RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 SPTBN2O15020 2390 aa8.53□□□□□ -1.04
COL12A1-207ENST00000483888 RS1O15537 224 aa8.53□□□□□ -1.04
COL12A1-207ENST00000483888 PEBP1P30086 187 aaKnown RBP8.53□□□□□ -1.04
COL12A1-207ENST00000483888 PMS2CLQ68D20 193 aa8.53□□□□□ -1.04
COL12A1-207ENST00000483888 TCRBV4S1A1TA0A5B7 111 aa8.52□□□□□ -1.05
COL12A1-207ENST00000483888 TMEM42Q69YG0 159 aa8.52□□□□□ -1.05
COL12A1-207ENST00000483888 LYZL1Q6UWQ5 148 aa8.52□□□□□ -1.05
COL12A1-207ENST00000483888 TET1Q8NFU7 2136 aa8.52□□□□□ -1.05
COL12A1-207ENST00000483888 EXPH5Q8NEV8 1989 aa8.52□□□□□ -1.05
COL12A1-207ENST00000483888 CCL3P10147 92 aa8.52□□□□□ -1.05
COL12A1-207ENST00000483888 SHISA5Q8N114 240 aa8.52□□□□□ -1.05
COL12A1-207ENST00000483888 TRAV41A0A0B4J266 112 aa8.52□□□□□ -1.05
COL12A1-207ENST00000483888 SIVA1O15304 175 aa8.52□□□□□ -1.05
COL12A1-207ENST00000483888 MALP21145 153 aa8.52□□□□□ -1.05
COL12A1-207ENST00000483888 SPATA31B1PQ5VZV4 182 aa8.52□□□□□ -1.05
COL12A1-207ENST00000483888 UBL5Q9BZL1 73 aa8.52□□□□□ -1.05
COL12A1-207ENST00000483888 IGHV3OR16-13A0A075B7E8 117 aa8.52□□□□□ -1.05
COL12A1-207ENST00000483888 IGHV3-49A0A0A0MS15 119 aa8.52□□□□□ -1.05
COL12A1-207ENST00000483888 IGHV3-74A0A0B4J1X5 117 aa8.52□□□□□ -1.05
COL12A1-207ENST00000483888 S4R3C0 116 aa8.52□□□□□ -1.05
COL12A1-207ENST00000483888 SPTY2D1-AS1A0A0U1RR47 76 aa8.52□□□□□ -1.05
COL12A1-207ENST00000483888 PAX4O43316 350 aa8.52□□□□□ -1.05
COL12A1-207ENST00000483888 FAM106CPP0CH98 169 aa8.52□□□□□ -1.05
COL12A1-207ENST00000483888 PRB4P10163 310 aaPredicted RBP8.52□□□□□ -1.05
COL12A1-207ENST00000483888 SPSB3Q6PJ21 355 aa8.52□□□□□ -1.05
COL12A1-207ENST00000483888 APC2O95996 2303 aa8.52□□□□□ -1.05
COL12A1-207ENST00000483888 KLRD1Q13241 179 aa8.52□□□□□ -1.05
COL12A1-207ENST00000483888 TIAF1O95411 115 aa8.51□□□□□ -1.05
COL12A1-207ENST00000483888 ATP5G2Q06055 141 aa8.51□□□□□ -1.05
COL12A1-207ENST00000483888 RNF183Q96D59 192 aa8.51□□□□□ -1.05
COL12A1-207ENST00000483888 PRO1854Q9UHT4 67 aa8.51□□□□□ -1.05
COL12A1-207ENST00000483888 C15orf61A6NNL5 157 aa8.51□□□□□ -1.05
COL12A1-207ENST00000483888 C12orf74Q32Q52 190 aa8.51□□□□□ -1.05
COL12A1-207ENST00000483888 TCTEX1D4Q5JR98 221 aa8.51□□□□□ -1.05
COL12A1-207ENST00000483888 TCRAP04437 139 aa8.51□□□□□ -1.05
COL12A1-207ENST00000483888 MAGEA5P43359 124 aa8.51□□□□□ -1.05
COL12A1-207ENST00000483888 IL11RAQ14626 422 aa8.51□□□□□ -1.05
COL12A1-207ENST00000483888 CLUHP3Q96NS8 147 aa8.51□□□□□ -1.05
COL12A1-207ENST00000483888 IGKV1-8A0A0C4DH67 115 aa8.51□□□□□ -1.05
COL12A1-207ENST00000483888 IGLC1P0CG04 106 aa8.51□□□□□ -1.05
COL12A1-207ENST00000483888 SLC25A39Q9BZJ4 359 aaPredicted RBP8.51□□□□□ -1.05
COL12A1-207ENST00000483888 CD7P09564 240 aa8.51□□□□□ -1.05
COL12A1-207ENST00000483888 CSRP3P50461 194 aa8.51□□□□□ -1.05
COL12A1-207ENST00000483888 CD69Q07108 199 aa8.51□□□□□ -1.05
COL12A1-207ENST00000483888 RSPO4Q2I0M5 234 aaPredicted RBP8.51□□□□□ -1.05
COL12A1-207ENST00000483888 EEF1AKMT3Q96AZ1 226 aa8.51□□□□□ -1.05
COL12A1-207ENST00000483888 CARD19Q96LW7 228 aa8.51□□□□□ -1.05
COL12A1-207ENST00000483888 ALPK3Q96L96 1907 aa8.51□□□□□ -1.05
COL12A1-207ENST00000483888 TRAV12-1A0A0B4J245 112 aa8.51□□□□□ -1.05
COL12A1-207ENST00000483888 HLA-DMBP28068 263 aa8.51□□□□□ -1.05
COL12A1-207ENST00000483888 NMSQ5H8A3 153 aa8.51□□□□□ -1.05
COL12A1-207ENST00000483888 SCARF2Q96GP6 870 aaPredicted RBP8.51□□□□□ -1.05
COL12A1-207ENST00000483888 RNF186Q9NXI6 227 aa8.51□□□□□ -1.05
COL12A1-207ENST00000483888 FREM1Q5H8C1 2179 aa8.51□□□□□ -1.05
COL12A1-207ENST00000483888 KNCNA6PVL3 124 aa8.51□□□□□ -1.05
COL12A1-207ENST00000483888 DRD3P35462 400 aa8.51□□□□□ -1.05
COL12A1-207ENST00000483888 MORN2Q502X0 79 aa8.51□□□□□ -1.05
COL12A1-207ENST00000483888 TREML4Q6UXN2 200 aa8.51□□□□□ -1.05
COL12A1-207ENST00000483888 MRPL55Q7Z7F7 128 aaKnown RBP8.5□□□□□ -1.05
COL12A1-207ENST00000483888 PKIGQ9Y2B9 76 aa8.5□□□□□ -1.05
COL12A1-207ENST00000483888 SUMO4Q6EEV6 95 aa8.5□□□□□ -1.05
COL12A1-207ENST00000483888 A0A1W2PR77 199 aa8.5□□□□□ -1.05
COL12A1-207ENST00000483888 CD24P25063 80 aa8.5□□□□□ -1.05
COL12A1-207ENST00000483888 A0A0G2JMZ2 1700 aa8.5□□□□□ -1.05
COL12A1-207ENST00000483888 LRRC37A2A6NM11 1700 aa8.5□□□□□ -1.05
COL12A1-207ENST00000483888 LRRC37AA6NMS7 1700 aa8.5□□□□□ -1.05
COL12A1-207ENST00000483888 SPEM2Q0P670 501 aa8.5□□□□□ -1.05
COL12A1-207ENST00000483888 ATOX1O00244 68 aa8.5□□□□□ -1.05
COL12A1-207ENST00000483888 CELA2BP08218 269 aaPredicted RBP8.5□□□□□ -1.05
COL12A1-207ENST00000483888 DEFB104AQ8WTQ1 72 aa8.5□□□□□ -1.05
COL12A1-207ENST00000483888 MESP2Q0VG99 397 aa8.5□□□□□ -1.05
COL12A1-207ENST00000483888 DEFB109BQ30KR1 87 aa8.5□□□□□ -1.05
COL12A1-207ENST00000483888 TDRG1Q3Y452 100 aa8.5□□□□□ -1.05
COL12A1-207ENST00000483888 FOXI2Q6ZQN5 318 aa8.5□□□□□ -1.05
COL12A1-207ENST00000483888 SP9P0CG40 484 aa8.5□□□□□ -1.05
COL12A1-207ENST00000483888 PRR32B1ATL7 298 aa8.5□□□□□ -1.05
COL12A1-207ENST00000483888 RCHY1Q96PM5 261 aa8.5□□□□□ -1.05
COL12A1-207ENST00000483888 PAQR4Q8N4S7 273 aaPredicted RBP8.49□□□□□ -1.05
COL12A1-207ENST00000483888 SIT1Q9Y3P8 196 aa8.49□□□□□ -1.05
COL12A1-207ENST00000483888 TANC1Q9C0D5 1861 aa8.49□□□□□ -1.05
COL12A1-207ENST00000483888 SRSF2Q01130 221 aaKnown RBP8.49□□□□□ -1.05
COL12A1-207ENST00000483888 LHFPL1Q86WI0 220 aa8.49□□□□□ -1.05
COL12A1-207ENST00000483888 WDR83OSQ9Y284 106 aa8.49□□□□□ -1.05
COL12A1-207ENST00000483888 TIMM21Q9BVV7 248 aa8.49□□□□□ -1.05
COL12A1-207ENST00000483888 IGKV1D-8A0A087WSZ0 117 aa8.49□□□□□ -1.05
COL12A1-207ENST00000483888 A0A0U1RQV1 116 aa8.49□□□□□ -1.05
COL12A1-207ENST00000483888 C12orf77C9JDV5 145 aa8.49□□□□□ -1.05
COL12A1-207ENST00000483888 MGAMO43451 1857 aa8.49□□□□□ -1.05
COL12A1-207ENST00000483888 SBF1O95248 1867 aa8.49□□□□□ -1.05
COL12A1-207ENST00000483888 GFRALQ6UXV0 394 aa8.49□□□□□ -1.05
COL12A1-207ENST00000483888 EXOC3-AS1Q8N2X6 119 aa8.49□□□□□ -1.05
COL12A1-207ENST00000483888 NTN5Q8WTR8 489 aaPredicted RBP8.49□□□□□ -1.05
COL12A1-207ENST00000483888 JPT2Q9H910 190 aa8.49□□□□□ -1.05
COL12A1-207ENST00000483888 FAM106AQ4KMX7 169 aa8.49□□□□□ -1.05
COL12A1-207ENST00000483888 IFNL4K9M1U5 179 aa8.49□□□□□ -1.05
COL12A1-207ENST00000483888 IL18BPO95998 194 aa8.49□□□□□ -1.05
COL12A1-207ENST00000483888 WFDC2Q14508 124 aa8.49□□□□□ -1.05
COL12A1-207ENST00000483888 A0A1B0GX51 115 aa8.48□□□□□ -1.05
COL12A1-207ENST00000483888 FOXC1Q12948 553 aa8.48□□□□□ -1.05
COL12A1-207ENST00000483888 LGALS9BQ3B8N2 356 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms