RNA–Protein interactions for RNA: ENST00000483690.1

MCF2-207, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

TSL 3

Gene MCF2, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-207ENST00000483690 YPEL2Q96QA6 119 aa2.27□□□□□ -2.05
MCF2-207ENST00000483690 C14orf132Q9NPU4 83 aa2.27□□□□□ -2.05
MCF2-207ENST00000483690 C1QBP02746 253 aa2.26□□□□□ -2.05
MCF2-207ENST00000483690 ACER3Q9NUN7 267 aa2.26□□□□□ -2.05
MCF2-207ENST00000483690 PYCARDQ9ULZ3 195 aa2.26□□□□□ -2.05
MCF2-207ENST00000483690 CCDC88BA6NC98 1476 aa2.26□□□□□ -2.05
MCF2-207ENST00000483690 POLA1P09884 1462 aaPredicted RBP2.26□□□□□ -2.05
MCF2-207ENST00000483690 IQSEC2Q5JU85 1478 aa2.26□□□□□ -2.05
MCF2-207ENST00000483690 TARBP1Q13395 1621 aaKnown RBP2.25□□□□□ -2.05
MCF2-207ENST00000483690 CST8O60676 142 aa2.25□□□□□ -2.05
MCF2-207ENST00000483690 DEFB113Q30KQ7 82 aa2.25□□□□□ -2.05
MCF2-207ENST00000483690 C3orf56Q8N813 242 aa2.25□□□□□ -2.05
MCF2-207ENST00000483690 STOML2Q9UJZ1 356 aa2.25□□□□□ -2.05
MCF2-207ENST00000483690 TOP2AP11388 1531 aaKnown RBP2.25□□□□□ -2.05
MCF2-207ENST00000483690 ARHGEF28Q8N1W1 1705 aaKnown RBP2.25□□□□□ -2.05
MCF2-207ENST00000483690 PTPRGP23470 1445 aa2.25□□□□□ -2.05
MCF2-207ENST00000483690 TRBV6-8A0A0A6YYG3 113 aa2.24□□□□□ -2.05
MCF2-207ENST00000483690 TAX1BP3O14907 124 aa2.24□□□□□ -2.05
MCF2-207ENST00000483690 GADD45GO95257 159 aa2.24□□□□□ -2.05
MCF2-207ENST00000483690 NCALDP61601 193 aa2.24□□□□□ -2.05
MCF2-207ENST00000483690 SARNPP82979 210 aaKnown RBP2.24□□□□□ -2.05
MCF2-207ENST00000483690 C22orf39Q6P5X5 142 aa2.24□□□□□ -2.05
MCF2-207ENST00000483690 CDC26Q8NHZ8 85 aa2.24□□□□□ -2.05
MCF2-207ENST00000483690 GRIN2AQ12879 1464 aa2.24□□□□□ -2.05
MCF2-207ENST00000483690 CD109Q6YHK3 1445 aa2.24□□□□□ -2.05
MCF2-207ENST00000483690 MIA2Q96PC5 1412 aa2.24□□□□□ -2.05
MCF2-207ENST00000483690 DNMBPQ6XZF7 1577 aa2.23□□□□□ -2.05
MCF2-207ENST00000483690 DLG5Q8TDM6 1919 aa2.23□□□□□ -2.05
MCF2-207ENST00000483690 CEP192Q8TEP8 1941 aa2.23□□□□□ -2.05
MCF2-207ENST00000483690 KRTAP10-4P60372 401 aaPredicted RBP2.23□□□□□ -2.05
MCF2-207ENST00000483690 PDZD9Q8IXQ8 264 aa2.23□□□□□ -2.05
MCF2-207ENST00000483690 ODF3Q96PU9 254 aa2.23□□□□□ -2.05
MCF2-207ENST00000483690 TMEM126AQ9H061 195 aa2.23□□□□□ -2.05
MCF2-207ENST00000483690 RASL12Q9NYN1 266 aa2.23□□□□□ -2.05
MCF2-207ENST00000483690 UHRF1BP1Q6BDS2 1440 aa2.23□□□□□ -2.05
MCF2-207ENST00000483690 SCN8AQ9UQD0 1980 aa2.23□□□□□ -2.05
MCF2-207ENST00000483690 EPRSP07814 1512 aaKnown RBP2.22□□□□□ -2.05
MCF2-207ENST00000483690 SCN3AQ9NY46 2000 aa2.22□□□□□ -2.05
MCF2-207ENST00000483690 TECTAO75443 2155 aa2.22□□□□□ -2.05
MCF2-207ENST00000483690 TNRC6BQ9UPQ9 1833 aaKnown RBP2.22□□□□□ -2.05
MCF2-207ENST00000483690 KIF21BO75037 1637 aa2.22□□□□□ -2.05
MCF2-207ENST00000483690 NDUFB3O43676 98 aa2.22□□□□□ -2.05
MCF2-207ENST00000483690 TIMM17BO60830 172 aa2.22□□□□□ -2.05
MCF2-207ENST00000483690 ATG12O94817 140 aa2.22□□□□□ -2.05
MCF2-207ENST00000483690 NDUFC2O95298 119 aa2.22□□□□□ -2.05
MCF2-207ENST00000483690 C1orf137Q5JT78 98 aa2.22□□□□□ -2.05
MCF2-207ENST00000483690 SOSTDC1Q6X4U4 206 aa2.22□□□□□ -2.05
MCF2-207ENST00000483690 MRPL57Q9BQC6 102 aaKnown RBP2.22□□□□□ -2.05
MCF2-207ENST00000483690 LINC00467Q9BRT7 94 aa2.22□□□□□ -2.05
MCF2-207ENST00000483690 IL20Q9NYY1 176 aa2.22□□□□□ -2.05
MCF2-207ENST00000483690 CRCT1Q9UGL9 99 aa2.22□□□□□ -2.05
MCF2-207ENST00000483690 GLI2P10070 1586 aa2.22□□□□□ -2.05
MCF2-207ENST00000483690 MYH10P35580 1976 aa2.21□□□□□ -2.05
MCF2-207ENST00000483690 ADCY10Q96PN6 1610 aa2.21□□□□□ -2.06
MCF2-207ENST00000483690 LOC110117498A0A087WWA1 95 aa2.21□□□□□ -2.06
MCF2-207ENST00000483690 CLECL1Q8IZS7 167 aa2.21□□□□□ -2.06
MCF2-207ENST00000483690 ZNF418Q8TF45 676 aaPredicted RBP2.21□□□□□ -2.06
MCF2-207ENST00000483690 C4orf3Q8WVX3 66 aa2.21□□□□□ -2.06
MCF2-207ENST00000483690 CUX1P39880 1505 aa2.21□□□□□ -2.06
MCF2-207ENST00000483690 ABCC2Q92887 1545 aa2.21□□□□□ -2.06
MCF2-207ENST00000483690 FLG2Q5D862 2391 aaPredicted RBP2.21□□□□□ -2.06
MCF2-207ENST00000483690 MADDQ8WXG6 1647 aa2.2□□□□□ -2.06
MCF2-207ENST00000483690 FHAD1B1AJZ9 1412 aa2.2□□□□□ -2.06
MCF2-207ENST00000483690 TRBV6-7A0A0A0MS04 114 aa2.2□□□□□ -2.06
MCF2-207ENST00000483690 G3V2T6 193 aa2.2□□□□□ -2.06
MCF2-207ENST00000483690 GGCTO75223 188 aaKnown RBP2.2□□□□□ -2.06
MCF2-207ENST00000483690 BANF1O75531 89 aa2.2□□□□□ -2.06
MCF2-207ENST00000483690 S100A5P33763 92 aa2.2□□□□□ -2.06
MCF2-207ENST00000483690 CNBPP62633 177 aaKnown RBP2.2□□□□□ -2.06
MCF2-207ENST00000483690 UBE2BP63146 152 aa2.2□□□□□ -2.06
MCF2-207ENST00000483690 RPL19P84098 196 aaKnown RBP2.2□□□□□ -2.06
MCF2-207ENST00000483690 PRNDQ9UKY0 176 aa2.2□□□□□ -2.06
MCF2-207ENST00000483690 KIAA0586Q9BVV6 1533 aa2.2□□□□□ -2.06
MCF2-207ENST00000483690 CACNA1BQ00975 2339 aa2.19□□□□□ -2.06
MCF2-207ENST00000483690 PPRC1Q5VV67 1664 aaKnown RBP2.19□□□□□ -2.06
MCF2-207ENST00000483690 AIPO00170 330 aa2.19□□□□□ -2.06
MCF2-207ENST00000483690 GNG5P63218 68 aa2.19□□□□□ -2.06
MCF2-207ENST00000483690 Q8IYB0 196 aa2.19□□□□□ -2.06
MCF2-207ENST00000483690 FAM19A2Q8N3H0 131 aa2.19□□□□□ -2.06
MCF2-207ENST00000483690 CANT1Q8WVQ1 401 aa2.19□□□□□ -2.06
MCF2-207ENST00000483690 AP3S1Q92572 193 aa2.19□□□□□ -2.06
MCF2-207ENST00000483690 SLC25A21Q9BQT8 299 aaPredicted RBP2.19□□□□□ -2.06
MCF2-207ENST00000483690 MED29Q9NX70 200 aa2.19□□□□□ -2.06
MCF2-207ENST00000483690 PRDM2Q13029 1718 aa2.19□□□□□ -2.06
MCF2-207ENST00000483690 RIMS1Q86UR5 1692 aaKnown RBP2.18□□□□□ -2.06
MCF2-207ENST00000483690 CFAP43Q8NDM7 1665 aa2.18□□□□□ -2.06
MCF2-207ENST00000483690 UACAQ9BZF9 1416 aa2.18□□□□□ -2.06
MCF2-207ENST00000483690 MAGI3Q5TCQ9 1506 aa2.18□□□□□ -2.06
MCF2-207ENST00000483690 WDR97A6NE52 1622 aa2.18□□□□□ -2.06
MCF2-207ENST00000483690 SHROOM2Q13796 1616 aa2.18□□□□□ -2.06
MCF2-207ENST00000483690 CCDC160A6NGH7 325 aa2.18□□□□□ -2.06
MCF2-207ENST00000483690 A8MWV9 139 aa2.18□□□□□ -2.06
MCF2-207ENST00000483690 M0R378 163 aa2.18□□□□□ -2.06
MCF2-207ENST00000483690 MYL5Q02045 173 aa2.18□□□□□ -2.06
MCF2-207ENST00000483690 TEX261Q6UWH6 196 aa2.18□□□□□ -2.06
MCF2-207ENST00000483690 TMED4Q7Z7H5 227 aa2.18□□□□□ -2.06
MCF2-207ENST00000483690 Q8N814 137 aa2.18□□□□□ -2.06
MCF2-207ENST00000483690 OR2T35Q8NGX2 323 aa2.18□□□□□ -2.06
MCF2-207ENST00000483690 TMEM254Q8TBM7 123 aa2.18□□□□□ -2.06
MCF2-207ENST00000483690 U3KQ87 197 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms