□ -2.09
VPS13A-211ENST00000484581 SLC25A21Q9BQT8 299 aaPredicted RBP1.98□□□□□ -2.09
VPS13A-211ENST00000484581 LINC00467Q9BRT7 94 aa1.98□□□□□ -2.09
VPS13A-211ENST00000484581 GINS2Q9Y248 185 aa1.98□□□□□ -2.09
VPS13A-211ENST00000484581 LAMTOR2Q9Y2Q5 125 aa1.98□□□□□ -2.09
VPS13A-211ENST00000484581 BAHCC1Q9P281 2608 aa1.98□□□□□ -2.09
VPS13A-211ENST00000484581 GLI3P10071 1580 aa1.98□□□□□ -2.09
VPS13A-211ENST00000484581 ANAPC1Q9H1A4 1944 aa1.97□□□□□ -2.09
VPS13A-211ENST00000484581 NUP98P52948 1817 aa1.97□□□□□ -2.09
VPS13A-211ENST00000484581 GPX1P07203 203 aa1.97□□□□□ -2.09
VPS13A-211ENST00000484581 MGST1P10620 155 aaKnown RBP1.97□□□□□ -2.09
VPS13A-211ENST00000484581 DEFB103AP81534 67 aa1.97□□□□□ -2.09
VPS13A-211ENST00000484581 RHOGP84095 191 aa1.97□□□□□ -2.09
VPS13A-211ENST00000484581 ALX1Q15699 326 aa1.97□□□□□ -2.09
VPS13A-211ENST00000484581 KRTAP13-4Q3LI77 160 aa1.97□□□□□ -2.09
VPS13A-211ENST00000484581 SAMD13Q5VXD3 122 aa1.97□□□□□ -2.09
VPS13A-211ENST00000484581 Q6ZRN7 208 aaPredicted RBP1.97□□□□□ -2.09
VPS13A-211ENST00000484581 PHF5AQ7RTV0 110 aaKnown RBP1.97□□□□□ -2.09
VPS13A-211ENST00000484581 COA5Q86WW8 74 aa1.97□□□□□ -2.09
VPS13A-211ENST00000484581 ANGPTL5Q86XS5 388 aa1.97□□□□□ -2.09
VPS13A-211ENST00000484581 PRR15Q8IV56 129 aa1.97□□□□□ -2.09
VPS13A-211ENST00000484581 IFT20Q8IY31 132 aa1.97□□□□□ -2.09
VPS13A-211ENST00000484581 THEM6Q8WUY1 208 aa1.97□□□□□ -2.09
VPS13A-211ENST00000484581 ADAT1Q9BUB4 502 aaKnown RBP1.97□□□□□ -2.09
VPS13A-211ENST00000484581 BRWD1Q9NSI6 2320 aa1.96□□□□□ -2.1
VPS13A-211ENST00000484581 TAF1LQ8IZX4 1826 aa1.96□□□□□ -2.1
VPS13A-211ENST00000484581 CAMSAP2Q08AD1 1489 aa1.96□□□□□ -2.1
VPS13A-211ENST00000484581 TRAV3A0A0B4J244 114 aa1.96□□□□□ -2.1
VPS13A-211ENST00000484581 TRAV1-1A0A0B4J248 108 aa1.96□□□□□ -2.1
VPS13A-211ENST00000484581 LOC105371267A0A1B0GV96 52 aa1.96□□□□□ -2.1
VPS13A-211ENST00000484581 TIMM17BO60830 172 aa1.96□□□□□ -2.1
VPS13A-211ENST00000484581 PROSCO94903 275 aa1.96□□□□□ -2.1
VPS13A-211ENST00000484581 UBL3O95164 117 aa1.96□□□□□ -2.1
VPS13A-211ENST00000484581 FAM107AO95990 144 aa1.96□□□□□ -2.1
VPS13A-211ENST00000484581 BCL2P10415 239 aa1.96□□□□□ -2.1
VPS13A-211ENST00000484581 GPX2P18283 190 aa1.96□□□□□ -2.1
VPS13A-211ENST00000484581 TMBIM6P55061 237 aa1.96□□□□□ -2.1
VPS13A-211ENST00000484581 ARPP19P56211 112 aa1.96□□□□□ -2.1
VPS13A-211ENST00000484581 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
VPS13A-211ENST00000484581 C12orf29Q8N999 325 aa1.96□□□□□ -2.1
VPS13A-211ENST00000484581 ZNF418Q8TF45 676 aaPredicted RBP1.96□□□□□ -2.1
VPS13A-211ENST00000484581 BORCS8Q96FH0 119 aa1.96□□□□□ -2.1
VPS13A-211ENST00000484581 BATF3Q9NR55 127 aa1.96□□□□□ -2.1
VPS13A-211ENST00000484581 OTORQ9NRC9 128 aa1.96□□□□□ -2.1
VPS13A-211ENST00000484581 SPANXA1Q9NS26 97 aa1.96□□□□□ -2.1
VPS13A-211ENST00000484581 RNF11Q9Y3C5 154 aa1.96□□□□□ -2.1
VPS13A-211ENST00000484581 ADGBQ8N7X0 1667 aa1.96□□□□□ -2.1
VPS13A-211ENST00000484581 DIDO1Q9BTC0 2240 aaKnown RBP1.95□□□□□ -2.1
VPS13A-211ENST00000484581 VWDEQ8N2E2 1590 aa1.95□□□□□ -2.1
VPS13A-211ENST00000484581 TECPR2O15040 1411 aa1.95□□□□□ -2.1
VPS13A-211ENST00000484581 CD109Q6YHK3 1445 aa1.95□□□□□ -2.1
VPS13A-211ENST00000484581 TRDV1A0A1B0GX56 115 aa1.95□□□□□ -2.1
VPS13A-211ENST00000484581 CST7O76096 145 aa1.95□□□□□ -2.1
VPS13A-211ENST00000484581 GADD45GO95257 159 aa1.95□□□□□ -2.1
VPS13A-211ENST00000484581 CRPP02741 224 aa1.95□□□□□ -2.1
VPS13A-211ENST00000484581 CXCL1P09341 107 aa1.95□□□□□ -2.1
VPS13A-211ENST00000484581 ASAH2BP0C7U1 165 aa1.95□□□□□ -2.1
VPS13A-211ENST00000484581 ZNF705BP0CI00 300 aaPredicted RBP1.95□□□□□ -2.1
VPS13A-211ENST00000484581 SURF2Q15527 256 aaPredicted RBP1.95□□□□□ -2.1
VPS13A-211ENST00000484581 MSMO1Q15800 293 aa1.95□□□□□ -2.1
VPS13A-211ENST00000484581 RNASE10Q5GAN6 216 aaKnown RBP1.95□□□□□ -2.1
VPS13A-211ENST00000484581 FP248Q71RG6 208 aaPredicted RBP1.95□□□□□ -2.1
VPS13A-211ENST00000484581 Q8IYB0 196 aa1.95□□□□□ -2.1
VPS13A-211ENST00000484581 C14orf132Q9NPU4 83 aa1.95□□□□□ -2.1
VPS13A-211ENST00000484581 ASB4Q9Y574 426 aa1.95□□□□□ -2.1
VPS13A-211ENST00000484581 CEP164Q9UPV0 1460 aa1.94□□□□□ -2.1
VPS13A-211ENST00000484581 NUP210Q8TEM1 1887 aaPredicted RBP1.94□□□□□ -2.1
VPS13A-211ENST00000484581 ODAMA1E959 279 aa1.94□□□□□ -2.1
VPS13A-211ENST00000484581 H7BYZ3 331 aa1.94□□□□□ -2.1
VPS13A-211ENST00000484581 SSR2P43308 183 aa1.94□□□□□ -2.1
VPS13A-211ENST00000484581 HBBP68871 147 aa1.94□□□□□ -2.1
VPS13A-211ENST00000484581 PCOTHQ58A44 107 aa1.94□□□□□ -2.1
VPS13A-211ENST00000484581 PATE2Q6UY27 113 aa1.94□□□□□ -2.1
VPS13A-211ENST00000484581 RPS19BP1Q86WX3 136 aaKnown RBP1.94□□□□□ -2.1
VPS13A-211ENST00000484581 LINC00311Q8N616 119 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms