RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 DMRTA1Q5VZB9 504 aa8.7□□□□□ -1.02
HMGN1-213ENST00000482192 OR8I2Q8N0Y5 310 aa8.7□□□□□ -1.02
HMGN1-213ENST00000482192 C12orf45Q8N5I9 185 aaPredicted RBP8.7□□□□□ -1.02
HMGN1-213ENST00000482192 OR10P1Q8NGE3 313 aa8.7□□□□□ -1.02
HMGN1-213ENST00000482192 OR11H2Q8NH07 326 aa8.7□□□□□ -1.02
HMGN1-213ENST00000482192 SEC22CQ9BRL7 303 aa8.7□□□□□ -1.02
HMGN1-213ENST00000482192 TBC1D24Q9ULP9 559 aa8.7□□□□□ -1.02
HMGN1-213ENST00000482192 KMT2CQ8NEZ4 4911 aaKnown RBP8.7□□□□□ -1.02
HMGN1-213ENST00000482192 CXorf65A6NEN9 183 aa8.69□□□□□ -1.02
HMGN1-213ENST00000482192 FAM25EA8MYX2 175 aa8.69□□□□□ -1.02
HMGN1-213ENST00000482192 FNDC10F2Z333 226 aa8.69□□□□□ -1.02
HMGN1-213ENST00000482192 UPK1BO75841 260 aa8.69□□□□□ -1.02
HMGN1-213ENST00000482192 IL5P05113 134 aa8.69□□□□□ -1.02
HMGN1-213ENST00000482192 ORM2P19652 201 aa8.69□□□□□ -1.02
HMGN1-213ENST00000482192 ID1P41134 155 aa8.69□□□□□ -1.02
HMGN1-213ENST00000482192 PSMB3P49720 205 aa8.69□□□□□ -1.02
HMGN1-213ENST00000482192 SAMD13Q5VXD3 122 aa8.69□□□□□ -1.02
HMGN1-213ENST00000482192 TMEM147Q9BVK8 224 aa8.69□□□□□ -1.02
HMGN1-213ENST00000482192 MGAT4CQ9UBM8 478 aa8.69□□□□□ -1.02
HMGN1-213ENST00000482192 NBEAL2Q6ZNJ1 2754 aa8.69□□□□□ -1.02
HMGN1-213ENST00000482192 C7orf66A4D0T2 115 aa8.68□□□□□ -1.02
HMGN1-213ENST00000482192 C5orf51A6NDU8 294 aa8.68□□□□□ -1.02
HMGN1-213ENST00000482192 L7N2F9 121 aa8.68□□□□□ -1.02
HMGN1-213ENST00000482192 CCNKO75909 580 aa8.68□□□□□ -1.02
HMGN1-213ENST00000482192 C4BPBP20851 252 aa8.68□□□□□ -1.02
HMGN1-213ENST00000482192 GATA2P23769 480 aaPredicted RBP8.68□□□□□ -1.02
HMGN1-213ENST00000482192 GALR1P47211 349 aa8.68□□□□□ -1.02
HMGN1-213ENST00000482192 NUTF2P61970 127 aaKnown RBP8.68□□□□□ -1.02
HMGN1-213ENST00000482192 RRAS2P62070 204 aaPredicted RBP8.68□□□□□ -1.02
HMGN1-213ENST00000482192 SELENOTP62341 195 aa8.68□□□□□ -1.02
HMGN1-213ENST00000482192 VAMP2P63027 116 aa8.68□□□□□ -1.02
HMGN1-213ENST00000482192 EWSR1Q01844 656 aaKnown RBP eCLIP8.68□□□□□ -1.02
HMGN1-213ENST00000482192 TMEM182Q6ZP80 229 aaPredicted RBP8.68□□□□□ -1.02
HMGN1-213ENST00000482192 CYP2G1PQ6ZSU1 146 aa8.68□□□□□ -1.02
HMGN1-213ENST00000482192 OR1B1Q8NGR6 318 aa8.68□□□□□ -1.02
HMGN1-213ENST00000482192 ENKURQ8TC29 256 aa8.68□□□□□ -1.02
HMGN1-213ENST00000482192 C2orf50Q96LR7 162 aa8.68□□□□□ -1.02
HMGN1-213ENST00000482192 GPR82Q96P67 336 aa8.68□□□□□ -1.02
HMGN1-213ENST00000482192 C11orf68Q9H3H3 251 aaKnown RBP8.68□□□□□ -1.02
HMGN1-213ENST00000482192 SLC25A22Q9H936 323 aa8.68□□□□□ -1.02
HMGN1-213ENST00000482192 NPVFQ9HCQ7 196 aa8.68□□□□□ -1.02
HMGN1-213ENST00000482192 PLA2G2EQ9NZK7 142 aa8.68□□□□□ -1.02
HMGN1-213ENST00000482192 NUPR2A6NF83 97 aa8.67□□□□□ -1.02
HMGN1-213ENST00000482192 ZNF98A6NK75 572 aa8.67□□□□□ -1.02
HMGN1-213ENST00000482192 K7EPK0 472 aa8.67□□□□□ -1.02
HMGN1-213ENST00000482192 ISLRO14498 428 aa8.67□□□□□ -1.02
HMGN1-213ENST00000482192 SOCS3O14543 225 aa8.67□□□□□ -1.02
HMGN1-213ENST00000482192 JTBO76095 146 aa8.67□□□□□ -1.02
HMGN1-213ENST00000482192 GIG44P09565 113 aaPredicted RBP8.67□□□□□ -1.02
HMGN1-213ENST00000482192 MEOX2P50222 304 aa8.67□□□□□ -1.02
HMGN1-213ENST00000482192 PMS2P11Q13670 270 aa8.67□□□□□ -1.02
HMGN1-213ENST00000482192 TEPPQ6URK8 271 aa8.67□□□□□ -1.02
HMGN1-213ENST00000482192 GSG1LQ6UXU4 331 aa8.67□□□□□ -1.02
HMGN1-213ENST00000482192 LINC00052Q96N35 136 aa8.67□□□□□ -1.02
HMGN1-213ENST00000482192 GGACTQ9BVM4 153 aa8.67□□□□□ -1.02
HMGN1-213ENST00000482192 C1QTNF4Q9BXJ3 329 aa8.67□□□□□ -1.02
HMGN1-213ENST00000482192 SLC25A32Q9H2D1 315 aa8.67□□□□□ -1.02
HMGN1-213ENST00000482192 LSM5Q9Y4Y9 91 aaKnown RBP8.67□□□□□ -1.02
HMGN1-213ENST00000482192 H3BMM0 161 aa8.66□□□□□ -1.02
HMGN1-213ENST00000482192 HYPMO75409 117 aa8.66□□□□□ -1.02
HMGN1-213ENST00000482192 LINC00869P0C866 280 aa8.66□□□□□ -1.02
HMGN1-213ENST00000482192 HLA-DRB4P13762 266 aa8.66□□□□□ -1.02
HMGN1-213ENST00000482192 PVALBP20472 110 aaPredicted RBP8.66□□□□□ -1.02
HMGN1-213ENST00000482192 BCAP31P51572 246 aa8.66□□□□□ -1.02
HMGN1-213ENST00000482192 CAV2P51636 162 aa8.66□□□□□ -1.02
HMGN1-213ENST00000482192 RAP2BP61225 183 aa8.66□□□□□ -1.02
HMGN1-213ENST00000482192 FOXI2Q6ZQN5 318 aa8.66□□□□□ -1.02
HMGN1-213ENST00000482192 S100A7AQ86SG5 101 aa8.66□□□□□ -1.02
HMGN1-213ENST00000482192 ZNF546Q86UE3 836 aa8.66□□□□□ -1.02
HMGN1-213ENST00000482192 SHANK2-AS3Q9BTD1 123 aa8.66□□□□□ -1.02
HMGN1-213ENST00000482192 SCRT1Q9BWW7 348 aa8.66□□□□□ -1.02
HMGN1-213ENST00000482192 GPN1Q9HCN4 374 aaPredicted RBP8.66□□□□□ -1.02
HMGN1-213ENST00000482192 BATF3Q9NR55 127 aa8.66□□□□□ -1.02
HMGN1-213ENST00000482192 DOK5Q9P104 306 aa8.66□□□□□ -1.02
HMGN1-213ENST00000482192 HIGD1AQ9Y241 93 aa8.66□□□□□ -1.02
HMGN1-213ENST00000482192 HLA-DRB4X5D2U9 266 aa8.66□□□□□ -1.02
HMGN1-213ENST00000482192 H3BRN7 92 aa8.65□□□□□ -1.02
HMGN1-213ENST00000482192 DEDDO75618 318 aa8.65□□□□□ -1.02
HMGN1-213ENST00000482192 OR5G3P0C626 314 aa8.65□□□□□ -1.02
HMGN1-213ENST00000482192 MIFP14174 115 aa8.65□□□□□ -1.02
HMGN1-213ENST00000482192 PLP1P60201 277 aa8.65□□□□□ -1.02
HMGN1-213ENST00000482192 S100A10P60903 97 aa8.65□□□□□ -1.02
HMGN1-213ENST00000482192 SLC38A11Q08AI6 406 aa8.65□□□□□ -1.02
HMGN1-213ENST00000482192 ARL16Q0P5N6 197 aa8.65□□□□□ -1.02
HMGN1-213ENST00000482192 PXDC1Q5TGL8 231 aa8.65□□□□□ -1.02
HMGN1-213ENST00000482192 SPATA31B1PQ5VZV4 182 aa8.65□□□□□ -1.02
HMGN1-213ENST00000482192 CEMP1Q6PRD7 247 aaPredicted RBP8.65□□□□□ -1.02
HMGN1-213ENST00000482192 CSNK1G2-AS1Q8NCQ2 148 aa8.65□□□□□ -1.02
HMGN1-213ENST00000482192 C11orf45Q8TAV5 145 aa8.65□□□□□ -1.02
HMGN1-213ENST00000482192 C16orf92Q96LL3 132 aa8.65□□□□□ -1.02
HMGN1-213ENST00000482192 RSG1Q9BU20 258 aa8.65□□□□□ -1.02
HMGN1-213ENST00000482192 SLC25A39Q9BZJ4 359 aaPredicted RBP8.65□□□□□ -1.02
HMGN1-213ENST00000482192 MFFQ9GZY8 342 aa8.65□□□□□ -1.02
HMGN1-213ENST00000482192 SAV1Q9H4B6 383 aaPredicted RBP8.65□□□□□ -1.02
HMGN1-213ENST00000482192 CLEC5AQ9NY25 188 aa8.65□□□□□ -1.02
HMGN1-213ENST00000482192 ZNF705EA8MWA4 302 aaPredicted RBP8.64□□□□□ -1.03
HMGN1-213ENST00000482192 GOSR2O14653 212 aa8.64□□□□□ -1.03
HMGN1-213ENST00000482192 RPL7P18124 248 aaKnown RBP8.64□□□□□ -1.03
HMGN1-213ENST00000482192 IFITM3Q01628 133 aa8.64□□□□□ -1.03
HMGN1-213ENST00000482192 GDF5OSQ5U4N7 250 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms