RNA–Protein interactions for RNA: ENST00000482745.5

HLA-DQA1-206, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 2,135 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-206ENST00000482745 CD28P10747 220 aa7.98□□□□□ -1.13
HLA-DQA1-206ENST00000482745 RPS20P60866 119 aaKnown RBP7.98□□□□□ -1.13
HLA-DQA1-206ENST00000482745 NSUN5P1Q3KNT7 163 aa7.98□□□□□ -1.13
HLA-DQA1-206ENST00000482745 FAM53AQ6NSI3 398 aaPredicted RBP7.98□□□□□ -1.13
HLA-DQA1-206ENST00000482745 TMEM14EPQ6UXP3 125 aa7.98□□□□□ -1.13
HLA-DQA1-206ENST00000482745 DRAM1Q8N682 238 aa7.98□□□□□ -1.13
HLA-DQA1-206ENST00000482745 OR5T1Q8NG75 326 aa7.98□□□□□ -1.13
HLA-DQA1-206ENST00000482745 OR1L6Q8NGR2 347 aa7.98□□□□□ -1.13
HLA-DQA1-206ENST00000482745 GATAD1Q8WUU5 269 aa7.98□□□□□ -1.13
HLA-DQA1-206ENST00000482745 TMEM147Q9BVK8 224 aa7.98□□□□□ -1.13
HLA-DQA1-206ENST00000482745 MRPL18Q9H0U6 180 aaKnown RBP7.98□□□□□ -1.13
HLA-DQA1-206ENST00000482745 HSPB7Q9UBY9 170 aa7.98□□□□□ -1.13
HLA-DQA1-206ENST00000482745 A0A1W2PPI3 338 aa7.97□□□□□ -1.13
HLA-DQA1-206ENST00000482745 SPINT2O43291 252 aa7.97□□□□□ -1.13
HLA-DQA1-206ENST00000482745 WIPF1O43516 503 aa7.97□□□□□ -1.13
HLA-DQA1-206ENST00000482745 FAM106CPP0CH98 169 aa7.97□□□□□ -1.13
HLA-DQA1-206ENST00000482745 NPPCP23582 126 aa7.97□□□□□ -1.13
HLA-DQA1-206ENST00000482745 REG1BP48304 166 aa7.97□□□□□ -1.13
HLA-DQA1-206ENST00000482745 SPANXN5Q5MJ07 72 aa7.97□□□□□ -1.13
HLA-DQA1-206ENST00000482745 FFAR4Q5NUL3 377 aa7.97□□□□□ -1.13
HLA-DQA1-206ENST00000482745 ETFRF1Q6IPR1 90 aa7.97□□□□□ -1.13
HLA-DQA1-206ENST00000482745 Q6ZRM9 215 aa7.97□□□□□ -1.13
HLA-DQA1-206ENST00000482745 TCTEX1D1Q8N7M0 179 aa7.97□□□□□ -1.13
HLA-DQA1-206ENST00000482745 Q8N976 141 aa7.97□□□□□ -1.13
HLA-DQA1-206ENST00000482745 SLC24A4Q8NFF2 622 aa7.97□□□□□ -1.13
HLA-DQA1-206ENST00000482745 BET1LQ9NYM9 111 aa7.97□□□□□ -1.13
HLA-DQA1-206ENST00000482745 GNG12Q9UBI6 72 aa7.97□□□□□ -1.13
HLA-DQA1-206ENST00000482745 FBXL7Q9UJT9 491 aa7.97□□□□□ -1.13
HLA-DQA1-206ENST00000482745 OR2W1Q9Y3N9 320 aa7.97□□□□□ -1.13
HLA-DQA1-206ENST00000482745 SAA2-SAA4A0A096LPE2 208 aa7.97□□□□□ -1.13
HLA-DQA1-206ENST00000482745 HMGB3O15347 200 aaKnown RBP7.97□□□□□ -1.13
HLA-DQA1-206ENST00000482745 ZNF253O75346 499 aa7.97□□□□□ -1.13
HLA-DQA1-206ENST00000482745 HBZP02008 142 aa7.97□□□□□ -1.13
HLA-DQA1-206ENST00000482745 REG1AP05451 166 aa7.97□□□□□ -1.13
HLA-DQA1-206ENST00000482745 GPX1P07203 203 aa7.97□□□□□ -1.13
HLA-DQA1-206ENST00000482745 LOXL3P58215 753 aa7.97□□□□□ -1.13
HLA-DQA1-206ENST00000482745 KRTDAPP60985 99 aa7.97□□□□□ -1.13
HLA-DQA1-206ENST00000482745 GNB1P62873 340 aa7.97□□□□□ -1.13
HLA-DQA1-206ENST00000482745 OR4C5Q8NGB2 326 aa7.97□□□□□ -1.13
HLA-DQA1-206ENST00000482745 OR5B3Q8NH48 314 aa7.97□□□□□ -1.13
HLA-DQA1-206ENST00000482745 OR51H1Q8NH63 302 aa7.97□□□□□ -1.13
HLA-DQA1-206ENST00000482745 OR1L1Q8NH94 360 aa7.97□□□□□ -1.13
HLA-DQA1-206ENST00000482745 WNT10AQ9GZT5 417 aa7.97□□□□□ -1.13
HLA-DQA1-206ENST00000482745 RAB9BQ9NP90 201 aa7.97□□□□□ -1.13
HLA-DQA1-206ENST00000482745 SLC35D1Q9NTN3 355 aa7.97□□□□□ -1.13
HLA-DQA1-206ENST00000482745 MOB4Q9Y3A3 225 aa7.97□□□□□ -1.13
HLA-DQA1-206ENST00000482745 TMEM11P17152 192 aa7.96□□□□□ -1.13
HLA-DQA1-206ENST00000482745 CBLN1P23435 193 aa7.96□□□□□ -1.13
HLA-DQA1-206ENST00000482745 RPL19P84098 196 aaKnown RBP7.96□□□□□ -1.13
HLA-DQA1-206ENST00000482745 OR10J3Q5JRS4 329 aa7.96□□□□□ -1.13
HLA-DQA1-206ENST00000482745 TRAT1Q6PIZ9 186 aa7.96□□□□□ -1.13
HLA-DQA1-206ENST00000482745 MOB3BQ86TA1 216 aa7.96□□□□□ -1.13
HLA-DQA1-206ENST00000482745 OR10G8Q8NGN5 311 aa7.96□□□□□ -1.13
HLA-DQA1-206ENST00000482745 CITED2Q99967 270 aaPredicted RBP7.96□□□□□ -1.13
HLA-DQA1-206ENST00000482745 LIN7CQ9NUP9 197 aaKnown RBP7.96□□□□□ -1.13
HLA-DQA1-206ENST00000482745 IGHV3-72A0A0B4J1Y9 119 aa7.96□□□□□ -1.14
HLA-DQA1-206ENST00000482745 IGKV1-6A0A0C4DH72 117 aa7.96□□□□□ -1.14
HLA-DQA1-206ENST00000482745 FAM90A9PA6NNJ1 464 aa7.96□□□□□ -1.14
HLA-DQA1-206ENST00000482745 C17orf112F2Z3M2 114 aa7.96□□□□□ -1.14
HLA-DQA1-206ENST00000482745 MT-ND6P03923 174 aa7.96□□□□□ -1.14
HLA-DQA1-206ENST00000482745 AMY1AP04745 511 aa7.96□□□□□ -1.14
HLA-DQA1-206ENST00000482745 CDC34P49427 236 aaPredicted RBP7.96□□□□□ -1.14
HLA-DQA1-206ENST00000482745 ZNF90Q03938 601 aa7.96□□□□□ -1.14
HLA-DQA1-206ENST00000482745 ZNF816Q0VGE8 651 aaPredicted RBP7.96□□□□□ -1.14
HLA-DQA1-206ENST00000482745 WIPF2Q8TF74 440 aaPredicted RBP7.96□□□□□ -1.14
HLA-DQA1-206ENST00000482745 KCNS1Q96KK3 526 aa7.96□□□□□ -1.14
HLA-DQA1-206ENST00000482745 IL36BQ9NZH7 164 aa7.96□□□□□ -1.14
HLA-DQA1-206ENST00000482745 KCNIP1Q9NZI2 227 aa7.96□□□□□ -1.14
HLA-DQA1-206ENST00000482745 TRAV30A0A087WSZ9 112 aa7.95□□□□□ -1.14
HLA-DQA1-206ENST00000482745 TRBV6-6A0A0A6YYG2 114 aa7.95□□□□□ -1.14
HLA-DQA1-206ENST00000482745 IGHV1-3A0A0C4DH29 117 aa7.95□□□□□ -1.14
HLA-DQA1-206ENST00000482745 RBFOX2O43251 390 aaKnown RBP eCLIP7.95□□□□□ -1.14
HLA-DQA1-206ENST00000482745 NDUFB4O95168 129 aa7.95□□□□□ -1.14
HLA-DQA1-206ENST00000482745 IGKV1-39P01597 117 aa7.95□□□□□ -1.14
HLA-DQA1-206ENST00000482745 IGKV1-5P01602 117 aa7.95□□□□□ -1.14
HLA-DQA1-206ENST00000482745 IGKV1D-39P04432 117 aa7.95□□□□□ -1.14
HLA-DQA1-206ENST00000482745 TSPOP30536 169 aa7.95□□□□□ -1.14
HLA-DQA1-206ENST00000482745 IZUMO4Q1ZYL8 232 aa7.95□□□□□ -1.14
HLA-DQA1-206ENST00000482745 LINC00311Q8N616 119 aa7.95□□□□□ -1.14
HLA-DQA1-206ENST00000482745 NPCDR1Q9BY65 106 aa7.95□□□□□ -1.14
HLA-DQA1-206ENST00000482745 GNB1LQ9BYB4 327 aa7.95□□□□□ -1.14
HLA-DQA1-206ENST00000482745 NRN1Q9NPD7 142 aa7.95□□□□□ -1.14
HLA-DQA1-206ENST00000482745 A0A1W2PRX2 142 aa7.94□□□□□ -1.14
HLA-DQA1-206ENST00000482745 FCN1O00602 326 aa7.94□□□□□ -1.14
HLA-DQA1-206ENST00000482745 RNF151Q2KHN1 245 aa7.94□□□□□ -1.14
HLA-DQA1-206ENST00000482745 VWC2Q2TAL6 325 aa7.94□□□□□ -1.14
HLA-DQA1-206ENST00000482745 TMEM30BQ3MIR4 351 aa7.94□□□□□ -1.14
HLA-DQA1-206ENST00000482745 COX19Q49B96 90 aa7.94□□□□□ -1.14
HLA-DQA1-206ENST00000482745 SLC25A48Q6ZT89 311 aaKnown RBP7.94□□□□□ -1.14
HLA-DQA1-206ENST00000482745 NDUFA11Q86Y39 141 aa7.94□□□□□ -1.14
HLA-DQA1-206ENST00000482745 C8orf31Q8N9H6 132 aa7.94□□□□□ -1.14
HLA-DQA1-206ENST00000482745 ZNF439Q8NDP4 499 aa7.94□□□□□ -1.14
HLA-DQA1-206ENST00000482745 MBNL3Q9NUK0 354 aaKnown RBP7.94□□□□□ -1.14
HLA-DQA1-206ENST00000482745 AMTP48728 403 aa7.94□□□□□ -1.14
HLA-DQA1-206ENST00000482745 PMCHL1Q16048 86 aa7.94□□□□□ -1.14
HLA-DQA1-206ENST00000482745 KHDC1LQ5JSQ8 128 aa7.94□□□□□ -1.14
HLA-DQA1-206ENST00000482745 WDR73Q6P4I2 378 aa7.94□□□□□ -1.14
HLA-DQA1-206ENST00000482745 C19orf35Q6ZS72 473 aa7.94□□□□□ -1.14
HLA-DQA1-206ENST00000482745 C5orf56Q8N8D9 126 aa7.94□□□□□ -1.14
HLA-DQA1-206ENST00000482745 ZNF114Q8NC26 417 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms