RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 PFDN6O15212 129 aa-0.25□□□□□ -2.45
CCDC66-219ENST00000484441 DPPA3Q6W0C5 159 aa-0.25□□□□□ -2.45
CCDC66-219ENST00000484441 IQCF2Q8IXL9 164 aa-0.25□□□□□ -2.45
CCDC66-219ENST00000484441 OR13C4Q8NGS5 318 aa-0.25□□□□□ -2.45
CCDC66-219ENST00000484441 TERB2Q8NHR7 220 aa-0.25□□□□□ -2.45
CCDC66-219ENST00000484441 PATE1Q8WXA2 126 aa-0.25□□□□□ -2.45
CCDC66-219ENST00000484441 MT1LQ93083 61 aa-0.25□□□□□ -2.45
CCDC66-219ENST00000484441 PPP1R14BQ96C90 147 aa-0.25□□□□□ -2.45
CCDC66-219ENST00000484441 CMTM5Q96DZ9 223 aa-0.25□□□□□ -2.45
CCDC66-219ENST00000484441 C3orf18Q9UK00 162 aa-0.25□□□□□ -2.45
CCDC66-219ENST00000484441 MTUS2Q5JR59 1369 aa-0.25□□□□□ -2.45
CCDC66-219ENST00000484441 ABCC11Q96J66 1382 aa-0.25□□□□□ -2.45
CCDC66-219ENST00000484441 CDK13Q14004 1512 aaKnown RBP-0.25□□□□□ -2.45
CCDC66-219ENST00000484441 KDM5CP41229 1560 aa-0.25□□□□□ -2.45
CCDC66-219ENST00000484441 KIAA1549Q9HCM3 1950 aa-0.25□□□□□ -2.45
CCDC66-219ENST00000484441 TET1Q8NFU7 2136 aa-0.25□□□□□ -2.45
CCDC66-219ENST00000484441 GOLGA4Q13439 2230 aaKnown RBP-0.25□□□□□ -2.45
CCDC66-219ENST00000484441 FREM3P0C091 2139 aa-0.26□□□□□ -2.45
CCDC66-219ENST00000484441 ZGRF1Q86YA3 2104 aa-0.26□□□□□ -2.45
CCDC66-219ENST00000484441 HMGXB3Q12766 1538 aa-0.26□□□□□ -2.45
CCDC66-219ENST00000484441 MAGI2Q86UL8 1455 aa-0.26□□□□□ -2.45
CCDC66-219ENST00000484441 LINC00854A0A1B0GVQ3 168 aa-0.26□□□□□ -2.45
CCDC66-219ENST00000484441 EVPLLA8MZ36 301 aa-0.26□□□□□ -2.45
CCDC66-219ENST00000484441 ZNF736B4DX44 427 aaPredicted RBP-0.26□□□□□ -2.45
CCDC66-219ENST00000484441 C10orf142B7Z368 130 aa-0.26□□□□□ -2.45
CCDC66-219ENST00000484441 GOLGA8KD6RF30 607 aa-0.26□□□□□ -2.45
CCDC66-219ENST00000484441 UBE2G2P60604 165 aa-0.26□□□□□ -2.45
CCDC66-219ENST00000484441 PSG9Q00887 426 aa-0.26□□□□□ -2.45
CCDC66-219ENST00000484441 ASB16-AS1Q495Z4 193 aa-0.26□□□□□ -2.45
CCDC66-219ENST00000484441 COQ5Q5HYK3 327 aa-0.26□□□□□ -2.45
CCDC66-219ENST00000484441 LPCAT4Q643R3 524 aa-0.26□□□□□ -2.45
CCDC66-219ENST00000484441 Q6ZS49 121 aa-0.26□□□□□ -2.45
CCDC66-219ENST00000484441 SLC30A7Q8NEW0 376 aa-0.26□□□□□ -2.45
CCDC66-219ENST00000484441 OR5A1Q8NGJ0 315 aa-0.26□□□□□ -2.45
CCDC66-219ENST00000484441 MRPL30Q8TCC3 161 aaKnown RBP-0.26□□□□□ -2.45
CCDC66-219ENST00000484441 TMEM147Q9BVK8 224 aa-0.26□□□□□ -2.45
CCDC66-219ENST00000484441 IMUPQ9GZP8 106 aa-0.26□□□□□ -2.45
CCDC66-219ENST00000484441 TP73-AS1Q9UF72 201 aa-0.26□□□□□ -2.45
CCDC66-219ENST00000484441 TANC2Q9HCD6 1990 aa-0.26□□□□□ -2.45
CCDC66-219ENST00000484441 KIF13BQ9NQT8 1826 aa-0.27□□□□□ -2.45
CCDC66-219ENST00000484441 MIA2Q96PC5 1412 aa-0.27□□□□□ -2.45
CCDC66-219ENST00000484441 PIN1P1O15428 100 aa-0.27□□□□□ -2.45
CCDC66-219ENST00000484441 CALUO43852 315 aaPredicted RBP-0.27□□□□□ -2.45
CCDC66-219ENST00000484441 UCHL3P15374 230 aa-0.27□□□□□ -2.45
CCDC66-219ENST00000484441 MYL12AP19105 171 aa-0.27□□□□□ -2.45
CCDC66-219ENST00000484441 RPS29P62273 56 aaKnown RBP-0.27□□□□□ -2.45
CCDC66-219ENST00000484441 MLLT11Q13015 90 aaPredicted RBP-0.27□□□□□ -2.45
CCDC66-219ENST00000484441 RNASE10Q5GAN6 216 aaKnown RBP-0.27□□□□□ -2.45
CCDC66-219ENST00000484441 CLVS2Q5SYC1 327 aa-0.27□□□□□ -2.45
CCDC66-219ENST00000484441 Q5VV11 94 aa-0.27□□□□□ -2.45
CCDC66-219ENST00000484441 COX6B2Q6YFQ2 88 aa-0.27□□□□□ -2.45
CCDC66-219ENST00000484441 ZCCHC23Q6ZST2 131 aa-0.27□□□□□ -2.45
CCDC66-219ENST00000484441 MIR17HGQ75NE6 70 aa-0.27□□□□□ -2.45
CCDC66-219ENST00000484441 BPIFA4PQ86YQ2 179 aa-0.27□□□□□ -2.45
CCDC66-219ENST00000484441 C3orf56Q8N813 242 aa-0.27□□□□□ -2.45
CCDC66-219ENST00000484441 DEFB104AQ8WTQ1 72 aa-0.27□□□□□ -2.45
CCDC66-219ENST00000484441 PRRT1Q99946 306 aa-0.27□□□□□ -2.45
CCDC66-219ENST00000484441 GINS4Q9BRT9 223 aa-0.27□□□□□ -2.45
CCDC66-219ENST00000484441 CITO14578 2027 aa-0.27□□□□□ -2.45
CCDC66-219ENST00000484441 PAPPAQ13219 1627 aa-0.27□□□□□ -2.45
CCDC66-219ENST00000484441 SSC5DA1L4H1 1573 aa-0.28□□□□□ -2.45
CCDC66-219ENST00000484441 MYO18AQ92614 2054 aaKnown RBP-0.28□□□□□ -2.45
CCDC66-219ENST00000484441 ADGRL2O95490 1459 aa-0.28□□□□□ -2.45
CCDC66-219ENST00000484441 IQSEC2Q5JU85 1478 aa-0.28□□□□□ -2.45
CCDC66-219ENST00000484441 VIRMAQ69YN4 1812 aaKnown RBP-0.28□□□□□ -2.45
CCDC66-219ENST00000484441 SPAARA0A1B0GVQ0 90 aa-0.28□□□□□ -2.45
CCDC66-219ENST00000484441 CCL25O15444 150 aa-0.28□□□□□ -2.45
CCDC66-219ENST00000484441 NAA20P61599 178 aa-0.28□□□□□ -2.45
CCDC66-219ENST00000484441 MED21Q13503 144 aa-0.28□□□□□ -2.45
CCDC66-219ENST00000484441 KRTAP19-5Q3LI72 72 aa-0.28□□□□□ -2.45
CCDC66-219ENST00000484441 Q5BKY6 102 aa-0.28□□□□□ -2.45
CCDC66-219ENST00000484441 TEX261Q6UWH6 196 aa-0.28□□□□□ -2.45
CCDC66-219ENST00000484441 PLEKHG7Q6ZR37 379 aa-0.28□□□□□ -2.45
CCDC66-219ENST00000484441 CLVS1Q8IUQ0 354 aaPredicted RBP-0.28□□□□□ -2.45
CCDC66-219ENST00000484441 LRRC25Q8N386 305 aaPredicted RBP-0.28□□□□□ -2.45
CCDC66-219ENST00000484441 OR10J5Q8NHC4 309 aa-0.28□□□□□ -2.45
CCDC66-219ENST00000484441 CANT1Q8WVQ1 401 aa-0.28□□□□□ -2.45
CCDC66-219ENST00000484441 C4orf3Q8WVX3 66 aa-0.28□□□□□ -2.45
CCDC66-219ENST00000484441 LIMD2Q9BT23 127 aa-0.28□□□□□ -2.45
CCDC66-219ENST00000484441 HS3ST2Q9Y278 367 aa-0.28□□□□□ -2.45
CCDC66-219ENST00000484441 U3KQ87 197 aa-0.28□□□□□ -2.45
CCDC66-219ENST00000484441 TIAM2Q8IVF5 1701 aa-0.28□□□□□ -2.45
CCDC66-219ENST00000484441 FMN2Q9NZ56 1722 aa-0.28□□□□□ -2.45
CCDC66-219ENST00000484441 CHD3Q12873 2000 aaKnown RBP-0.28□□□□□ -2.45
CCDC66-219ENST00000484441 ERCC6L2Q5T890 1561 aa-0.28□□□□□ -2.45
CCDC66-219ENST00000484441 MYLKQ15746 1914 aa-0.28□□□□□ -2.46
CCDC66-219ENST00000484441 MBD5Q9P267 1494 aa-0.29□□□□□ -2.46
CCDC66-219ENST00000484441 BCL9O00512 1426 aa-0.29□□□□□ -2.46
CCDC66-219ENST00000484441 KNDC1Q76NI1 1749 aa-0.29□□□□□ -2.46
CCDC66-219ENST00000484441 PIK3C2AO00443 1686 aa-0.29□□□□□ -2.46
CCDC66-219ENST00000484441 A0A1B0GV50 99 aa-0.29□□□□□ -2.46
CCDC66-219ENST00000484441 K7EQZ3 153 aa-0.29□□□□□ -2.46
CCDC66-219ENST00000484441 DEFB4AO15263 64 aa-0.29□□□□□ -2.46
CCDC66-219ENST00000484441 OR2B3O76000 313 aa-0.29□□□□□ -2.46
CCDC66-219ENST00000484441 TCL1BO95988 128 aa-0.29□□□□□ -2.46
CCDC66-219ENST00000484441 SPINK1P00995 79 aa-0.29□□□□□ -2.46
CCDC66-219ENST00000484441 TNFP01375 233 aa-0.29□□□□□ -2.46
CCDC66-219ENST00000484441 DEFB1P60022 68 aa-0.29□□□□□ -2.46
CCDC66-219ENST00000484441 SPINK9Q5DT21 86 aa-0.29□□□□□ -2.46
CCDC66-219ENST00000484441 SFXN4Q6P4A7 337 aa-0.29□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms