RNA–Protein interactions for RNA: ENST00000481991.1

USP54-213, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 403 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-213ENST00000481991 TAS2R60P59551 318 aa5.24□□□□□ -1.57
USP54-213ENST00000481991 MXD1Q05195 221 aa5.24□□□□□ -1.57
USP54-213ENST00000481991 TRIM16LQ309B1 348 aa5.24□□□□□ -1.57
USP54-213ENST00000481991 ETFRF1Q6IPR1 90 aa5.24□□□□□ -1.57
USP54-213ENST00000481991 TMED4Q7Z7H5 227 aa5.24□□□□□ -1.57
USP54-213ENST00000481991 RNF125Q96EQ8 232 aa5.24□□□□□ -1.57
USP54-213ENST00000481991 RRNAD1Q96FB5 475 aaKnown RBP5.24□□□□□ -1.57
USP54-213ENST00000481991 TMEM70Q9BUB7 260 aa5.24□□□□□ -1.57
USP54-213ENST00000481991 AUNIPQ9H7T9 357 aa5.24□□□□□ -1.57
USP54-213ENST00000481991 SLC25A22Q9H936 323 aa5.24□□□□□ -1.57
USP54-213ENST00000481991 MSRB1Q9NZV6 116 aa5.24□□□□□ -1.57
USP54-213ENST00000481991 TRDV1A0A1B0GX56 115 aa5.23□□□□□ -1.57
USP54-213ENST00000481991 PLAC8L1A1L4L8 177 aa5.23□□□□□ -1.57
USP54-213ENST00000481991 ZNF98A6NK75 572 aa5.23□□□□□ -1.57
USP54-213ENST00000481991 ZFP92A6NM28 416 aa5.23□□□□□ -1.57
USP54-213ENST00000481991 CEBPZOSA8MTT3 80 aa5.23□□□□□ -1.57
USP54-213ENST00000481991 CRXO43186 299 aaPredicted RBP5.23□□□□□ -1.57
USP54-213ENST00000481991 ATG12O94817 140 aa5.23□□□□□ -1.57
USP54-213ENST00000481991 NXPH3O95157 252 aa5.23□□□□□ -1.57
USP54-213ENST00000481991 ELK1P19419 428 aa5.23□□□□□ -1.57
USP54-213ENST00000481991 PSMB9P28065 219 aa5.23□□□□□ -1.57
USP54-213ENST00000481991 HIST1H1AQ02539 215 aaPredicted RBP5.23□□□□□ -1.57
USP54-213ENST00000481991 OR2F1Q13607 317 aa5.23□□□□□ -1.57
USP54-213ENST00000481991 KLF9Q13886 244 aaPredicted RBP5.23□□□□□ -1.57
USP54-213ENST00000481991 TBCEQ15813 527 aaPredicted RBP5.23□□□□□ -1.57
USP54-213ENST00000481991 RNF182Q8N6D2 247 aa5.23□□□□□ -1.57
USP54-213ENST00000481991 PACRGLQ8N7B6 248 aa5.23□□□□□ -1.57
USP54-213ENST00000481991 ZNF738Q8NE65 137 aa5.23□□□□□ -1.57
USP54-213ENST00000481991 OR5H6Q8NGV6 325 aa5.23□□□□□ -1.57
USP54-213ENST00000481991 FXYD6Q9H0Q3 95 aa5.23□□□□□ -1.57
USP54-213ENST00000481991 TRGV2A0A075B6R0 118 aa5.22□□□□□ -1.57
USP54-213ENST00000481991 SNRPGP15A8MWD9 76 aa5.22□□□□□ -1.57
USP54-213ENST00000481991 SNURFLB1AK76 121 aa5.22□□□□□ -1.57
USP54-213ENST00000481991 SOCS3O14543 225 aa5.22□□□□□ -1.57
USP54-213ENST00000481991 OXTP01178 125 aa5.22□□□□□ -1.57
USP54-213ENST00000481991 IGKV1-5P01602 117 aa5.22□□□□□ -1.57
USP54-213ENST00000481991 HRH1P35367 487 aa5.22□□□□□ -1.57
USP54-213ENST00000481991 GALR1P47211 349 aa5.22□□□□□ -1.57
USP54-213ENST00000481991 TAS2R46P59540 309 aa5.22□□□□□ -1.57
USP54-213ENST00000481991 SUPT4H1P63272 117 aaKnown RBP5.22□□□□□ -1.57
USP54-213ENST00000481991 SP6Q3SY56 376 aa5.22□□□□□ -1.57
USP54-213ENST00000481991 AMTNQ6UX39 209 aa5.22□□□□□ -1.57
USP54-213ENST00000481991 TMEM256Q8N2U0 113 aa5.22□□□□□ -1.57
USP54-213ENST00000481991 LRRC20Q8TCA0 184 aa5.22□□□□□ -1.57
USP54-213ENST00000481991 C8orf4Q9NR00 106 aa5.22□□□□□ -1.57
USP54-213ENST00000481991 LY96Q9Y6Y9 160 aa5.22□□□□□ -1.57
USP54-213ENST00000481991 FAT1Q14517 4588 aa5.21□□□□□ -1.58
USP54-213ENST00000481991 INS-IGF2F8WCM5 200 aa5.21□□□□□ -1.58
USP54-213ENST00000481991 BOLA2-SMG1P6H3BVE0 249 aa5.21□□□□□ -1.58
USP54-213ENST00000481991 GABARAPH6UMI1 98 aa5.21□□□□□ -1.58
USP54-213ENST00000481991 J3KRW8 73 aa5.21□□□□□ -1.58
USP54-213ENST00000481991 PAX4O43316 350 aa5.21□□□□□ -1.58
USP54-213ENST00000481991 GABARAPO95166 117 aa5.21□□□□□ -1.58
USP54-213ENST00000481991 PI3P19957 117 aa5.21□□□□□ -1.58
USP54-213ENST00000481991 EVI2AP22794 236 aa5.21□□□□□ -1.58
USP54-213ENST00000481991 MEOX2P50222 304 aa5.21□□□□□ -1.58
USP54-213ENST00000481991 SPCS3P61009 180 aa5.21□□□□□ -1.58
USP54-213ENST00000481991 ZNF90Q03938 601 aa5.21□□□□□ -1.58
USP54-213ENST00000481991 C1orf194Q5T5A4 169 aa5.21□□□□□ -1.58
USP54-213ENST00000481991 SAMD13Q5VXD3 122 aa5.21□□□□□ -1.58
USP54-213ENST00000481991 ZNF493Q6ZR52 646 aa5.21□□□□□ -1.58
USP54-213ENST00000481991 RNASEH2CQ8TDP1 164 aaKnown RBP5.21□□□□□ -1.58
USP54-213ENST00000481991 S100A16Q96FQ6 103 aaKnown RBP5.21□□□□□ -1.58
USP54-213ENST00000481991 TMPRSS5Q9H3S3 457 aa5.21□□□□□ -1.58
USP54-213ENST00000481991 FAM212BQ9NTI7 297 aaPredicted RBP5.21□□□□□ -1.58
USP54-213ENST00000481991 SSR3Q9UNL2 185 aa5.21□□□□□ -1.58
USP54-213ENST00000481991 ICOSQ9Y6W8 199 aa5.21□□□□□ -1.58
USP54-213ENST00000481991 H3BNG1 76 aa5.2□□□□□ -1.58
USP54-213ENST00000481991 FABP1P07148 127 aa5.2□□□□□ -1.58
USP54-213ENST00000481991 CLEC2LP0C7M8 214 aa5.2□□□□□ -1.58
USP54-213ENST00000481991 SDC2P34741 201 aa5.2□□□□□ -1.58
USP54-213ENST00000481991 C2orf83Q53S99 150 aa5.2□□□□□ -1.58
USP54-213ENST00000481991 OR8G2PQ6IF36 304 aa5.2□□□□□ -1.58
USP54-213ENST00000481991 PRSS48Q7RTY5 328 aa5.2□□□□□ -1.58
USP54-213ENST00000481991 NOXA1Q86UR1 476 aa5.2□□□□□ -1.58
USP54-213ENST00000481991 ARRDC1Q8N5I2 433 aa5.2□□□□□ -1.58
USP54-213ENST00000481991 SLC24A4Q8NFF2 622 aa5.2□□□□□ -1.58
USP54-213ENST00000481991 TMEM263Q8WUH6 116 aaKnown RBP5.2□□□□□ -1.58
USP54-213ENST00000481991 SLC25A38Q96DW6 304 aa5.2□□□□□ -1.58
USP54-213ENST00000481991 VSIG2Q96IQ7 327 aa5.2□□□□□ -1.58
USP54-213ENST00000481991 TP53RKQ96S44 253 aa5.2□□□□□ -1.58
USP54-213ENST00000481991 VCXQ9H320 206 aa5.2□□□□□ -1.58
USP54-213ENST00000481991 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.2□□□□□ -1.58
USP54-213ENST00000481991 TXNL4BQ9NX01 149 aaKnown RBP5.2□□□□□ -1.58
USP54-213ENST00000481991 PAIP2BQ9ULR5 123 aaKnown RBP5.2□□□□□ -1.58
USP54-213ENST00000481991 C3orf85A0A1B0GTC6 90 aa5.19□□□□□ -1.58
USP54-213ENST00000481991 IGHV3-53P01767 116 aa5.19□□□□□ -1.58
USP54-213ENST00000481991 OR5AC1P0C628 307 aa5.19□□□□□ -1.58
USP54-213ENST00000481991 ORM2P19652 201 aa5.19□□□□□ -1.58
USP54-213ENST00000481991 PRSS3P35030 304 aa5.19□□□□□ -1.58
USP54-213ENST00000481991 ASIPP42127 132 aa5.19□□□□□ -1.58
USP54-213ENST00000481991 PIGPP57054 158 aa5.19□□□□□ -1.58
USP54-213ENST00000481991 LYPD5Q6UWN5 251 aa5.19□□□□□ -1.58
USP54-213ENST00000481991 CCDC190Q86UF4 302 aa5.19□□□□□ -1.58
USP54-213ENST00000481991 LYSMD2Q8IV50 215 aa5.19□□□□□ -1.58
USP54-213ENST00000481991 RNASE8Q8TDE3 154 aaKnown RBP5.19□□□□□ -1.58
USP54-213ENST00000481991 NTN5Q8WTR8 489 aaPredicted RBP5.19□□□□□ -1.58
USP54-213ENST00000481991 SLC35E1Q96K37 410 aa5.19□□□□□ -1.58
USP54-213ENST00000481991 SLC25A32Q9H2D1 315 aa5.19□□□□□ -1.58
USP54-213ENST00000481991 DUSP21Q9H596 190 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms