RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 CFDP00746 253 aaPredicted RBP12.14□□□□□ -0.47
VAMP4-204ENST00000482519 TMEM14EPQ6UXP3 125 aa12.14□□□□□ -0.47
VAMP4-204ENST00000482519 GSG1LQ6UXU4 331 aa12.14□□□□□ -0.47
VAMP4-204ENST00000482519 TMEM144Q7Z5S9 345 aa12.14□□□□□ -0.47
VAMP4-204ENST00000482519 OR10P1Q8NGE3 313 aa12.14□□□□□ -0.47
VAMP4-204ENST00000482519 OR1B1Q8NGR6 318 aa12.14□□□□□ -0.47
VAMP4-204ENST00000482519 OR11H2Q8NH07 326 aa12.14□□□□□ -0.47
VAMP4-204ENST00000482519 LINC00052Q96N35 136 aa12.14□□□□□ -0.47
VAMP4-204ENST00000482519 SLC25A22Q9H936 323 aa12.14□□□□□ -0.47
VAMP4-204ENST00000482519 DOK5Q9P104 306 aa12.14□□□□□ -0.47
VAMP4-204ENST00000482519 FBXL17Q9UF56 701 aa12.14□□□□□ -0.47
VAMP4-204ENST00000482519 STARD9Q9P2P6 4700 aa12.13□□□□□ -0.47
VAMP4-204ENST00000482519 C7orf66A4D0T2 115 aa12.13□□□□□ -0.47
VAMP4-204ENST00000482519 CXorf65A6NEN9 183 aa12.13□□□□□ -0.47
VAMP4-204ENST00000482519 PMS2P5A8MQ11 134 aa12.13□□□□□ -0.47
VAMP4-204ENST00000482519 TSC22D2O75157 780 aa12.13□□□□□ -0.47
VAMP4-204ENST00000482519 IL5P05113 134 aa12.13□□□□□ -0.47
VAMP4-204ENST00000482519 EWSR1Q01844 656 aaKnown RBP eCLIP12.13□□□□□ -0.47
VAMP4-204ENST00000482519 PMS2P11Q13670 270 aa12.13□□□□□ -0.47
VAMP4-204ENST00000482519 C1orf194Q5T5A4 169 aa12.13□□□□□ -0.47
VAMP4-204ENST00000482519 CYP2G1PQ6ZSU1 146 aa12.13□□□□□ -0.47
VAMP4-204ENST00000482519 TRPT1Q86TN4 253 aaKnown RBP12.13□□□□□ -0.47
VAMP4-204ENST00000482519 GATAD1Q8WUU5 269 aa12.13□□□□□ -0.47
VAMP4-204ENST00000482519 TMEM147Q9BVK8 224 aa12.13□□□□□ -0.47
VAMP4-204ENST00000482519 MGAT4CQ9UBM8 478 aa12.13□□□□□ -0.47
VAMP4-204ENST00000482519 BCAP31P51572 246 aa12.12□□□□□ -0.47
VAMP4-204ENST00000482519 TAS2R30P59541 319 aa12.12□□□□□ -0.47
VAMP4-204ENST00000482519 S100A10P60903 97 aa12.12□□□□□ -0.47
VAMP4-204ENST00000482519 DLK1P80370 383 aa12.12□□□□□ -0.47
VAMP4-204ENST00000482519 K7EPK0 472 aa12.11□□□□□ -0.47
VAMP4-204ENST00000482519 ID1P41134 155 aa12.11□□□□□ -0.47
VAMP4-204ENST00000482519 MORN3Q6PF18 240 aaPredicted RBP12.11□□□□□ -0.47
VAMP4-204ENST00000482519 TMEM217Q8N7C4 229 aa12.11□□□□□ -0.47
VAMP4-204ENST00000482519 C2orf50Q96LR7 162 aa12.11□□□□□ -0.47
VAMP4-204ENST00000482519 NPVFQ9HCQ7 196 aa12.11□□□□□ -0.47
VAMP4-204ENST00000482519 CLEC5AQ9NY25 188 aa12.11□□□□□ -0.47
VAMP4-204ENST00000482519 ZNF98A6NK75 572 aa12.1□□□□□ -0.47
VAMP4-204ENST00000482519 OR5G3P0C626 314 aa12.1□□□□□ -0.47
VAMP4-204ENST00000482519 SPP1P10451 314 aa12.1□□□□□ -0.47
VAMP4-204ENST00000482519 GALR1P47211 349 aa12.1□□□□□ -0.47
VAMP4-204ENST00000482519 CAV2P51636 162 aa12.1□□□□□ -0.47
VAMP4-204ENST00000482519 DEFB1P60022 68 aa12.1□□□□□ -0.47
VAMP4-204ENST00000482519 IFITM3Q01628 133 aa12.1□□□□□ -0.47
VAMP4-204ENST00000482519 ARL16Q0P5N6 197 aa12.1□□□□□ -0.47
VAMP4-204ENST00000482519 RSG1Q9BU20 258 aa12.1□□□□□ -0.47
VAMP4-204ENST00000482519 SLC25A32Q9H2D1 315 aa12.1□□□□□ -0.47
VAMP4-204ENST00000482519 SEPSECSQ9HD40 501 aaKnown RBP12.1□□□□□ -0.47
VAMP4-204ENST00000482519 DYNC2H1Q8NCM8 4307 aaKnown RBP12.1□□□□□ -0.47
VAMP4-204ENST00000482519 DEFB4AO15263 64 aa12.09□□□□□ -0.47
VAMP4-204ENST00000482519 HYPMO75409 117 aa12.09□□□□□ -0.47
VAMP4-204ENST00000482519 IGKV3-20P01619 116 aa12.09□□□□□ -0.47
VAMP4-204ENST00000482519 GIG44P09565 113 aaPredicted RBP12.09□□□□□ -0.47
VAMP4-204ENST00000482519 LINC00869P0C866 280 aa12.09□□□□□ -0.47
VAMP4-204ENST00000482519 PVALBP20472 110 aaPredicted RBP12.09□□□□□ -0.47
VAMP4-204ENST00000482519 C4BPBP20851 252 aa12.09□□□□□ -0.47
VAMP4-204ENST00000482519 S100A7P31151 101 aa12.09□□□□□ -0.47
VAMP4-204ENST00000482519 RAP2BP61225 183 aa12.09□□□□□ -0.47
VAMP4-204ENST00000482519 SLC38A11Q08AI6 406 aa12.09□□□□□ -0.47
VAMP4-204ENST00000482519 TEPPQ6URK8 271 aa12.09□□□□□ -0.47
VAMP4-204ENST00000482519 NRARPQ7Z6K4 114 aa12.09□□□□□ -0.47
VAMP4-204ENST00000482519 SCRT1Q9BWW7 348 aa12.09□□□□□ -0.47
VAMP4-204ENST00000482519 GPN1Q9HCN4 374 aaPredicted RBP12.09□□□□□ -0.47
VAMP4-204ENST00000482519 BATF3Q9NR55 127 aa12.09□□□□□ -0.47
VAMP4-204ENST00000482519 SLC45A2Q9UMX9 530 aa12.09□□□□□ -0.47
VAMP4-204ENST00000482519 HIGD1AQ9Y241 93 aa12.09□□□□□ -0.47
VAMP4-204ENST00000482519 LCE6AA0A183 80 aa12.08□□□□□ -0.48
VAMP4-204ENST00000482519 FAM24AA6NFZ4 105 aa12.08□□□□□ -0.48
VAMP4-204ENST00000482519 CST7O76096 145 aa12.08□□□□□ -0.48
VAMP4-204ENST00000482519 PSMB3P49720 205 aa12.08□□□□□ -0.48
VAMP4-204ENST00000482519 SELENOTP62341 195 aa12.08□□□□□ -0.48
VAMP4-204ENST00000482519 TMEM41BQ5BJD5 291 aa12.08□□□□□ -0.48
VAMP4-204ENST00000482519 C16orf92Q96LL3 132 aa12.08□□□□□ -0.48
VAMP4-204ENST00000482519 ARL6Q9H0F7 186 aa12.08□□□□□ -0.48
VAMP4-204ENST00000482519 FNDC10F2Z333 226 aa12.07□□□□□ -0.48
VAMP4-204ENST00000482519 H3BMM0 161 aa12.07□□□□□ -0.48
VAMP4-204ENST00000482519 GOSR2O14653 212 aa12.07□□□□□ -0.48
VAMP4-204ENST00000482519 DEDDO75618 318 aa12.07□□□□□ -0.48
VAMP4-204ENST00000482519 NUTF2P61970 127 aaKnown RBP12.07□□□□□ -0.48
VAMP4-204ENST00000482519 FGL1Q08830 312 aa12.07□□□□□ -0.48
VAMP4-204ENST00000482519 GDF5OSQ5U4N7 250 aa12.07□□□□□ -0.48
VAMP4-204ENST00000482519 UHRF2Q96PU4 802 aa12.07□□□□□ -0.48
VAMP4-204ENST00000482519 GGACTQ9BVM4 153 aa12.07□□□□□ -0.48
VAMP4-204ENST00000482519 SLC25A39Q9BZJ4 359 aaPredicted RBP12.07□□□□□ -0.48
VAMP4-204ENST00000482519 XCL2Q9UBD3 114 aa12.07□□□□□ -0.48
VAMP4-204ENST00000482519 INMT-MINDY4F8WBC2 141 aa12.06□□□□□ -0.48
VAMP4-204ENST00000482519 ISLRO14498 428 aa12.06□□□□□ -0.48
VAMP4-204ENST00000482519 SOCS3O14543 225 aa12.06□□□□□ -0.48
VAMP4-204ENST00000482519 SIX6O95475 246 aa12.06□□□□□ -0.48
VAMP4-204ENST00000482519 MEOX2P50222 304 aa12.06□□□□□ -0.48
VAMP4-204ENST00000482519 DEFA1P59665 94 aa12.06□□□□□ -0.48
VAMP4-204ENST00000482519 DEFA3P59666 94 aa12.06□□□□□ -0.48
VAMP4-204ENST00000482519 RAB32Q13637 225 aa12.06□□□□□ -0.48
VAMP4-204ENST00000482519 OR4B1Q8NGF8 309 aa12.06□□□□□ -0.48
VAMP4-204ENST00000482519 GPR82Q96P67 336 aa12.06□□□□□ -0.48
VAMP4-204ENST00000482519 SHANK2-AS3Q9BTD1 123 aa12.06□□□□□ -0.48
VAMP4-204ENST00000482519 H3BRN7 92 aa12.05□□□□□ -0.48
VAMP4-204ENST00000482519 AGPAT2O15120 278 aa12.05□□□□□ -0.48
VAMP4-204ENST00000482519 JTBO76095 146 aa12.05□□□□□ -0.48
VAMP4-204ENST00000482519 HLA-DRB4P13762 266 aa12.05□□□□□ -0.48
VAMP4-204ENST00000482519 ATF4P18848 351 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms